BLASTX nr result

ID: Bupleurum21_contig00003185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003185
         (1209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21237.3| unnamed protein product [Vitis vinifera]              318   2e-84
ref|XP_002278321.1| PREDICTED: OTU domain-containing protein DDB...   317   3e-84
ref|XP_002320400.1| predicted protein [Populus trichocarpa] gi|2...   303   4e-80
ref|NP_186856.1| cysteine proteinase-like protein [Arabidopsis t...   301   3e-79
ref|XP_004145623.1| PREDICTED: OTU domain-containing protein DDB...   298   1e-78

>emb|CBI21237.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score =  318 bits (814), Expect = 2e-84
 Identities = 151/189 (79%), Positives = 170/189 (89%)
 Frame = -2

Query: 569 MLRNGTESVGECXXXXXXXSQQDIEDDRMIAVLLTEEYANLDSGVGRRLSSLAPVPHVPR 390
           ++ NG +SVGEC       SQQD+EDDRMIAV+L+EE+A LD  VGRRL+SL PV HVPR
Sbjct: 36  VMTNGMQSVGECSSSTSLSSQQDLEDDRMIAVVLSEEFAKLDGAVGRRLASLEPVRHVPR 95

Query: 389 INSYIPNINDASLDHQRLLQRLNVYNLFEVKVSGDGNCQFRALSDQLYRSPEYHKHVRKE 210
           IN YIPN++DASLDHQRL QRLNVY L+EVKVSGDGNCQFRALSDQ+Y+SPEYHKHVRKE
Sbjct: 96  INFYIPNLSDASLDHQRLQQRLNVYRLYEVKVSGDGNCQFRALSDQMYKSPEYHKHVRKE 155

Query: 209 VVKQLKQCRSLYEGYVPMKYKQYYKKVAKSGEWGDHVTLQAAADKFAAKICLLTSFRDTC 30
           +VKQLK  RSLYEGYVPMKYK+YYKK+AKSGEWGDH+TLQAAAD+FAAKICLLTSFRDTC
Sbjct: 156 IVKQLKDYRSLYEGYVPMKYKRYYKKMAKSGEWGDHITLQAAADRFAAKICLLTSFRDTC 215

Query: 29  FVEIIPQYQ 3
           F+EIIPQYQ
Sbjct: 216 FIEIIPQYQ 224


>ref|XP_002278321.1| PREDICTED: OTU domain-containing protein DDB_G0284757 [Vitis
           vinifera]
          Length = 226

 Score =  317 bits (813), Expect = 3e-84
 Identities = 151/188 (80%), Positives = 169/188 (89%)
 Frame = -2

Query: 566 LRNGTESVGECXXXXXXXSQQDIEDDRMIAVLLTEEYANLDSGVGRRLSSLAPVPHVPRI 387
           + NG +SVGEC       SQQD+EDDRMIAV+L+EE+A LD  VGRRL+SL PV HVPRI
Sbjct: 1   MTNGMQSVGECSSSTSLSSQQDLEDDRMIAVVLSEEFAKLDGAVGRRLASLEPVRHVPRI 60

Query: 386 NSYIPNINDASLDHQRLLQRLNVYNLFEVKVSGDGNCQFRALSDQLYRSPEYHKHVRKEV 207
           N YIPN++DASLDHQRL QRLNVY L+EVKVSGDGNCQFRALSDQ+Y+SPEYHKHVRKE+
Sbjct: 61  NFYIPNLSDASLDHQRLQQRLNVYRLYEVKVSGDGNCQFRALSDQMYKSPEYHKHVRKEI 120

Query: 206 VKQLKQCRSLYEGYVPMKYKQYYKKVAKSGEWGDHVTLQAAADKFAAKICLLTSFRDTCF 27
           VKQLK  RSLYEGYVPMKYK+YYKK+AKSGEWGDH+TLQAAAD+FAAKICLLTSFRDTCF
Sbjct: 121 VKQLKDYRSLYEGYVPMKYKRYYKKMAKSGEWGDHITLQAAADRFAAKICLLTSFRDTCF 180

Query: 26  VEIIPQYQ 3
           +EIIPQYQ
Sbjct: 181 IEIIPQYQ 188


>ref|XP_002320400.1| predicted protein [Populus trichocarpa] gi|222861173|gb|EEE98715.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  303 bits (777), Expect = 4e-80
 Identities = 147/181 (81%), Positives = 165/181 (91%)
 Frame = -2

Query: 545 VGECXXXXXXXSQQDIEDDRMIAVLLTEEYANLDSGVGRRLSSLAPVPHVPRINSYIPNI 366
           VGE        SQ D EDDRMIA++LTEEYANLD GV +RLS+LAPVPHVPRINSYIPN+
Sbjct: 1   VGESSSSTSLSSQHDNEDDRMIALVLTEEYANLDGGVAKRLSNLAPVPHVPRINSYIPNL 60

Query: 365 NDASLDHQRLLQRLNVYNLFEVKVSGDGNCQFRALSDQLYRSPEYHKHVRKEVVKQLKQC 186
           +DASLDHQRLLQRLNVY L EVKVSGDGNCQFRALS+Q+++SPE+HKHVRK+VVKQLK+ 
Sbjct: 61  SDASLDHQRLLQRLNVYGLCEVKVSGDGNCQFRALSEQMFKSPEHHKHVRKDVVKQLKEH 120

Query: 185 RSLYEGYVPMKYKQYYKKVAKSGEWGDHVTLQAAADKFAAKICLLTSFRDTCFVEIIPQY 6
           RSLYEG+VPMKYK+Y KK+AKSGEWGDHVTLQAAADKFAAKICLLTSFRDTCF+EI+PQY
Sbjct: 121 RSLYEGHVPMKYKRYCKKMAKSGEWGDHVTLQAAADKFAAKICLLTSFRDTCFIEIMPQY 180

Query: 5   Q 3
           Q
Sbjct: 181 Q 181


>ref|NP_186856.1| cysteine proteinase-like protein [Arabidopsis thaliana]
           gi|6513925|gb|AAF14829.1|AC011664_11 unknown protein
           [Arabidopsis thaliana] gi|45773792|gb|AAS76700.1|
           At3g02070 [Arabidopsis thaliana]
           gi|46402444|gb|AAS92324.1| At3g02070 [Arabidopsis
           thaliana] gi|222424391|dbj|BAH20151.1| AT3G02070
           [Arabidopsis thaliana] gi|332640238|gb|AEE73759.1|
           cysteine proteinase-like protein [Arabidopsis thaliana]
           gi|407078859|gb|AFS88961.1| OTU-containing
           deubiquitinating enzyme OTU12 [Arabidopsis thaliana]
          Length = 219

 Score =  301 bits (770), Expect = 3e-79
 Identities = 140/169 (82%), Positives = 157/169 (92%)
 Frame = -2

Query: 509 QQDIEDDRMIAVLLTEEYANLDSGVGRRLSSLAPVPHVPRINSYIPNINDASLDHQRLLQ 330
           ++D EDDRMIA +L+EEY+ LD  VGRRLS+LAPVPHVPRIN YIPN+NDA+LDHQRLLQ
Sbjct: 13  KKDTEDDRMIAFMLSEEYSKLDGAVGRRLSNLAPVPHVPRINCYIPNLNDATLDHQRLLQ 72

Query: 329 RLNVYNLFEVKVSGDGNCQFRALSDQLYRSPEYHKHVRKEVVKQLKQCRSLYEGYVPMKY 150
           RLNVY L E+KVSGDGNCQFRALSDQLYRSPEYHK VR+EVVKQLK+CRS+YE YVPMKY
Sbjct: 73  RLNVYGLCELKVSGDGNCQFRALSDQLYRSPEYHKQVRREVVKQLKECRSMYESYVPMKY 132

Query: 149 KQYYKKVAKSGEWGDHVTLQAAADKFAAKICLLTSFRDTCFVEIIPQYQ 3
           K+YYKK+ K GEWGDH+TLQAAAD+FAAKICLLTSFRDTCF+EIIPQYQ
Sbjct: 133 KRYYKKMGKFGEWGDHITLQAAADRFAAKICLLTSFRDTCFIEIIPQYQ 181


>ref|XP_004145623.1| PREDICTED: OTU domain-containing protein DDB_G0284757-like [Cucumis
           sativus]
          Length = 226

 Score =  298 bits (764), Expect = 1e-78
 Identities = 144/184 (78%), Positives = 160/184 (86%)
 Frame = -2

Query: 554 TESVGECXXXXXXXSQQDIEDDRMIAVLLTEEYANLDSGVGRRLSSLAPVPHVPRINSYI 375
           T+S+GEC       S QD+EDDRMIAV L+EEYA LD  V RRLS+LAP+ H PRIN YI
Sbjct: 5   TQSIGECSSSTSLSSHQDVEDDRMIAVALSEEYAKLDGAVARRLSNLAPIAHTPRINLYI 64

Query: 374 PNINDASLDHQRLLQRLNVYNLFEVKVSGDGNCQFRALSDQLYRSPEYHKHVRKEVVKQL 195
           PN +DASL++ RLLQRL+VY L EVKVSGDGNCQFRALSDQ+YRSPEYHKHVRK+VVKQL
Sbjct: 65  PNQSDASLEYHRLLQRLSVYGLHEVKVSGDGNCQFRALSDQMYRSPEYHKHVRKDVVKQL 124

Query: 194 KQCRSLYEGYVPMKYKQYYKKVAKSGEWGDHVTLQAAADKFAAKICLLTSFRDTCFVEII 15
           K  RSLYEGYVPMKY +YYKK+AKSGEWGDHVTLQAAADKFAAKICLLTSFRDTCF+EI+
Sbjct: 125 KDHRSLYEGYVPMKYSRYYKKMAKSGEWGDHVTLQAAADKFAAKICLLTSFRDTCFIEIV 184

Query: 14  PQYQ 3
           PQ Q
Sbjct: 185 PQSQ 188