BLASTX nr result
ID: Bupleurum21_contig00003172
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00003172 (1663 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258... 440 e-121 ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|2... 395 e-107 ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc... 394 e-107 ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch... 394 e-107 ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2... 390 e-106 >ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera] Length = 346 Score = 440 bits (1131), Expect = e-121 Identities = 219/356 (61%), Positives = 260/356 (73%), Gaps = 5/356 (1%) Frame = +1 Query: 205 MAYQT--GPXXXXXXXXXFHYLNSPFGDTTLTKVFVGGLAWETRSETLRRYFEQFGEIFE 378 MAYQ GP F +LNSPFGDTT TKVFVGGLAWET+SET+RRYFEQFGEI E Sbjct: 1 MAYQPIPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60 Query: 379 AVVINDKNTGRSKGYGFVTFRDPESAKRACIDPSPIIDGRQANCNLASLGRPRPALPNVA 558 AVVI DKNTGRSKGYGFVTFRDPESA+RAC+DP+PIIDGR+ANCNLASLGRPRP++ Sbjct: 61 AVVITDKNTGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMS--Y 118 Query: 559 GHNRPPSPYYGGMPASRGAYISNFGYQQPYSFGLQQGFTYPQYGYPTYGSEYVYPQGVYN 738 G RP +PY G +PA+RG+Y+ NFGYQQP S+ QQGF YP YGY YG EYVYPQGVYN Sbjct: 119 GRLRPVTPYLGSVPATRGSYVGNFGYQQPVSYSYQQGFMYPSYGYAAYGPEYVYPQGVYN 178 Query: 739 PYAGQQYLQIYGVPGTVNTAMYPY-NVGQNVPSGHGYTTLQGYPLPGHQIVQLGGPTANP 915 PY GQQYLQIYGVPGTVNTA+YPY +GQ +PS HGYTT+QGY +PGHQ +Q GG + N Sbjct: 179 PYPGQQYLQIYGVPGTVNTAIYPYGQLGQTLPSSHGYTTVQGYAMPGHQFMQFGGSSVNA 238 Query: 916 ITTTSLQTFQAPYPAGVVSPVPARPQLIIPVHSPQFIQSGSAEQNAV*GDSKVHSHCSRT 1095 I+T+ + T QAPYP G+ +PVPA+PQ I+P HSPQFIQ +Q G K + R Sbjct: 239 ISTSPIPTIQAPYPTGIAAPVPAQPQFIVPAHSPQFIQGSGPDQTT--GYEKDETVVLRD 296 Query: 1096 KSSSNAT*VADFRSFLANNPFCILEVLMFRVHHKNRV--LLLMVEEG*WKLQTALP 1257 S F S ++ F I++V+ H ++R+ LLM E+ WKL+ ALP Sbjct: 297 GDS--------FASSQPSSGFEIIKVIHSHAHQRSRMSESLLMAEKEPWKLRVALP 344 >ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|222842347|gb|EEE79894.1| predicted protein [Populus trichocarpa] Length = 287 Score = 395 bits (1014), Expect = e-107 Identities = 190/285 (66%), Positives = 216/285 (75%), Gaps = 4/285 (1%) Frame = +1 Query: 205 MAYQT--GPXXXXXXXXXFHYLNSPFGDTTLTKVFVGGLAWETRSETLRRYFEQFGEIFE 378 MAYQ GP F Y+NSPFGDTT TKVFVGGLAWET+SET+RRYFEQFG+I E Sbjct: 1 MAYQAVPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILE 60 Query: 379 AVVINDKNTGRSKGYGFVTFRDPESAKRACIDPSPIIDGRQANCNLASLGRPRPALPNVA 558 AVVI DKNTGRSKGYGFVTFR+PE+A+RAC DP+P+IDGR+ANCNLASLGRPRP P V Sbjct: 61 AVVITDKNTGRSKGYGFVTFREPEAARRACADPTPMIDGRRANCNLASLGRPRPPQPYV- 119 Query: 559 GHNRPPSPYYGGMPASRGAYISNFGYQQPYSFGLQQGFTYPQYGYPTYGSEYVYPQGVYN 738 G RP PY + RG Y +FGYQQP S+G QQG Y YGY YG EYVY QGVYN Sbjct: 120 GRLRPAPPYIASVQTPRGTYAGSFGYQQPVSYGYQQGLMYHPYGYAAYGPEYVYQQGVYN 179 Query: 739 PY-AGQQYLQIYGVPGTVNTAMYPY-NVGQNVPSGHGYTTLQGYPLPGHQIVQLGGPTAN 912 PY AGQQYLQIYGVPGTVNT MYPY GQNVP GHGYTT+QGY +PGH I+Q GGP N Sbjct: 180 PYAAGQQYLQIYGVPGTVNTGMYPYGQFGQNVPGGHGYTTMQGYAVPGHHIMQFGGPGVN 239 Query: 913 PITTTSLQTFQAPYPAGVVSPVPARPQLIIPVHSPQFIQSGSAEQ 1047 +TT+ L T QAPYP G+ + VPA+ Q I+P SPQ++ S ++Q Sbjct: 240 AMTTSPLPTIQAPYPTGIAAAVPAQQQFIVPAPSPQYMHSSGSDQ 284 >ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max] Length = 286 Score = 394 bits (1012), Expect = e-107 Identities = 188/287 (65%), Positives = 216/287 (75%), Gaps = 4/287 (1%) Frame = +1 Query: 205 MAYQT--GPXXXXXXXXXFHYLNSPFGDTTLTKVFVGGLAWETRSETLRRYFEQFGEIFE 378 MAYQ GP F LNSPFGDTT TKVFVGGLAWET+SET+RRYF+QFGEI E Sbjct: 1 MAYQAMQGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILE 60 Query: 379 AVVINDKNTGRSKGYGFVTFRDPESAKRACIDPSPIIDGRQANCNLASLGRPRPALPNVA 558 AVVI DKNTGRSKGYGFVTFRDPE+A+RAC DPSP+IDGR+ANCNLASLGRPRP LP Sbjct: 61 AVVITDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPLP--Y 118 Query: 559 GHNRPPSPYYGGMPASRGAYISNFGYQQPYSFGLQQGFTYPQYGYPTYGSEYVYPQGVYN 738 G RP SPY G + +RGAY+ FGYQQP S+ QQG YP YGY +YG EY+YPQ +YN Sbjct: 119 GRIRPASPYVGSLQPARGAYVGGFGYQQPVSYSYQQGLVYPPYGYTSYGPEYIYPQSLYN 178 Query: 739 PYAGQQYLQIYGVPGTVN-TAMYPY-NVGQNVPSGHGYTTLQGYPLPGHQIVQLGGPTAN 912 PY GQQYLQIYGVPG VN T +YPY VGQ + SGHGY+ +QGY +PGHQIV GG N Sbjct: 179 PYMGQQYLQIYGVPGAVNTTTIYPYGQVGQAITSGHGYSAMQGYTVPGHQIVPYGGSNVN 238 Query: 913 PITTTSLQTFQAPYPAGVVSPVPARPQLIIPVHSPQFIQSGSAEQNA 1053 ITT+ + QA YP+G+ +PVP +PQ I+P SPQF+Q +Q A Sbjct: 239 AITTSPMPAIQASYPSGIAAPVPGQPQFIVPAPSPQFMQGSGPDQTA 285 >ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine max] Length = 293 Score = 394 bits (1011), Expect = e-107 Identities = 188/292 (64%), Positives = 217/292 (74%), Gaps = 9/292 (3%) Frame = +1 Query: 205 MAYQT--GPXXXXXXXXXFHYLNSPFGDTTLTKVFVGGLAWETRSETLRRYFEQFGEIFE 378 MAYQ P F LNSPFGDTT TKVFVGGLAWET+SET+RRYF+QFGEI E Sbjct: 1 MAYQAIQVPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILE 60 Query: 379 AVVINDKNTGRSKGYGFVTFRDPESAKRACIDPSPIIDGRQANCNLASLGRPRPALPN-- 552 AVVI DKNTGRSKGYGFVTFRDPE+A+RAC DP+P+IDGR+ANCNLASLGRPRP LP Sbjct: 61 AVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPVIDGRRANCNLASLGRPRPPLPYGI 120 Query: 553 ---VAGHNRPPSPYYGGMPASRGAYISNFGY-QQPYSFGLQQGFTYPQYGYPTYGSEYVY 720 + RP SPY G + +RGAY+ FGY QQP S+ QQG YP YGY TYG EY+Y Sbjct: 121 VLCLIRRIRPASPYVGSLQPARGAYVGGFGYQQQPVSYSYQQGLVYPPYGYTTYGPEYIY 180 Query: 721 PQGVYNPYAGQQYLQIYGVPGTVNTAMYPY-NVGQNVPSGHGYTTLQGYPLPGHQIVQLG 897 PQ +YNPY GQQYLQIYGVPG VNT +YPY VGQ +PSGHGY+ +QGY +PGHQIV G Sbjct: 181 PQSLYNPYMGQQYLQIYGVPGAVNTTVYPYGQVGQAIPSGHGYSAIQGYTVPGHQIVPYG 240 Query: 898 GPTANPITTTSLQTFQAPYPAGVVSPVPARPQLIIPVHSPQFIQSGSAEQNA 1053 G N ITT+ + QA YP+G+ +PVP +PQ I+P HSPQF+Q +Q A Sbjct: 241 GSNVNAITTSPMPAIQASYPSGIAAPVPGQPQFIVPAHSPQFMQGSGPDQTA 292 >ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1| predicted protein [Populus trichocarpa] Length = 286 Score = 390 bits (1002), Expect = e-106 Identities = 186/285 (65%), Positives = 217/285 (76%), Gaps = 4/285 (1%) Frame = +1 Query: 205 MAYQT--GPXXXXXXXXXFHYLNSPFGDTTLTKVFVGGLAWETRSETLRRYFEQFGEIFE 378 MAYQ GP F Y+NSPFGDTT TKVFVGGLAWET+SET+RRYFEQFG+I E Sbjct: 1 MAYQAIPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILE 60 Query: 379 AVVINDKNTGRSKGYGFVTFRDPESAKRACIDPSPIIDGRQANCNLASLGRPRPALPNVA 558 AVVI DKNTGRSKGYGFVTFR+P++A+RAC DP+PIIDGR+ANCNLASLGRPRP LP Sbjct: 61 AVVITDKNTGRSKGYGFVTFREPDAARRACADPTPIIDGRRANCNLASLGRPRPPLP--Y 118 Query: 559 GHNRPPSPYYGGMPASRGAYISNFGYQQPYSFGLQQGFTYPQYGYPTYGSEYVYPQGVYN 738 G RP +PY + RG Y+ +FGYQQP S+G QQG Y YGY YG EYVY QG YN Sbjct: 119 GRPRPAAPYITSVQTPRGTYVGSFGYQQPVSYGYQQGLMYNPYGYAAYGPEYVYQQGAYN 178 Query: 739 PYA-GQQYLQIYGVPGTVNTAMYPY-NVGQNVPSGHGYTTLQGYPLPGHQIVQLGGPTAN 912 PYA G QYLQIYGVPGTVN+ MYPY + QNVP GHGYT++ GY +PGHQIVQ GGP+ N Sbjct: 179 PYATGHQYLQIYGVPGTVNSGMYPYGQLSQNVPGGHGYTSMPGYAVPGHQIVQFGGPSVN 238 Query: 913 PITTTSLQTFQAPYPAGVVSPVPARPQLIIPVHSPQFIQSGSAEQ 1047 ITT+S+ T QAPY G+ + VPA+ Q I+P SPQ++Q ++Q Sbjct: 239 AITTSSMPTIQAPYHTGIAAAVPAQSQFIVPAPSPQYMQGSGSDQ 283