BLASTX nr result
ID: Bupleurum21_contig00003245
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00003245
(934 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263312.1| PREDICTED: uncharacterized protein LOC100261... 115 1e-23
ref|XP_001766808.1| predicted protein [Physcomitrella patens sub... 99 2e-18
ref|XP_001771487.1| predicted protein [Physcomitrella patens sub... 98 3e-18
ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [S... 91 3e-16
ref|XP_002326610.1| predicted protein [Populus trichocarpa] gi|2... 90 7e-16
>ref|XP_002263312.1| PREDICTED: uncharacterized protein LOC100261746 [Vitis vinifera]
Length = 751
Score = 115 bits (288), Expect = 1e-23
Identities = 81/258 (31%), Positives = 124/258 (48%), Gaps = 2/258 (0%)
Frame = +1
Query: 13 SSGCPVTAL-DLKIKSSNERIAANLYVGFLPQTIDDSRLRELFSPFGAITQSRVVTDQIT 189
SSG + + D + K + E A+LYVG+LPQT+D++ L ELF+PFG I +++V+ D+ T
Sbjct: 491 SSGLEIGSTPDTQSKPNKETSDADLYVGYLPQTMDENCLAELFAPFGKIAKTKVIKDRAT 550
Query: 190 GYSKGYGFVRFDTPTAASLAITYMDGYQIDGHRLAVRIAXXXXXXXXXXXXXXXINPIV- 366
G SKGYGFV+F+ P A+LA+++M GY+IDG LAVR ++P
Sbjct: 551 GISKGYGFVKFENPAHAALALSHMHGYKIDGKTLAVR-----EGTRQWVTGSSVLSPDPN 605
Query: 367 RPPAVATSLPALPHYVMPRAQVSIFDGEALGFSPSLNMDYSSQFPQTVAPVIPQRVSGSI 546
P ++A S A+ P S+ + + FP+T +P + +
Sbjct: 606 HPGSIAASQDAVRQTGFPVPPGSLLP------------QHQTMFPETKRMALPPPATYHL 653
Query: 547 GLRTTYSSDASVPMSTDTRTAFLPTGLLSRSTESRTALPSTGVVSSSAESKSTFLSTNGV 726
G + + F P + S +G ++ F S + +
Sbjct: 654 GPFDFFPKSKGL--------GFPPVSSILNSQ------GRSGFEYGYIATQVPFSSPSSL 699
Query: 727 SMFPGDPDYPGSGFQSYF 780
FPGDP YPGS F+SYF
Sbjct: 700 LQFPGDPSYPGSQFKSYF 717
>ref|XP_001766808.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682017|gb|EDQ68439.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 677
Score = 98.6 bits (244), Expect = 2e-18
Identities = 41/77 (53%), Positives = 62/77 (80%)
Frame = +1
Query: 76 ANLYVGFLPQTIDDSRLRELFSPFGAITQSRVVTDQITGYSKGYGFVRFDTPTAASLAIT 255
ANLYVG+LP T+DD L LF+PFGA+ ++V+ D++TG +KGYGFV+F P++A+ A+T
Sbjct: 450 ANLYVGYLPSTVDDEGLARLFAPFGAVEHAKVIRDRLTGVTKGYGFVKFSDPSSATAAVT 509
Query: 256 YMDGYQIDGHRLAVRIA 306
+ +GY+++G LAVR+A
Sbjct: 510 HRNGYRLEGRVLAVRVA 526
>ref|XP_001771487.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677214|gb|EDQ63687.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 774
Score = 97.8 bits (242), Expect = 3e-18
Identities = 41/77 (53%), Positives = 62/77 (80%)
Frame = +1
Query: 76 ANLYVGFLPQTIDDSRLRELFSPFGAITQSRVVTDQITGYSKGYGFVRFDTPTAASLAIT 255
ANLYVG+LP ++DD L LF+PFGA+ ++V+ D++TG SKGYGFV+F P++A+ A+T
Sbjct: 464 ANLYVGYLPSSVDDEGLARLFAPFGAVEHAKVIRDRLTGASKGYGFVKFSDPSSATAAVT 523
Query: 256 YMDGYQIDGHRLAVRIA 306
+ +GY+++G LAVR+A
Sbjct: 524 HRNGYRLEGRVLAVRVA 540
>ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
gi|241939976|gb|EES13121.1| hypothetical protein
SORBIDRAFT_06g033290 [Sorghum bicolor]
Length = 1076
Score = 91.3 bits (225), Expect = 3e-16
Identities = 44/76 (57%), Positives = 56/76 (73%)
Frame = +1
Query: 79 NLYVGFLPQTIDDSRLRELFSPFGAITQSRVVTDQITGYSKGYGFVRFDTPTAASLAITY 258
NLYVG+LP + +L ELF P G ITQ++VV D+ TG SKG+GFVRF +A+ AIT+
Sbjct: 815 NLYVGYLPPYVTTDKLIELFLPCGQITQAKVVVDKFTGVSKGFGFVRFADAYSAATAITH 874
Query: 259 MDGYQIDGHRLAVRIA 306
M+GY +DGH LAVR A
Sbjct: 875 MNGYPLDGHMLAVRTA 890
Score = 79.7 bits (195), Expect = 9e-13
Identities = 42/87 (48%), Positives = 56/87 (64%)
Frame = +1
Query: 46 KIKSSNERIAANLYVGFLPQTIDDSRLRELFSPFGAITQSRVVTDQITGYSKGYGFVRFD 225
K+K N NL+VG LP ++ +L ELF PFG I +SRVV D TG SKGYGFV++
Sbjct: 222 KLKEGN---GTNLFVGNLPPSLASHKLIELFLPFGRIVKSRVVDDCFTGSSKGYGFVQYS 278
Query: 226 TPTAASLAITYMDGYQIDGHRLAVRIA 306
P A+ AI +M+G ++G L VR+A
Sbjct: 279 DPRYAAEAIKHMNGRMVEGRMLEVRLA 305
Score = 73.6 bits (179), Expect = 6e-11
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +1
Query: 55 SSNERIAANLYVGFLPQTIDDSRLRELFSPFGAITQSRVVTDQITGYSKGYGFVRFDTPT 234
S+ E + LYV LP + + +L +LF P+G +T +V+ D TG SKGYGFVR+ P
Sbjct: 312 STKEMDMSKLYVCNLPLLLHEDKLHDLFVPYGQVTSVKVMRDHATGLSKGYGFVRYSDPQ 371
Query: 235 AASLAITYMDGYQIDGHRLAVRIA 306
A+ AI ++G+ I+G ++ VR+A
Sbjct: 372 HAAHAIFQLNGHLIEGKKMEVRVA 395
Score = 65.9 bits (159), Expect = 1e-08
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +1
Query: 76 ANLYVGFLPQTIDDSRLRELFSPFGAITQSRVVTDQITGYSKGYGFVRFDTPTAASLAIT 255
+N+YV LP ++ +L LF P+G +T ++V D +G SKGYGFV+F P A+ A+
Sbjct: 423 SNVYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAMDYTSGISKGYGFVKFSDPHDAAHAVI 482
Query: 256 YMDGYQIDGHRLAVRI 303
++G ++G ++ VR+
Sbjct: 483 ELNGCLVEGRKILVRV 498
Score = 64.7 bits (156), Expect = 3e-08
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +1
Query: 76 ANLYVGFLPQTIDDSRLRELFSPFGAITQSRVVTDQITGYSKGYGFVRFDTPTAASLAIT 255
+NLYV +P +++ ++L ELF PFG IT + VV +Q SKGYGFV+F A+ A+
Sbjct: 520 SNLYVCNIPSSMNKAKLVELFLPFGRITHAMVV-EQSNNSSKGYGFVKFADSHCAAEAVA 578
Query: 256 YMDGYQIDGHRLAVRIA 306
M+G I+G ++VR+A
Sbjct: 579 MMNGALIEGETISVRVA 595
Score = 58.5 bits (140), Expect = 2e-06
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +1
Query: 76 ANLYVGFLPQTIDDSRLRELFSPFGAITQSRVVTDQITGYSKGYGFVRFDTPTAASLAIT 255
ANLYVG +P + +L ++F +G I Q++ + GYG +R+ ++A+ AI
Sbjct: 717 ANLYVGRVPSAVTCEQLVQIFCLYGEIVQAKK-------FDAGYGMIRYANASSAAAAID 769
Query: 256 YMDGYQIDGHRLAVRIA 306
++DGYQI G L VR+A
Sbjct: 770 HLDGYQIGGSTLVVRVA 786
>ref|XP_002326610.1| predicted protein [Populus trichocarpa] gi|222833932|gb|EEE72409.1|
predicted protein [Populus trichocarpa]
Length = 704
Score = 90.1 bits (222), Expect = 7e-16
Identities = 51/126 (40%), Positives = 71/126 (56%)
Frame = +1
Query: 43 LKIKSSNERIAANLYVGFLPQTIDDSRLRELFSPFGAITQSRVVTDQITGYSKGYGFVRF 222
LK+K ++ NLY+G+LP +DD L LFS FG I ++V+ D+ITG SKGYGFV++
Sbjct: 418 LKLKEYDD---TNLYIGYLPPNLDDDGLIGLFSSFGEIVMAKVIKDRITGLSKGYGFVKY 474
Query: 223 DTPTAASLAITYMDGYQIDGHRLAVRIAXXXXXXXXXXXXXXXINPIVRPPAVATSLPAL 402
A+ AI M+GY+IDG +AVR+A P V P A+++PA
Sbjct: 475 RDVQMANNAIASMNGYRIDGRTIAVRVAGKPP------------QPTVPPGPPASTMPAY 522
Query: 403 PHYVMP 420
P P
Sbjct: 523 PVSTQP 528