BLASTX nr result

ID: Bupleurum21_contig00003172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003172
         (1663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   440   e-121
ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|2...   395   e-107
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   394   e-107
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...   394   e-107
ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2...   390   e-106

>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  440 bits (1131), Expect = e-121
 Identities = 219/356 (61%), Positives = 260/356 (73%), Gaps = 5/356 (1%)
 Frame = +1

Query: 205  MAYQT--GPXXXXXXXXXFHYLNSPFGDTTLTKVFVGGLAWETRSETLRRYFEQFGEIFE 378
            MAYQ   GP         F +LNSPFGDTT TKVFVGGLAWET+SET+RRYFEQFGEI E
Sbjct: 1    MAYQPIPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 379  AVVINDKNTGRSKGYGFVTFRDPESAKRACIDPSPIIDGRQANCNLASLGRPRPALPNVA 558
            AVVI DKNTGRSKGYGFVTFRDPESA+RAC+DP+PIIDGR+ANCNLASLGRPRP++    
Sbjct: 61   AVVITDKNTGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMS--Y 118

Query: 559  GHNRPPSPYYGGMPASRGAYISNFGYQQPYSFGLQQGFTYPQYGYPTYGSEYVYPQGVYN 738
            G  RP +PY G +PA+RG+Y+ NFGYQQP S+  QQGF YP YGY  YG EYVYPQGVYN
Sbjct: 119  GRLRPVTPYLGSVPATRGSYVGNFGYQQPVSYSYQQGFMYPSYGYAAYGPEYVYPQGVYN 178

Query: 739  PYAGQQYLQIYGVPGTVNTAMYPY-NVGQNVPSGHGYTTLQGYPLPGHQIVQLGGPTANP 915
            PY GQQYLQIYGVPGTVNTA+YPY  +GQ +PS HGYTT+QGY +PGHQ +Q GG + N 
Sbjct: 179  PYPGQQYLQIYGVPGTVNTAIYPYGQLGQTLPSSHGYTTVQGYAMPGHQFMQFGGSSVNA 238

Query: 916  ITTTSLQTFQAPYPAGVVSPVPARPQLIIPVHSPQFIQSGSAEQNAV*GDSKVHSHCSRT 1095
            I+T+ + T QAPYP G+ +PVPA+PQ I+P HSPQFIQ    +Q    G  K  +   R 
Sbjct: 239  ISTSPIPTIQAPYPTGIAAPVPAQPQFIVPAHSPQFIQGSGPDQTT--GYEKDETVVLRD 296

Query: 1096 KSSSNAT*VADFRSFLANNPFCILEVLMFRVHHKNRV--LLLMVEEG*WKLQTALP 1257
              S        F S   ++ F I++V+    H ++R+   LLM E+  WKL+ ALP
Sbjct: 297  GDS--------FASSQPSSGFEIIKVIHSHAHQRSRMSESLLMAEKEPWKLRVALP 344


>ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|222842347|gb|EEE79894.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  395 bits (1014), Expect = e-107
 Identities = 190/285 (66%), Positives = 216/285 (75%), Gaps = 4/285 (1%)
 Frame = +1

Query: 205  MAYQT--GPXXXXXXXXXFHYLNSPFGDTTLTKVFVGGLAWETRSETLRRYFEQFGEIFE 378
            MAYQ   GP         F Y+NSPFGDTT TKVFVGGLAWET+SET+RRYFEQFG+I E
Sbjct: 1    MAYQAVPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILE 60

Query: 379  AVVINDKNTGRSKGYGFVTFRDPESAKRACIDPSPIIDGRQANCNLASLGRPRPALPNVA 558
            AVVI DKNTGRSKGYGFVTFR+PE+A+RAC DP+P+IDGR+ANCNLASLGRPRP  P V 
Sbjct: 61   AVVITDKNTGRSKGYGFVTFREPEAARRACADPTPMIDGRRANCNLASLGRPRPPQPYV- 119

Query: 559  GHNRPPSPYYGGMPASRGAYISNFGYQQPYSFGLQQGFTYPQYGYPTYGSEYVYPQGVYN 738
            G  RP  PY   +   RG Y  +FGYQQP S+G QQG  Y  YGY  YG EYVY QGVYN
Sbjct: 120  GRLRPAPPYIASVQTPRGTYAGSFGYQQPVSYGYQQGLMYHPYGYAAYGPEYVYQQGVYN 179

Query: 739  PY-AGQQYLQIYGVPGTVNTAMYPY-NVGQNVPSGHGYTTLQGYPLPGHQIVQLGGPTAN 912
            PY AGQQYLQIYGVPGTVNT MYPY   GQNVP GHGYTT+QGY +PGH I+Q GGP  N
Sbjct: 180  PYAAGQQYLQIYGVPGTVNTGMYPYGQFGQNVPGGHGYTTMQGYAVPGHHIMQFGGPGVN 239

Query: 913  PITTTSLQTFQAPYPAGVVSPVPARPQLIIPVHSPQFIQSGSAEQ 1047
             +TT+ L T QAPYP G+ + VPA+ Q I+P  SPQ++ S  ++Q
Sbjct: 240  AMTTSPLPTIQAPYPTGIAAAVPAQQQFIVPAPSPQYMHSSGSDQ 284


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  394 bits (1012), Expect = e-107
 Identities = 188/287 (65%), Positives = 216/287 (75%), Gaps = 4/287 (1%)
 Frame = +1

Query: 205  MAYQT--GPXXXXXXXXXFHYLNSPFGDTTLTKVFVGGLAWETRSETLRRYFEQFGEIFE 378
            MAYQ   GP         F  LNSPFGDTT TKVFVGGLAWET+SET+RRYF+QFGEI E
Sbjct: 1    MAYQAMQGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILE 60

Query: 379  AVVINDKNTGRSKGYGFVTFRDPESAKRACIDPSPIIDGRQANCNLASLGRPRPALPNVA 558
            AVVI DKNTGRSKGYGFVTFRDPE+A+RAC DPSP+IDGR+ANCNLASLGRPRP LP   
Sbjct: 61   AVVITDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPLP--Y 118

Query: 559  GHNRPPSPYYGGMPASRGAYISNFGYQQPYSFGLQQGFTYPQYGYPTYGSEYVYPQGVYN 738
            G  RP SPY G +  +RGAY+  FGYQQP S+  QQG  YP YGY +YG EY+YPQ +YN
Sbjct: 119  GRIRPASPYVGSLQPARGAYVGGFGYQQPVSYSYQQGLVYPPYGYTSYGPEYIYPQSLYN 178

Query: 739  PYAGQQYLQIYGVPGTVN-TAMYPY-NVGQNVPSGHGYTTLQGYPLPGHQIVQLGGPTAN 912
            PY GQQYLQIYGVPG VN T +YPY  VGQ + SGHGY+ +QGY +PGHQIV  GG   N
Sbjct: 179  PYMGQQYLQIYGVPGAVNTTTIYPYGQVGQAITSGHGYSAMQGYTVPGHQIVPYGGSNVN 238

Query: 913  PITTTSLQTFQAPYPAGVVSPVPARPQLIIPVHSPQFIQSGSAEQNA 1053
             ITT+ +   QA YP+G+ +PVP +PQ I+P  SPQF+Q    +Q A
Sbjct: 239  AITTSPMPAIQASYPSGIAAPVPGQPQFIVPAPSPQFMQGSGPDQTA 285


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
            max]
          Length = 293

 Score =  394 bits (1011), Expect = e-107
 Identities = 188/292 (64%), Positives = 217/292 (74%), Gaps = 9/292 (3%)
 Frame = +1

Query: 205  MAYQT--GPXXXXXXXXXFHYLNSPFGDTTLTKVFVGGLAWETRSETLRRYFEQFGEIFE 378
            MAYQ    P         F  LNSPFGDTT TKVFVGGLAWET+SET+RRYF+QFGEI E
Sbjct: 1    MAYQAIQVPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILE 60

Query: 379  AVVINDKNTGRSKGYGFVTFRDPESAKRACIDPSPIIDGRQANCNLASLGRPRPALPN-- 552
            AVVI DKNTGRSKGYGFVTFRDPE+A+RAC DP+P+IDGR+ANCNLASLGRPRP LP   
Sbjct: 61   AVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPVIDGRRANCNLASLGRPRPPLPYGI 120

Query: 553  ---VAGHNRPPSPYYGGMPASRGAYISNFGY-QQPYSFGLQQGFTYPQYGYPTYGSEYVY 720
               +    RP SPY G +  +RGAY+  FGY QQP S+  QQG  YP YGY TYG EY+Y
Sbjct: 121  VLCLIRRIRPASPYVGSLQPARGAYVGGFGYQQQPVSYSYQQGLVYPPYGYTTYGPEYIY 180

Query: 721  PQGVYNPYAGQQYLQIYGVPGTVNTAMYPY-NVGQNVPSGHGYTTLQGYPLPGHQIVQLG 897
            PQ +YNPY GQQYLQIYGVPG VNT +YPY  VGQ +PSGHGY+ +QGY +PGHQIV  G
Sbjct: 181  PQSLYNPYMGQQYLQIYGVPGAVNTTVYPYGQVGQAIPSGHGYSAIQGYTVPGHQIVPYG 240

Query: 898  GPTANPITTTSLQTFQAPYPAGVVSPVPARPQLIIPVHSPQFIQSGSAEQNA 1053
            G   N ITT+ +   QA YP+G+ +PVP +PQ I+P HSPQF+Q    +Q A
Sbjct: 241  GSNVNAITTSPMPAIQASYPSGIAAPVPGQPQFIVPAHSPQFMQGSGPDQTA 292


>ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  390 bits (1002), Expect = e-106
 Identities = 186/285 (65%), Positives = 217/285 (76%), Gaps = 4/285 (1%)
 Frame = +1

Query: 205  MAYQT--GPXXXXXXXXXFHYLNSPFGDTTLTKVFVGGLAWETRSETLRRYFEQFGEIFE 378
            MAYQ   GP         F Y+NSPFGDTT TKVFVGGLAWET+SET+RRYFEQFG+I E
Sbjct: 1    MAYQAIPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILE 60

Query: 379  AVVINDKNTGRSKGYGFVTFRDPESAKRACIDPSPIIDGRQANCNLASLGRPRPALPNVA 558
            AVVI DKNTGRSKGYGFVTFR+P++A+RAC DP+PIIDGR+ANCNLASLGRPRP LP   
Sbjct: 61   AVVITDKNTGRSKGYGFVTFREPDAARRACADPTPIIDGRRANCNLASLGRPRPPLP--Y 118

Query: 559  GHNRPPSPYYGGMPASRGAYISNFGYQQPYSFGLQQGFTYPQYGYPTYGSEYVYPQGVYN 738
            G  RP +PY   +   RG Y+ +FGYQQP S+G QQG  Y  YGY  YG EYVY QG YN
Sbjct: 119  GRPRPAAPYITSVQTPRGTYVGSFGYQQPVSYGYQQGLMYNPYGYAAYGPEYVYQQGAYN 178

Query: 739  PYA-GQQYLQIYGVPGTVNTAMYPY-NVGQNVPSGHGYTTLQGYPLPGHQIVQLGGPTAN 912
            PYA G QYLQIYGVPGTVN+ MYPY  + QNVP GHGYT++ GY +PGHQIVQ GGP+ N
Sbjct: 179  PYATGHQYLQIYGVPGTVNSGMYPYGQLSQNVPGGHGYTSMPGYAVPGHQIVQFGGPSVN 238

Query: 913  PITTTSLQTFQAPYPAGVVSPVPARPQLIIPVHSPQFIQSGSAEQ 1047
             ITT+S+ T QAPY  G+ + VPA+ Q I+P  SPQ++Q   ++Q
Sbjct: 239  AITTSSMPTIQAPYHTGIAAAVPAQSQFIVPAPSPQYMQGSGSDQ 283


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