BLASTX nr result

ID: Bupleurum21_contig00003193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003193
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71047.1| hypothetical protein VITISV_015116 [Vitis vinifera]   292   4e-77
ref|XP_002281267.2| PREDICTED: F-box/kelch-repeat protein At2g44...   291   7e-77
ref|XP_002309282.1| f-box family protein [Populus trichocarpa] g...   277   1e-72
ref|XP_002297641.1| predicted protein [Populus trichocarpa] gi|2...   268   5e-70
ref|XP_004142165.1| PREDICTED: F-box/kelch-repeat protein At2g44...   266   3e-69

>emb|CAN71047.1| hypothetical protein VITISV_015116 [Vitis vinifera]
          Length = 343

 Score =  292 bits (747), Expect = 4e-77
 Identities = 133/187 (71%), Positives = 155/187 (82%)
 Frame = +1

Query: 79  FTELIPGLPEEIALDCLTRLHFSAHRVGSQVCHRWRQLLRSKDFYYHRRQSGQTRKAACL 258
           FTELIPGLPEEIAL+C TRL +++HRV +QVC RW +LL+ K+FYY R+Q+G T KAACL
Sbjct: 4   FTELIPGLPEEIALECFTRLPYTSHRVAAQVCRRWGELLQGKEFYYXRKQTGFTHKAACL 63

Query: 259 VQSLPVKSEGTGSKPAGQPRYGVSVFDPVSGLWDRVDPVPKYPDGLPLFCQVASSEGKLV 438
           VQ+LPV SE  G KP   P YG+SVFD VS  W+R+ PVPKYPDGLPLFCQV SSEGKLV
Sbjct: 64  VQALPVLSESDGRKPVRPPSYGISVFDSVSRTWERIAPVPKYPDGLPLFCQVTSSEGKLV 123

Query: 439 LMGGWDPASWEPVRDVFSYDFTTGRWTQCRDMPSSRSFFAVGAAEGKVYVAGGHDDSKNA 618
           +MGGWDP S++PV+DVF YDFTT RW Q RDMPS RSFFA G  EG+++VAGGHDDSKNA
Sbjct: 124 VMGGWDPESYDPVKDVFVYDFTTRRWKQGRDMPSKRSFFAAGELEGRIFVAGGHDDSKNA 183

Query: 619 LKSAWVY 639
           L +AWVY
Sbjct: 184 LSTAWVY 190


>ref|XP_002281267.2| PREDICTED: F-box/kelch-repeat protein At2g44130 [Vitis vinifera]
          Length = 355

 Score =  291 bits (745), Expect = 7e-77
 Identities = 133/187 (71%), Positives = 155/187 (82%)
 Frame = +1

Query: 79  FTELIPGLPEEIALDCLTRLHFSAHRVGSQVCHRWRQLLRSKDFYYHRRQSGQTRKAACL 258
           FTELIPGLPEEIAL+C TRL +++HRV +QVC RW +LL+ K+FYY R+Q+G T KAACL
Sbjct: 16  FTELIPGLPEEIALECFTRLPYTSHRVAAQVCRRWGELLQGKEFYYLRKQTGFTHKAACL 75

Query: 259 VQSLPVKSEGTGSKPAGQPRYGVSVFDPVSGLWDRVDPVPKYPDGLPLFCQVASSEGKLV 438
           VQ+LPV SE  G KP   P YG+SVFD VS  W+R+ PVPKYPDGLPLFCQV SSEGKLV
Sbjct: 76  VQALPVLSESDGRKPVRPPSYGISVFDSVSRTWERIAPVPKYPDGLPLFCQVTSSEGKLV 135

Query: 439 LMGGWDPASWEPVRDVFSYDFTTGRWTQCRDMPSSRSFFAVGAAEGKVYVAGGHDDSKNA 618
           +MGGWDP S++PV+DVF YDFTT RW Q RDMPS RSFFA G  EG+++VAGGHDDSKNA
Sbjct: 136 VMGGWDPESYDPVKDVFVYDFTTRRWKQGRDMPSKRSFFAAGELEGRIFVAGGHDDSKNA 195

Query: 619 LKSAWVY 639
           L +AWVY
Sbjct: 196 LSTAWVY 202


>ref|XP_002309282.1| f-box family protein [Populus trichocarpa]
           gi|222855258|gb|EEE92805.1| f-box family protein
           [Populus trichocarpa]
          Length = 337

 Score =  277 bits (708), Expect = 1e-72
 Identities = 121/186 (65%), Positives = 153/186 (82%)
 Frame = +1

Query: 82  TELIPGLPEEIALDCLTRLHFSAHRVGSQVCHRWRQLLRSKDFYYHRRQSGQTRKAACLV 261
           TELIP LP+EIAL+CL RLH++ HRV SQVC RWR +L+S+DFYY R+Q+G T KAACL+
Sbjct: 2   TELIPSLPDEIALECLFRLHYTTHRVASQVCKRWRPVLQSRDFYYQRKQNGLTHKAACLI 61

Query: 262 QSLPVKSEGTGSKPAGQPRYGVSVFDPVSGLWDRVDPVPKYPDGLPLFCQVASSEGKLVL 441
           Q++P ++  +  KP G P+YGVS+FD V+G WDRVDPVP YPDGLPLFCQV SSEGKLVL
Sbjct: 62  QAIPDQNGSSQPKPIGPPKYGVSIFDSVNGSWDRVDPVPAYPDGLPLFCQVTSSEGKLVL 121

Query: 442 MGGWDPASWEPVRDVFSYDFTTGRWTQCRDMPSSRSFFAVGAAEGKVYVAGGHDDSKNAL 621
           +GGWDP  +EP+  VF Y+FTT +W + +DMP +RSFFAVG   G++ +AGGHD++KNAL
Sbjct: 122 LGGWDPVKYEPLSQVFVYEFTTRQWRRGKDMPENRSFFAVGELNGRIIIAGGHDENKNAL 181

Query: 622 KSAWVY 639
           K+AWVY
Sbjct: 182 KTAWVY 187


>ref|XP_002297641.1| predicted protein [Populus trichocarpa] gi|222844899|gb|EEE82446.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  268 bits (686), Expect = 5e-70
 Identities = 119/190 (62%), Positives = 148/190 (77%)
 Frame = +1

Query: 70  SQLFTELIPGLPEEIALDCLTRLHFSAHRVGSQVCHRWRQLLRSKDFYYHRRQSGQTRKA 249
           S LFTE IP LP+E+ L+C+TRL ++AHRV SQVC +WR+LL SKDFYYHR++ G T K 
Sbjct: 3   STLFTEFIPSLPQELGLECMTRLPYTAHRVASQVCKQWRELLESKDFYYHRKKLGYTHKV 62

Query: 250 ACLVQSLPVKSEGTGSKPAGQPRYGVSVFDPVSGLWDRVDPVPKYPDGLPLFCQVASSEG 429
           ACLVQ+        GSKP   P +G++VFD VS  W R+DPVPKYP+GLPLFCQ+AS EG
Sbjct: 63  ACLVQAAHRADVSQGSKPGNSPSFGITVFDSVSQTWQRLDPVPKYPNGLPLFCQLASCEG 122

Query: 430 KLVLMGGWDPASWEPVRDVFSYDFTTGRWTQCRDMPSSRSFFAVGAAEGKVYVAGGHDDS 609
           KLV+MGGWDP S+E V  VF YDFTT +W + ++MPS RSFFA+GA  G++YV GGHD++
Sbjct: 123 KLVVMGGWDPVSYEQVSHVFVYDFTTRKWREGKEMPSKRSFFAIGAYSGRIYVVGGHDEN 182

Query: 610 KNALKSAWVY 639
           KNALK+ WVY
Sbjct: 183 KNALKTGWVY 192


>ref|XP_004142165.1| PREDICTED: F-box/kelch-repeat protein At2g44130-like [Cucumis
           sativus]
          Length = 347

 Score =  266 bits (679), Expect = 3e-69
 Identities = 116/187 (62%), Positives = 150/187 (80%)
 Frame = +1

Query: 79  FTELIPGLPEEIALDCLTRLHFSAHRVGSQVCHRWRQLLRSKDFYYHRRQSGQTRKAACL 258
           FTE IPGLPEE++LDC+TRL +++HR+ S VC RW+QL+ S DFYYHRR+SG T   +C 
Sbjct: 8   FTEFIPGLPEELSLDCITRLPYTSHRLASAVCRRWQQLISSPDFYYHRRKSGATTLLSCF 67

Query: 259 VQSLPVKSEGTGSKPAGQPRYGVSVFDPVSGLWDRVDPVPKYPDGLPLFCQVASSEGKLV 438
           +Q+LP     TG K      YG++VFD +S  WDR+  +P+YPDGLPLFC +AS+EGKLV
Sbjct: 68  IQALPPAFSTTGWKLCTSLAYGLTVFDSLSQSWDRIPSIPQYPDGLPLFCHIASTEGKLV 127

Query: 439 LMGGWDPASWEPVRDVFSYDFTTGRWTQCRDMPSSRSFFAVGAAEGKVYVAGGHDDSKNA 618
           LMGGWDPA+++P+ DVF YDFT G W + +DMPS RSFFA+GA++G+VY++GGHD+SKNA
Sbjct: 128 LMGGWDPATYDPIIDVFVYDFTQGAWRKGKDMPSKRSFFAIGASDGRVYISGGHDESKNA 187

Query: 619 LKSAWVY 639
           LKSAWVY
Sbjct: 188 LKSAWVY 194


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