BLASTX nr result

ID: Bupleurum21_contig00003211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003211
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI14813.1| chloroplast carbonic anhydrase [Pachysandra termi...    80   1e-13
ref|XP_002882178.1| hypothetical protein ARALYDRAFT_477371 [Arab...    79   3e-13
dbj|BAH56801.1| AT3G01500 [Arabidopsis thaliana]                       79   4e-13
ref|NP_186799.2| carbonic anhydrase 1 [Arabidopsis thaliana] gi|...    79   4e-13
ref|NP_850491.1| carbonic anhydrase 1 [Arabidopsis thaliana] gi|...    79   4e-13

>gb|ABI14813.1| chloroplast carbonic anhydrase [Pachysandra terminalis]
          Length = 324

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 53/128 (41%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
 Frame = +3

Query: 30  PSAFARIXXXXXXXXXXXXXXXLIRNEPVFAAPAPLITXXXXXXXXXXXXXXXXXXXXXX 209
           PS FAR+               LIR EPVFAAPAP IT                      
Sbjct: 29  PSIFARLNSASPPPPLPS----LIRKEPVFAAPAPYITPNLREDMGKDSYEEAIAGLKKL 84

Query: 210 XXXXXXXXXXXXXXXXXXX--------KGFDPVERLKTGFIKFKKEKYETNPALYDELSK 365
                                      K FDP+ER+KTGFI FKKEKYETNPAL+ EL+K
Sbjct: 85  LSEKGDLDAVAAAKIEQITAELQTTESKAFDPIERMKTGFIHFKKEKYETNPALFGELAK 144

Query: 366 GQSPKFMV 389
           GQSPKFMV
Sbjct: 145 GQSPKFMV 152


>ref|XP_002882178.1| hypothetical protein ARALYDRAFT_477371 [Arabidopsis lyrata subsp.
           lyrata] gi|297328018|gb|EFH58437.1| hypothetical protein
           ARALYDRAFT_477371 [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 48/109 (44%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
 Frame = +3

Query: 96  LIRNEPVFAAPAPLITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 266
           LIRNEPVFAAPAP+I                                             
Sbjct: 55  LIRNEPVFAAPAPIIAPYWSEEMGSDAYEEAIEALKKLLIEKEELKTVAAAKVEQITAAL 114

Query: 267 --------KGFDPVERLKTGFIKFKKEKYETNPALYDELSKGQSPKFMV 389
                   K FDPVE +K GFIKFKKEKYETNPALY EL+KGQSPK+MV
Sbjct: 115 QTGTSSDKKAFDPVENIKQGFIKFKKEKYETNPALYGELAKGQSPKYMV 163


>dbj|BAH56801.1| AT3G01500 [Arabidopsis thaliana]
          Length = 290

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 48/109 (44%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
 Frame = +3

Query: 96  LIRNEPVFAAPAPLITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 266
           LIRNEPVFAAPAP+I                                             
Sbjct: 56  LIRNEPVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAAL 115

Query: 267 --------KGFDPVERLKTGFIKFKKEKYETNPALYDELSKGQSPKFMV 389
                   K FDPVE +K GFIKFKKEKYETNPALY EL+KGQSPK+MV
Sbjct: 116 QTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMV 164


>ref|NP_186799.2| carbonic anhydrase 1 [Arabidopsis thaliana]
           gi|38503395|sp|P27140.2|CAHC_ARATH RecName:
           Full=Carbonic anhydrase, chloroplastic; AltName:
           Full=Carbonate dehydratase; Flags: Precursor
           gi|16226255|gb|AAL16116.1|AF428284_1 AT3g01500/F4P13_5
           [Arabidopsis thaliana]
           gi|16226669|gb|AAL16228.1|AF428459_1 AT3g01500/F4P13_5
           [Arabidopsis thaliana] gi|332640154|gb|AEE73675.1|
           carbonic anhydrase 1 [Arabidopsis thaliana]
          Length = 347

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 48/109 (44%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
 Frame = +3

Query: 96  LIRNEPVFAAPAPLITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 266
           LIRNEPVFAAPAP+I                                             
Sbjct: 56  LIRNEPVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAAL 115

Query: 267 --------KGFDPVERLKTGFIKFKKEKYETNPALYDELSKGQSPKFMV 389
                   K FDPVE +K GFIKFKKEKYETNPALY EL+KGQSPK+MV
Sbjct: 116 QTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMV 164


>ref|NP_850491.1| carbonic anhydrase 1 [Arabidopsis thaliana]
           gi|6016709|gb|AAF01535.1|AC009325_5 carbonic anhydrase,
           chloroplast precursor [Arabidopsis thaliana]
           gi|14343|emb|CAA46508.1| carbonic anhydrase [Arabidopsis
           thaliana] gi|15810273|gb|AAL07024.1| putative carbonic
           anhydrase, chloroplast precursor [Arabidopsis thaliana]
           gi|17065418|gb|AAL32863.1| carbonic anhydrase,
           chloroplast precursor [Arabidopsis thaliana]
           gi|20148659|gb|AAM10220.1| carbonic anhydrase,
           chloroplast precursor [Arabidopsis thaliana]
           gi|110740990|dbj|BAE98589.1| carbonic anhydrase,
           chloroplast precursor [Arabidopsis thaliana]
           gi|332640156|gb|AEE73677.1| carbonic anhydrase 1
           [Arabidopsis thaliana]
          Length = 336

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 48/109 (44%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
 Frame = +3

Query: 96  LIRNEPVFAAPAPLITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 266
           LIRNEPVFAAPAP+I                                             
Sbjct: 56  LIRNEPVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAAL 115

Query: 267 --------KGFDPVERLKTGFIKFKKEKYETNPALYDELSKGQSPKFMV 389
                   K FDPVE +K GFIKFKKEKYETNPALY EL+KGQSPK+MV
Sbjct: 116 QTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMV 164


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