BLASTX nr result

ID: Bupleurum21_contig00003221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003221
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519372.1| ATP synthase alpha subunit mitochondrial, pu...   292   5e-77
gb|AFY26897.1| PHD5 [Morella rubra]                                   290   2e-76
ref|XP_003550325.1| PREDICTED: PHD finger protein Alfin1-like is...   286   3e-75
ref|XP_002271574.1| PREDICTED: PHD finger protein Alfin1 [Vitis ...   284   1e-74
ref|XP_004133741.1| PREDICTED: PHD finger protein Alfin1-like [C...   284   1e-74

>ref|XP_002519372.1| ATP synthase alpha subunit mitochondrial, putative [Ricinus
           communis] gi|223541439|gb|EEF42989.1| ATP synthase alpha
           subunit mitochondrial, putative [Ricinus communis]
          Length = 367

 Score =  292 bits (747), Expect = 5e-77
 Identities = 147/232 (63%), Positives = 166/232 (71%), Gaps = 3/232 (1%)
 Frame = -1

Query: 688 VDEVFIDFRGRRAGVIKALTSDVEKFFKECDPEKDNLCLYGLPNEKWXXXXXXXXXXXXX 509
           V+EVF DF+GRR+G+IKALTSDVEKF+++CDPEK+NLCLYGLPNE W             
Sbjct: 125 VEEVFSDFKGRRSGLIKALTSDVEKFYQQCDPEKENLCLYGLPNETWEVNLPVEEVPPEL 184

Query: 508 XXPALGINFARDGMQDKDWLSLVAVHSDSWLLSVXXXXXXXXXXXYNERKRLFHLINELP 329
             PALGINFARDGMQ+KDWLSLVAVHSDSWLL+V            NERKRLF +INELP
Sbjct: 185 PEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINELP 244

Query: 328 TVYEVVSGAVVPSKE--ATRSNGNKIKSNGNV-SRAQEPHIKAVKKTPPVKXXXXXXXXX 158
           T++EVVSG V  +K+  AT +N  K KS G + SR  EP  KAVK TPP K         
Sbjct: 245 TIFEVVSGNVKQAKDQSATHNNSGKSKSTGKMQSRQPEPPTKAVKMTPPAKEEDESGEEE 304

Query: 157 XXXXXXGATCGACGDDYDGDEFWICCDVCEKWFHGKCVKITPAKAEHIKQYK 2
                 GATCGACG+ Y  DEFWICCDVCE+WFHGKCVKITPAKAEHIKQYK
Sbjct: 305 EEDDEQGATCGACGESYGTDEFWICCDVCERWFHGKCVKITPAKAEHIKQYK 356


>gb|AFY26897.1| PHD5 [Morella rubra]
          Length = 252

 Score =  290 bits (741), Expect = 2e-76
 Identities = 142/230 (61%), Positives = 164/230 (71%), Gaps = 1/230 (0%)
 Frame = -1

Query: 688 VDEVFIDFRGRRAGVIKALTSDVEKFFKECDPEKDNLCLYGLPNEKWXXXXXXXXXXXXX 509
           V+EVF DF+GRRAG+IKALT+DV+KF+++CDPEK+NLCLYGLPNE W             
Sbjct: 12  VEEVFQDFKGRRAGLIKALTTDVDKFYQQCDPEKENLCLYGLPNETWDVNLPVEEVPPEL 71

Query: 508 XXPALGINFARDGMQDKDWLSLVAVHSDSWLLSVXXXXXXXXXXXYNERKRLFHLINELP 329
             PALGINFARDGMQ+KDWLSLVAVHSDSWLL+V            NERKRLF +INELP
Sbjct: 72  PEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINELP 131

Query: 328 TVYEVVSGAVV-PSKEATRSNGNKIKSNGNVSRAQEPHIKAVKKTPPVKXXXXXXXXXXX 152
           T++EVV+G V  P  ++   N +K KS+G  SR  EP  K VK +PP K           
Sbjct: 132 TIFEVVTGNVKQPKDQSATHNSSKSKSSGKASRQTEPQAKGVKMSPPPKEEDESGEEEEE 191

Query: 151 XXXXGATCGACGDDYDGDEFWICCDVCEKWFHGKCVKITPAKAEHIKQYK 2
               GATCGACGD+Y  DEFWICCDVCE+WFHGKCVKITPAKAEHIKQYK
Sbjct: 192 DDEQGATCGACGDNYGTDEFWICCDVCERWFHGKCVKITPAKAEHIKQYK 241


>ref|XP_003550325.1| PREDICTED: PHD finger protein Alfin1-like isoform 1 [Glycine max]
          Length = 253

 Score =  286 bits (731), Expect = 3e-75
 Identities = 139/231 (60%), Positives = 165/231 (71%), Gaps = 2/231 (0%)
 Frame = -1

Query: 688 VDEVFIDFRGRRAGVIKALTSDVEKFFKECDPEKDNLCLYGLPNEKWXXXXXXXXXXXXX 509
           V+EVF DF+GRRAG+IKALT+DVEKF+++CDPEK+NLCLYG PNE W             
Sbjct: 12  VEEVFTDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGFPNETWEVNLPVEEVPPEL 71

Query: 508 XXPALGINFARDGMQDKDWLSLVAVHSDSWLLSVXXXXXXXXXXXYNERKRLFHLINELP 329
             PALGINFARDGMQ+KDWLSLVAVHSDSWLL+V            NERKRLF +IN+LP
Sbjct: 72  PEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLP 131

Query: 328 TVYEVVSGAVVPSKE--ATRSNGNKIKSNGNVSRAQEPHIKAVKKTPPVKXXXXXXXXXX 155
           T++E+V+G+   SK+  A  +NG+K KS+G VSR  E   K +K + P K          
Sbjct: 132 TIFELVTGSARQSKDQPAAHNNGSKCKSSGKVSRQSESQAKGMKMSAPPKEEDESGEEEE 191

Query: 154 XXXXXGATCGACGDDYDGDEFWICCDVCEKWFHGKCVKITPAKAEHIKQYK 2
                GATCGACGD+Y  DEFWICCD+CE+WFHGKCVKITPAKAEHIKQYK
Sbjct: 192 EDDEQGATCGACGDNYGTDEFWICCDMCERWFHGKCVKITPAKAEHIKQYK 242


>ref|XP_002271574.1| PREDICTED: PHD finger protein Alfin1 [Vitis vinifera]
           gi|297739439|emb|CBI29621.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score =  284 bits (727), Expect = 1e-74
 Identities = 140/230 (60%), Positives = 161/230 (70%), Gaps = 1/230 (0%)
 Frame = -1

Query: 688 VDEVFIDFRGRRAGVIKALTSDVEKFFKECDPEKDNLCLYGLPNEKWXXXXXXXXXXXXX 509
           V+EVF D+RGRRAG+IKALT++VEKF+++CDPEK+NLCLYGLPNE W             
Sbjct: 13  VEEVFSDYRGRRAGLIKALTTEVEKFYQQCDPEKENLCLYGLPNETWEVNLPVEEVPPEL 72

Query: 508 XXPALGINFARDGMQDKDWLSLVAVHSDSWLLSVXXXXXXXXXXXYNERKRLFHLINELP 329
             PALGINFARDGMQ+KDWLSLVAVHSDSWLL+V            +ERKRLF +INELP
Sbjct: 73  PEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKSERKRLFQMINELP 132

Query: 328 TVYEVVSGAVVP-SKEATRSNGNKIKSNGNVSRAQEPHIKAVKKTPPVKXXXXXXXXXXX 152
           T++EVV+G           +N NK KS+G +SR  EP  K VK +PP K           
Sbjct: 133 TIFEVVTGVKQQRDMSGNHNNSNKSKSSGKMSRQPEPQTKGVKVSPPSKEEDESGDEDAE 192

Query: 151 XXXXGATCGACGDDYDGDEFWICCDVCEKWFHGKCVKITPAKAEHIKQYK 2
               GA CGACGD+Y  DEFWICCDVCEKWFHGKCVKITPAKAEHIKQYK
Sbjct: 193 DDEQGAICGACGDNYANDEFWICCDVCEKWFHGKCVKITPAKAEHIKQYK 242


>ref|XP_004133741.1| PREDICTED: PHD finger protein Alfin1-like [Cucumis sativus]
           gi|449522474|ref|XP_004168251.1| PREDICTED: PHD finger
           protein Alfin1-like [Cucumis sativus]
          Length = 255

 Score =  284 bits (726), Expect = 1e-74
 Identities = 142/233 (60%), Positives = 165/233 (70%), Gaps = 4/233 (1%)
 Frame = -1

Query: 688 VDEVFIDFRGRRAGVIKALTSDVEKFFKECDPEKDNLCLYGLPNEKWXXXXXXXXXXXXX 509
           V+EV+ DF+GRRAG+IKALT+DVEKF+++CDPEK+NLCLYGLPNE W             
Sbjct: 12  VEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPVEEVPPEL 71

Query: 508 XXPALGINFARDGMQDKDWLSLVAVHSDSWLLSVXXXXXXXXXXXYNERKRLFHLINELP 329
             PALGINFARDGMQ+KDWLSLVAVHSDSWLL+V             ERKRLF +IN+LP
Sbjct: 72  PEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKTERKRLFQMINDLP 131

Query: 328 TVYEVVSGAVVPSKE--ATRSNGNKIKSNGNVSRAQEPHIKAVKKTPPVKXXXXXXXXXX 155
           +V+EVV+G    SKE  AT +NG+K KS+G +SR  E H K VK +PP K          
Sbjct: 132 SVFEVVTGNGKQSKEQSATHNNGSKSKSSGKMSRQLESHSKGVKMSPPPKEDEDSGDEEE 191

Query: 154 XXXXXG--ATCGACGDDYDGDEFWICCDVCEKWFHGKCVKITPAKAEHIKQYK 2
                   ATCGACGD+Y  DEFWICCD CE+WFHGKCVKITPAKAEHIKQYK
Sbjct: 192 EEEDDEQGATCGACGDNYGNDEFWICCDACERWFHGKCVKITPAKAEHIKQYK 244


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