BLASTX nr result

ID: Bupleurum21_contig00003219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003219
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632306.1| PREDICTED: uncharacterized protein LOC100855...   105   5e-27
ref|XP_002302107.1| predicted protein [Populus trichocarpa] gi|2...    95   3e-25
ref|XP_002306781.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-24
ref|XP_004158617.1| PREDICTED: uncharacterized LOC101223034 [Cuc...    91   9e-23
ref|XP_004140095.1| PREDICTED: uncharacterized protein LOC101223...    91   9e-23

>ref|XP_003632306.1| PREDICTED: uncharacterized protein LOC100855240 [Vitis vinifera]
          Length = 196

 Score =  105 bits (261), Expect(2) = 5e-27
 Identities = 75/179 (41%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
 Frame = -2

Query: 1028 CRTFQSGAGILPTPIKACTTPEGKWGFGFSPFS-KTSLPAFNDYFSEDTXXXXXXXXXXX 852
            CRTF+SGAGILPTP+KACTTP  K   G  P S KT  P   D     T           
Sbjct: 39   CRTFESGAGILPTPLKACTTPVAK---GACPLSQKTPSPHSEDSKQAKT---------TG 86

Query: 851  XXXXXXXXXXIRGDFERERSLFSDDFCYSELWAGXXXXXXXXXXXXXXPKFFTPPKRTVS 672
                         ++E+    F DDF Y ELWAG              PKF   PKRTVS
Sbjct: 87   KSSAIAIPFAEASNYEKS---FHDDFSYCELWAGPAYSNSPPPSSLPIPKFSMRPKRTVS 143

Query: 671  CDFPSSSVTRMDLHPIARSAPPSPKREHNVSARKLFHGADHAIATQDLRRILNLDMTDD 495
             D P S+   + +H IA+SAPPSP RE   S R          AT++LRRILNL++ DD
Sbjct: 144  LDLPGSAPV-IKMHAIAKSAPPSPTREPYPSPRDFTD-----FATKNLRRILNLNIADD 196



 Score = 43.5 bits (101), Expect(2) = 5e-27
 Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 5/46 (10%)
 Frame = -1

Query: 1233 METIVVVAHHRNQCYEKNNSNLGSPTF-----RDFKELSCRTFQSG 1111
            MET++VV  HRNQ Y ++ ++ GS  F      DF+E++CRTF+SG
Sbjct: 1    METLLVVPQHRNQYYGRSKAH-GSDRFVSSPSSDFREINCRTFESG 45


>ref|XP_002302107.1| predicted protein [Populus trichocarpa] gi|222843833|gb|EEE81380.1|
            predicted protein [Populus trichocarpa]
          Length = 220

 Score = 95.1 bits (235), Expect(2) = 3e-25
 Identities = 69/184 (37%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
 Frame = -2

Query: 1028 CRTFQSGAGILPTPIKACTTPEGKWGFGFSPFS---KTSLPAFNDYFSEDTXXXXXXXXX 858
            CRTFQS  GILPTP +A TT   K      P S   KT  PA    F+            
Sbjct: 39   CRTFQSRDGILPTPFQASTTTVTKITSHVPPTSNSPKTPPPAIKSQFNSHPVDNGNFKTI 98

Query: 857  XXXXXXXXXXXXIRGD--FERERSLFSDDFCYSELWAGXXXXXXXXXXXXXXPKF-FTPP 687
                         R +  F  +    +++  +SE WAG              PKF   PP
Sbjct: 99   SKSSPITINVTVPRKETSFYEDMGFGNENLPFSERWAGPAYSNSPPPSSLPIPKFSMRPP 158

Query: 686  KRTVSCDFPSSSVTRMDLHPIARSAPPSPKREHNVSARKLFHGADHAIATQDLRRILNLD 507
            KRTVS D P +  T  ++ P A+SAP SP REH+ S + LF  AD   AT+ LRRILNLD
Sbjct: 159  KRTVSLDLPVNHGTDFNVQPTAKSAPASPSREHSPSMKDLFLSADS--ATKTLRRILNLD 216

Query: 506  MTDD 495
            + D+
Sbjct: 217  VADE 220



 Score = 47.8 bits (112), Expect(2) = 3e-25
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
 Frame = -1

Query: 1233 METIVVVAHHRNQCYEKNNSN----LGSPTFRDFKELSCRTFQS 1114
            MET+VVVA HRNQ Y K  SN     G+   + FK+++CRTFQS
Sbjct: 1    METLVVVAQHRNQYYTKVRSNGPAKFGTSPSKHFKDINCRTFQS 44


>ref|XP_002306781.1| predicted protein [Populus trichocarpa] gi|222856230|gb|EEE93777.1|
            predicted protein [Populus trichocarpa]
          Length = 219

 Score = 95.9 bits (237), Expect(2) = 2e-24
 Identities = 70/184 (38%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
 Frame = -2

Query: 1028 CRTFQSGAGILPTPIKACTTPEGKWGFGFSPFS---KTSLPAFNDYFSEDTXXXXXXXXX 858
            CRTFQSGAG+LPTP +  TTP  K     +P S   KT  PA   + +  +         
Sbjct: 39   CRTFQSGAGLLPTPFQTSTTPVTK-STTLAPASHSPKTPSPAVKFHSNSHSVDNGRLKTA 97

Query: 857  XXXXXXXXXXXXIRGD--FERERSLFSDDFCYSELWAGXXXXXXXXXXXXXXPKF-FTPP 687
                         R +  F       + +  +SELWAG              PKF   PP
Sbjct: 98   SKSSPITFNVKISRKETSFNEAIGFVNGNLPFSELWAGPAYSNSPPPSSLPIPKFSMRPP 157

Query: 686  KRTVSCDFPSSSVTRMDLHPIARSAPPSPKREHNVSARKLFHGADHAIATQDLRRILNLD 507
            KRTVS D P S     D+ P A+SAP SP REH+ S R L   AD   AT+ LRRILNLD
Sbjct: 158  KRTVSLDLPVSDDADFDVQPTAKSAPASPSREHSPSIRDLLLSADS--ATKTLRRILNLD 215

Query: 506  MTDD 495
            +  +
Sbjct: 216  VAGE 219



 Score = 43.9 bits (102), Expect(2) = 2e-24
 Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
 Frame = -1

Query: 1233 METIVVVAHHRNQCYE----KNNSNLGSPTFRDFKELSCRTFQSG 1111
            MET+VVVA HRNQ Y        +  G+   + F++++CRTFQSG
Sbjct: 1    METLVVVAEHRNQYYSGVEPHGPAKFGASPSKHFRDINCRTFQSG 45


>ref|XP_004158617.1| PREDICTED: uncharacterized LOC101223034 [Cucumis sativus]
          Length = 204

 Score = 91.3 bits (225), Expect(2) = 9e-23
 Identities = 67/178 (37%), Positives = 81/178 (45%)
 Frame = -2

Query: 1028 CRTFQSGAGILPTPIKACTTPEGKWGFGFSPFSKTSLPAFNDYFSEDTXXXXXXXXXXXX 849
            CR+FQSGAGILPTP+KAC +        F P  KT  P      S               
Sbjct: 39   CRSFQSGAGILPTPLKACNSETEH----FYPSPKTPPPCLT---SNSENRKQLATMRSTP 91

Query: 848  XXXXXXXXXIRGDFERERSLFSDDFCYSELWAGXXXXXXXXXXXXXXPKFFTPPKRTVSC 669
                         F  E   +   F +SELWAG              PKF +  KRT S 
Sbjct: 92   IPIKPKSSNQSNAFHEE--FYDRSFSFSELWAGPTYSNSPPPSSLPIPKF-SVAKRTTSL 148

Query: 668  DFPSSSVTRMDLHPIARSAPPSPKREHNVSARKLFHGADHAIATQDLRRILNLDMTDD 495
            +   S+      HP A+SAPPSP R+ N SAR  FH AD   AT+ LRRILNLD+ ++
Sbjct: 149  ELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADS--ATKTLRRILNLDVANE 204



 Score = 43.1 bits (100), Expect(2) = 9e-23
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
 Frame = -1

Query: 1233 METIVVVAHHRNQCYEK----NNSNLGSPTFRDFKELSCRTFQSG 1111
            ME +VV+  HRNQ Y++      +  GS   RDF+ ++CR+FQSG
Sbjct: 1    MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSG 45


>ref|XP_004140095.1| PREDICTED: uncharacterized protein LOC101223034 [Cucumis sativus]
          Length = 204

 Score = 91.3 bits (225), Expect(2) = 9e-23
 Identities = 67/178 (37%), Positives = 81/178 (45%)
 Frame = -2

Query: 1028 CRTFQSGAGILPTPIKACTTPEGKWGFGFSPFSKTSLPAFNDYFSEDTXXXXXXXXXXXX 849
            CR+FQSGAGILPTP+KAC +        F P  KT  P      S               
Sbjct: 39   CRSFQSGAGILPTPLKACNSETEH----FYPSPKTPPPCLT---SNSENRKQLATMRSAP 91

Query: 848  XXXXXXXXXIRGDFERERSLFSDDFCYSELWAGXXXXXXXXXXXXXXPKFFTPPKRTVSC 669
                         F  E   +   F +SELWAG              PKF +  KRT S 
Sbjct: 92   IPIKPKSSNQSNAFHEE--FYDRSFSFSELWAGPTYSNSPPPSSLPIPKF-SVAKRTTSL 148

Query: 668  DFPSSSVTRMDLHPIARSAPPSPKREHNVSARKLFHGADHAIATQDLRRILNLDMTDD 495
            +   S+      HP A+SAPPSP R+ N SAR  FH AD   AT+ LRRILNLD+ ++
Sbjct: 149  ELARSAPEFEMHHPSAKSAPPSPTRDQNFSARFFFHSADS--ATKTLRRILNLDVANE 204



 Score = 43.1 bits (100), Expect(2) = 9e-23
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
 Frame = -1

Query: 1233 METIVVVAHHRNQCYEK----NNSNLGSPTFRDFKELSCRTFQSG 1111
            ME +VV+  HRNQ Y++      +  GS   RDF+ ++CR+FQSG
Sbjct: 1    MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSG 45


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