BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003174
         (1853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466604.1| hypothetical protein SORBIDRAFT_01g010860 [S...   789   0.0  
ref|NP_001151538.1| eukaryotic peptide chain release factor subu...   786   0.0  
ref|NP_001051012.1| Os03g0702800 [Oryza sativa Japonica Group] g...   786   0.0  
ref|XP_003560681.1| PREDICTED: eukaryotic peptide chain release ...   783   0.0  
dbj|BAJ85616.1| predicted protein [Hordeum vulgare subsp. vulgare]    783   0.0  

>ref|XP_002466604.1| hypothetical protein SORBIDRAFT_01g010860 [Sorghum bicolor]
            gi|241920458|gb|EER93602.1| hypothetical protein
            SORBIDRAFT_01g010860 [Sorghum bicolor]
          Length = 437

 Score =  789 bits (2037), Expect = 0.0
 Identities = 396/432 (91%), Positives = 408/432 (94%)
 Frame = +2

Query: 158  MSDNQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN 337
            MSD QETDKN                RGNGTSMISLIMPPRDQ+SRVTKMLGDEYGTASN
Sbjct: 1    MSDGQETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN 60

Query: 338  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 517
            IKSRVNRQSVL AITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 518  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG 697
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTRE+LHKFTVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 698  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 877
            RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 240

Query: 878  DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG 1057
            DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEIL+NVKFIQEK+LIGKYFEEISQDTG
Sbjct: 241  DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG 300

Query: 1058 KYVFGVEDTLKALEMGAVEILIVWENLDINRYVLKNSATSEIIIKHLNKDQEADQSNFRD 1237
            KYVFGV+DTLKALEMGAVE LIVWENLD+NRYVLKNSAT E +IKHLNK+QEADQS+FRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLKNSATGETVIKHLNKEQEADQSHFRD 360

Query: 1238 AETNAELEVQEKLSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 1417
              TNAELEVQEK SLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGG+LRYQLDI
Sbjct: 361  PSTNAELEVQEKTSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDI 420

Query: 1418 RSFDEVSDDEGV 1453
            RSFDE+SDDEGV
Sbjct: 421  RSFDELSDDEGV 432


>ref|NP_001151538.1| eukaryotic peptide chain release factor subunit 1-1 [Zea mays]
            gi|195647508|gb|ACG43222.1| eukaryotic peptide chain
            release factor subunit 1-1 [Zea mays]
            gi|224035083|gb|ACN36617.1| unknown [Zea mays]
            gi|413933342|gb|AFW67893.1| eukaryotic peptide chain
            release factor subunit 1-1 isoform 1 [Zea mays]
            gi|413933343|gb|AFW67894.1| eukaryotic peptide chain
            release factor subunit 1-1 isoform 2 [Zea mays]
          Length = 437

 Score =  786 bits (2031), Expect = 0.0
 Identities = 394/432 (91%), Positives = 408/432 (94%)
 Frame = +2

Query: 158  MSDNQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN 337
            MSD QETDKN                RGNGTSMISLIMPPRDQ+SRVTKMLGDEYGTASN
Sbjct: 1    MSDGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN 60

Query: 338  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 517
            IKSRVNRQSVL AITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPF+PIN
Sbjct: 61   IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN 120

Query: 518  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG 697
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTRE+LHKFTVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 698  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 877
            RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 240

Query: 878  DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG 1057
            DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEIL+NVKFIQEK+LIGKYFEEISQDTG
Sbjct: 241  DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG 300

Query: 1058 KYVFGVEDTLKALEMGAVEILIVWENLDINRYVLKNSATSEIIIKHLNKDQEADQSNFRD 1237
            KYVFGV+DTLKALEMGAVE LIVWENLD+NRYVLKN+AT E +IKHLNK+QEADQS+FRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLKNTATGETVIKHLNKEQEADQSHFRD 360

Query: 1238 AETNAELEVQEKLSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 1417
              TNAELEVQEK SLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGG+LRYQLDI
Sbjct: 361  PSTNAELEVQEKTSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDI 420

Query: 1418 RSFDEVSDDEGV 1453
            RSFDE+SDDEGV
Sbjct: 421  RSFDELSDDEGV 432


>ref|NP_001051012.1| Os03g0702800 [Oryza sativa Japonica Group] gi|41469461|gb|AAS07262.1|
            eukaryotic peptide chain release factor subunit 1-3
            (eRF1-3) [Oryza sativa Japonica Group]
            gi|62733400|gb|AAX95517.1| Putative peptide chain release
            factor subunit 1 protein [Oryza sativa Japonica Group]
            gi|108710626|gb|ABF98421.1| Eukaryotic peptide chain
            release factor subunit 1-2, putative, expressed [Oryza
            sativa Japonica Group] gi|113549483|dbj|BAF12926.1|
            Os03g0702800 [Oryza sativa Japonica Group]
            gi|125545411|gb|EAY91550.1| hypothetical protein
            OsI_13184 [Oryza sativa Indica Group]
            gi|125587621|gb|EAZ28285.1| hypothetical protein
            OsJ_12260 [Oryza sativa Japonica Group]
            gi|215768469|dbj|BAH00698.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 437

 Score =  786 bits (2031), Expect = 0.0
 Identities = 396/432 (91%), Positives = 406/432 (93%)
 Frame = +2

Query: 158  MSDNQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN 337
            MSD QETDKN                RGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN
Sbjct: 1    MSDGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN 60

Query: 338  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 517
            IKSRVNRQSVL AITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPF+PIN
Sbjct: 61   IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN 120

Query: 518  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG 697
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG 180

Query: 698  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 877
            RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNV+GLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 878  DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG 1057
            DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEIL+NVKFIQEK+LIGKYFEEISQDTG
Sbjct: 241  DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG 300

Query: 1058 KYVFGVEDTLKALEMGAVEILIVWENLDINRYVLKNSATSEIIIKHLNKDQEADQSNFRD 1237
            KYVFGV+DTLK LEMGAVE LIVWENLD+NRYVLKNSAT E  IKHLNK+QEADQSNFRD
Sbjct: 301  KYVFGVDDTLKTLEMGAVETLIVWENLDVNRYVLKNSATGETAIKHLNKEQEADQSNFRD 360

Query: 1238 AETNAELEVQEKLSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 1417
              TNAELEVQ+K SLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
Sbjct: 361  TSTNAELEVQDKTSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 420

Query: 1418 RSFDEVSDDEGV 1453
            RSFDE+SDDEGV
Sbjct: 421  RSFDELSDDEGV 432


>ref|XP_003560681.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Brachypodium distachyon]
            gi|357117871|ref|XP_003560685.1| PREDICTED: eukaryotic
            peptide chain release factor subunit 1-3-like
            [Brachypodium distachyon]
          Length = 437

 Score =  783 bits (2022), Expect = 0.0
 Identities = 392/432 (90%), Positives = 407/432 (94%)
 Frame = +2

Query: 158  MSDNQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN 337
            MSD+ ETDKN                RGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN
Sbjct: 1    MSDSHETDKNIEMWKIKKLIKGLESARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN 60

Query: 338  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 517
            IKSRVNRQSVL AITSAQQRLKLYN+VPPNGLVLYTGTIVTDDGKEKKVTIDFEPF+PIN
Sbjct: 61   IKSRVNRQSVLAAITSAQQRLKLYNRVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN 120

Query: 518  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG 697
            ASLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTRE+LHKF+VDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 698  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 877
            RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 240

Query: 878  DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG 1057
            DMFDQRLQ KILNVVDVSYGGENGFNQAIELSAEIL+NVKFIQEK+LIGKYFEEISQDTG
Sbjct: 241  DMFDQRLQTKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG 300

Query: 1058 KYVFGVEDTLKALEMGAVEILIVWENLDINRYVLKNSATSEIIIKHLNKDQEADQSNFRD 1237
            KYVFGV+DTLKALEMGAVE L+VWENLD+NRYVLK+S T+EIIIKHLNKDQEADQSNFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLMVWENLDVNRYVLKHSVTAEIIIKHLNKDQEADQSNFRD 360

Query: 1238 AETNAELEVQEKLSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 1417
              TNAELEVQEK SLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
Sbjct: 361  ETTNAELEVQEKTSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 420

Query: 1418 RSFDEVSDDEGV 1453
            RSFD++ DDEGV
Sbjct: 421  RSFDDLDDDEGV 432


>dbj|BAJ85616.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 437

 Score =  783 bits (2021), Expect = 0.0
 Identities = 390/432 (90%), Positives = 409/432 (94%)
 Frame = +2

Query: 158  MSDNQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN 337
            MS++QETD+N                RGNGTSMISLIMPPRDQVSRV KMLGDEYGTASN
Sbjct: 1    MSESQETDRNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQVSRVAKMLGDEYGTASN 60

Query: 338  IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 517
            IKSRVNRQSVLGAITSAQQRLKLYN+VPPNGLVLYTGTIVTDDGKEKKVTIDFEPF+PIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN 120

Query: 518  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG 697
             SLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTRE+LHKFTVDLPKKHG
Sbjct: 121  VSLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 698  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 877
            RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNV+GLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 878  DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG 1057
            DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEIL+NVKFIQEK+LIGKYFEEISQDTG
Sbjct: 241  DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG 300

Query: 1058 KYVFGVEDTLKALEMGAVEILIVWENLDINRYVLKNSATSEIIIKHLNKDQEADQSNFRD 1237
            KYVFGV+DTLKALEMGAVE LIVWENLDINRY LK+S + E+I+KHLNK+QEADQSNFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDINRYSLKHSVSGEVIVKHLNKEQEADQSNFRD 360

Query: 1238 AETNAELEVQEKLSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 1417
            +ETNAELEVQEK+SLLEWFANEYKKFGC LEFVTNKSQEGSQFCRGFGGIGG+LRYQLDI
Sbjct: 361  SETNAELEVQEKISLLEWFANEYKKFGCALEFVTNKSQEGSQFCRGFGGIGGLLRYQLDI 420

Query: 1418 RSFDEVSDDEGV 1453
            RSFDEVSDDEG+
Sbjct: 421  RSFDEVSDDEGL 432