BLASTX nr result

ID: Bupleurum21_contig00003167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003167
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|1OOW|A Chain A, The Crystal Structure Of The Spinach Plastoc...   111   7e-23
pdb|2PCF|A Chain A, The Complex Of Cytochrome F And Plastocyanin...   111   7e-23
sp|P00289.2|PLAS_SPIOL RecName: Full=Plastocyanin, chloroplastic...   111   7e-23
pdb|1AG6|A Chain A, Plastocyanin From Spinach                         111   7e-23
pdb|1TEF|A Chain A, Crystal Structure Of The Spinach Plastocyani...   108   3e-22

>pdb|1OOW|A Chain A, The Crystal Structure Of The Spinach Plastocyanin Double
           Mutant G8dL12E GIVES INSIGHT INTO ITS LOW REACTIVITY
           Towards Photosystem 1 And Cytochrome F
          Length = 99

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/56 (92%), Positives = 54/56 (96%)
 Frame = -3

Query: 261 DEIPSGVDAAKISMSDEDLLNAPGETYSVTLTEKGTYKFYCSPHQGAGMAGQVTVN 94
           DEIPSGVDAAKISMS+EDLLNAPGETY VTLTEKGTYKFYCSPHQGAGM G+VTVN
Sbjct: 44  DEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 99


>pdb|2PCF|A Chain A, The Complex Of Cytochrome F And Plastocyanin Determined
           With Paramagnetic Nmr. Based On The Structures Of
           Cytochrome F And Plastocyanin, 10 Structures
           gi|62738655|pdb|1YLB|B Chain B, Nmr Solution Structure
           Of The Reduced Spinach Plastocyanin
          Length = 99

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/56 (92%), Positives = 54/56 (96%)
 Frame = -3

Query: 261 DEIPSGVDAAKISMSDEDLLNAPGETYSVTLTEKGTYKFYCSPHQGAGMAGQVTVN 94
           DEIPSGVDAAKISMS+EDLLNAPGETY VTLTEKGTYKFYCSPHQGAGM G+VTVN
Sbjct: 44  DEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 99


>sp|P00289.2|PLAS_SPIOL RecName: Full=Plastocyanin, chloroplastic; Flags: Precursor
           gi|21267|emb|CAA28398.1| unnamed protein product
           [Spinacia oleracea]
          Length = 168

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/56 (92%), Positives = 54/56 (96%)
 Frame = -3

Query: 261 DEIPSGVDAAKISMSDEDLLNAPGETYSVTLTEKGTYKFYCSPHQGAGMAGQVTVN 94
           DEIPSGVDAAKISMS+EDLLNAPGETY VTLTEKGTYKFYCSPHQGAGM G+VTVN
Sbjct: 113 DEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168


>pdb|1AG6|A Chain A, Plastocyanin From Spinach
          Length = 99

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/56 (92%), Positives = 54/56 (96%)
 Frame = -3

Query: 261 DEIPSGVDAAKISMSDEDLLNAPGETYSVTLTEKGTYKFYCSPHQGAGMAGQVTVN 94
           DEIPSGVDAAKISMS+EDLLNAPGETY VTLTEKGTYKFYCSPHQGAGM G+VTVN
Sbjct: 44  DEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 99


>pdb|1TEF|A Chain A, Crystal Structure Of The Spinach Plastocyanin Mutants
           G8dK30CT69C AND K30CT69C- A Study Of The Effect On
           Crystal Packing And Thermostability From The
           Introduction Of A Novel Disulfide Bond
           gi|82407306|pdb|1TEF|B Chain B, Crystal Structure Of The
           Spinach Plastocyanin Mutants G8dK30CT69C AND K30CT69C- A
           Study Of The Effect On Crystal Packing And
           Thermostability From The Introduction Of A Novel
           Disulfide Bond
          Length = 99

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/56 (91%), Positives = 53/56 (94%)
 Frame = -3

Query: 261 DEIPSGVDAAKISMSDEDLLNAPGETYSVTLTEKGTYKFYCSPHQGAGMAGQVTVN 94
           DEIPSGVDAAKISMS+EDLLNAPGE Y VTLTEKGTYKFYCSPHQGAGM G+VTVN
Sbjct: 44  DEIPSGVDAAKISMSEEDLLNAPGECYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 99


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