BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003166
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]   464   e-128
ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform ...   458   e-126
ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula] gi...   454   e-125
gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK...   452   e-125
ref|XP_003519157.1| PREDICTED: F-box protein SKIP1-like isoform ...   436   e-120

>ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]
          Length = 308

 Score =  464 bits (1193), Expect = e-128
 Identities = 213/308 (69%), Positives = 251/308 (81%)
 Frame = +1

Query: 79   MDNKANPGGGGTGSEWSELTHECLVNVFSRLTFDERWRGAMLVCKSWLRANAEPCLNSVF 258
            MDN+         S+WSELTHECL NV SRLT  +RW G MLVCKSWL A  +P L S  
Sbjct: 1    MDNQGGQADSELNSDWSELTHECLTNVLSRLTLHDRWTGPMLVCKSWLHACKDPSLFSTL 60

Query: 259  DLQSHFDSATESPRWWQPRFEYRIDNMLRSVVVWADGALSEIRVSHCSDRSLTLVAQRCP 438
            DL+ HFDS TES RWW P FE +ID MLRS+  W+ G+++EIRV HCSDRSL+  A RC 
Sbjct: 61   DLEVHFDSPTESARWWTPEFERKIDAMLRSIAEWSGGSITEIRVRHCSDRSLSFAADRCS 120

Query: 439  NLQVLSIRSCPNVTDETMAKIALACPMLRELDISYCYEVSYKTLELIGKNCPNLRILKRN 618
            NL+VLSI+SCPNVTD +MA++A  C  LRE+DISYCYE+S+++L L+G+NCPNL+ILKRN
Sbjct: 121  NLEVLSIKSCPNVTDASMARVAFRCLKLREVDISYCYEISHESLILLGRNCPNLKILKRN 180

Query: 619  LMNWLDPSQHTGVVPNEYLNACPQDGDTEAAAIAKHMPHLLHLEIRFSKLSARGLVMISQ 798
            LMNWLDPSQH G+VPNEYLNACPQDGD+EAAAI K MPHL HLE+RFSK+SA+GL +I  
Sbjct: 181  LMNWLDPSQHIGIVPNEYLNACPQDGDSEAAAIGKTMPHLEHLELRFSKISAKGLALICD 240

Query: 799  GCSNLEFLDLSGCANVTSRDIANSSSQLKSLKDIKKPNFYIPRSVFQTDRYGHWSLYDDR 978
            GC NLE+LDLSGCAN+TSRDIAN++S LK+LK I+KPNFYIPRSVF  +RYGHW LYDDR
Sbjct: 241  GCLNLEYLDLSGCANLTSRDIANATSNLKNLKKIEKPNFYIPRSVFHAERYGHWRLYDDR 300

Query: 979  FQTDVFRI 1002
            FQTD FRI
Sbjct: 301  FQTDTFRI 308


>ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform 1 [Glycine max]
          Length = 306

 Score =  458 bits (1179), Expect = e-126
 Identities = 212/297 (71%), Positives = 251/297 (84%)
 Frame = +1

Query: 112  TGSEWSELTHECLVNVFSRLTFDERWRGAMLVCKSWLRANAEPCLNSVFDLQSHFDSATE 291
            T S+WSELT ECL+N+ SRL+ ++RWRG MLVCKSW     EP L+ VF+L   FDS TE
Sbjct: 10   TESDWSELTRECLINILSRLSVEDRWRGTMLVCKSWFSVFKEPSLHFVFNLDPQFDSPTE 69

Query: 292  SPRWWQPRFEYRIDNMLRSVVVWADGALSEIRVSHCSDRSLTLVAQRCPNLQVLSIRSCP 471
            S RWW P FE +IDNMLRSVV WA  +L+ IR+ HCSDRSL LVAQ CPNL+VL IRSCP
Sbjct: 70   STRWWTPEFEAKIDNMLRSVVEWAQSSLTHIRIRHCSDRSLALVAQSCPNLEVLFIRSCP 129

Query: 472  NVTDETMAKIALACPMLRELDISYCYEVSYKTLELIGKNCPNLRILKRNLMNWLDPSQHT 651
             VTD+++++IAL+CP LRELDISYCYE+++++L LIG+NCPNL++LKRNLMNWLDPSQH 
Sbjct: 130  RVTDDSISRIALSCPKLRELDISYCYEITHESLVLIGRNCPNLKVLKRNLMNWLDPSQHR 189

Query: 652  GVVPNEYLNACPQDGDTEAAAIAKHMPHLLHLEIRFSKLSARGLVMISQGCSNLEFLDLS 831
            G+VP++YLNACPQDGD EAAAIA  MP L  LEIRFSKL+A+GL  I QGC NLEFLDLS
Sbjct: 190  GIVPDDYLNACPQDGDDEAAAIANSMPGLEQLEIRFSKLTAKGLNSICQGCPNLEFLDLS 249

Query: 832  GCANVTSRDIANSSSQLKSLKDIKKPNFYIPRSVFQTDRYGHWSLYDDRFQTDVFRI 1002
            GCAN+TSRDIAN+SS L  LK+IKKPNFYIPRSVF T+RYGHWSLYD+RFQTD+F+I
Sbjct: 250  GCANLTSRDIANASSSLVHLKEIKKPNFYIPRSVFHTERYGHWSLYDERFQTDIFQI 306


>ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula] gi|355511349|gb|AES92491.1|
            F-box protein SKIP1 [Medicago truncatula]
          Length = 302

 Score =  454 bits (1167), Expect = e-125
 Identities = 210/296 (70%), Positives = 252/296 (85%), Gaps = 1/296 (0%)
 Frame = +1

Query: 118  SEWSELTHECLVNVFSRLTFDERWRGAMLVCKSWLRA-NAEPCLNSVFDLQSHFDSATES 294
            +EW ELT ECL+N+ SRL+F+++WRG++LVCKSW  A   EP L+SVF+L  +FD   ES
Sbjct: 7    AEWGELTRECLINILSRLSFEDQWRGSLLVCKSWFNAFKEEPSLHSVFNLDPYFDKPLES 66

Query: 295  PRWWQPRFEYRIDNMLRSVVVWADGALSEIRVSHCSDRSLTLVAQRCPNLQVLSIRSCPN 474
            PRWW  +FE +ID+MLRS+V W    L++IR+ HCSDRSL LVAQRCPNL+VLSIRSCP 
Sbjct: 67   PRWWTLQFESQIDSMLRSIVQWTHIFLTQIRIRHCSDRSLALVAQRCPNLEVLSIRSCPR 126

Query: 475  VTDETMAKIALACPMLRELDISYCYEVSYKTLELIGKNCPNLRILKRNLMNWLDPSQHTG 654
            VTD++M+KIA  CP LRELDISYCYE+++++L LIG+NC N+++LKRNLMNWLDPSQH G
Sbjct: 127  VTDDSMSKIATGCPNLRELDISYCYEITHESLVLIGRNCSNIKVLKRNLMNWLDPSQHVG 186

Query: 655  VVPNEYLNACPQDGDTEAAAIAKHMPHLLHLEIRFSKLSARGLVMISQGCSNLEFLDLSG 834
            +VP++YLNACPQDGD+EAAAIA  MPHL  LEIRFSKL+A+GL  I QGC NLEFLDLSG
Sbjct: 187  IVPDDYLNACPQDGDSEAAAIANSMPHLEGLEIRFSKLTAKGLNSICQGCPNLEFLDLSG 246

Query: 835  CANVTSRDIANSSSQLKSLKDIKKPNFYIPRSVFQTDRYGHWSLYDDRFQTDVFRI 1002
            CAN+TSRDIA +SS L  LKDIKKPNFYIPRSVF T+RYGHWSLYD+RFQTDVFRI
Sbjct: 247  CANLTSRDIAKASSSLSHLKDIKKPNFYIPRSVFHTERYGHWSLYDERFQTDVFRI 302


>gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK45992.1| unknown
            [Medicago truncatula]
          Length = 302

 Score =  452 bits (1163), Expect = e-125
 Identities = 209/296 (70%), Positives = 251/296 (84%), Gaps = 1/296 (0%)
 Frame = +1

Query: 118  SEWSELTHECLVNVFSRLTFDERWRGAMLVCKSWLRA-NAEPCLNSVFDLQSHFDSATES 294
            +EW ELT ECL+N+ SRL+F+++WRG++LVCKSW  A   EP L+SVF+L  +FD   ES
Sbjct: 7    AEWGELTRECLINILSRLSFEDQWRGSLLVCKSWFNAFKEEPSLHSVFNLDPYFDKPLES 66

Query: 295  PRWWQPRFEYRIDNMLRSVVVWADGALSEIRVSHCSDRSLTLVAQRCPNLQVLSIRSCPN 474
            PRWW  +FE +ID+MLRS+V W    L++IR+ HCSDRSL LVAQRCPNL+VLSIRSCP 
Sbjct: 67   PRWWTLQFESQIDSMLRSIVQWTHIFLTQIRIRHCSDRSLALVAQRCPNLEVLSIRSCPR 126

Query: 475  VTDETMAKIALACPMLRELDISYCYEVSYKTLELIGKNCPNLRILKRNLMNWLDPSQHTG 654
            VTD++M+KIA  CP LRELDISYCYE+++++L LIG+NC N+++LKRNLMNWLDPSQH G
Sbjct: 127  VTDDSMSKIATGCPNLRELDISYCYEITHESLVLIGRNCSNIKVLKRNLMNWLDPSQHVG 186

Query: 655  VVPNEYLNACPQDGDTEAAAIAKHMPHLLHLEIRFSKLSARGLVMISQGCSNLEFLDLSG 834
            +VP++YLNACPQDGD+EA AIA  MPHL  LEIRFSKL+A+GL  I QGC NLEFLDLSG
Sbjct: 187  IVPDDYLNACPQDGDSEAVAIANSMPHLEGLEIRFSKLTAKGLNSICQGCPNLEFLDLSG 246

Query: 835  CANVTSRDIANSSSQLKSLKDIKKPNFYIPRSVFQTDRYGHWSLYDDRFQTDVFRI 1002
            CAN+TSRDIA +SS L  LKDIKKPNFYIPRSVF T+RYGHWSLYD+RFQTDVFRI
Sbjct: 247  CANLTSRDIAKASSSLSHLKDIKKPNFYIPRSVFHTERYGHWSLYDERFQTDVFRI 302


>ref|XP_003519157.1| PREDICTED: F-box protein SKIP1-like isoform 2 [Glycine max]
          Length = 296

 Score =  436 bits (1121), Expect = e-120
 Identities = 205/297 (69%), Positives = 243/297 (81%)
 Frame = +1

Query: 112  TGSEWSELTHECLVNVFSRLTFDERWRGAMLVCKSWLRANAEPCLNSVFDLQSHFDSATE 291
            T S+WSELT ECL+N+ SRL+ ++RWRG MLVCKSW     EP L+ VF+L   FDS TE
Sbjct: 10   TESDWSELTRECLINILSRLSVEDRWRGTMLVCKSWFSVFKEPSLHFVFNLDPQFDSPTE 69

Query: 292  SPRWWQPRFEYRIDNMLRSVVVWADGALSEIRVSHCSDRSLTLVAQRCPNLQVLSIRSCP 471
            S RWW P FE +IDNMLRSVV WA  +L+ IR+ HCSDRSL LVAQR          SCP
Sbjct: 70   STRWWTPEFEAKIDNMLRSVVEWAQSSLTHIRIRHCSDRSLALVAQR----------SCP 119

Query: 472  NVTDETMAKIALACPMLRELDISYCYEVSYKTLELIGKNCPNLRILKRNLMNWLDPSQHT 651
             VTD+++++IAL+CP LRELDISYCYE+++++L LIG+NCPNL++LKRNLMNWLDPSQH 
Sbjct: 120  RVTDDSISRIALSCPKLRELDISYCYEITHESLVLIGRNCPNLKVLKRNLMNWLDPSQHR 179

Query: 652  GVVPNEYLNACPQDGDTEAAAIAKHMPHLLHLEIRFSKLSARGLVMISQGCSNLEFLDLS 831
            G+VP++YLNACPQDGD EAAAIA  MP L  LEIRFSKL+A+GL  I QGC NLEFLDLS
Sbjct: 180  GIVPDDYLNACPQDGDDEAAAIANSMPGLEQLEIRFSKLTAKGLNSICQGCPNLEFLDLS 239

Query: 832  GCANVTSRDIANSSSQLKSLKDIKKPNFYIPRSVFQTDRYGHWSLYDDRFQTDVFRI 1002
            GCAN+TSRDIAN+SS L  LK+IKKPNFYIPRSVF T+RYGHWSLYD+RFQTD+F+I
Sbjct: 240  GCANLTSRDIANASSSLVHLKEIKKPNFYIPRSVFHTERYGHWSLYDERFQTDIFQI 296