BLASTX nr result

ID: Bupleurum21_contig00003159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003159
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282892.1| PREDICTED: uncharacterized protein LOC100267...   125   5e-27
emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]   125   5e-27
ref|XP_002510189.1| protein binding protein, putative [Ricinus c...    90   4e-16
ref|XP_002301172.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_003589164.1| Zinc finger protein [Medicago truncatula] gi...    77   3e-12

>ref|XP_002282892.1| PREDICTED: uncharacterized protein LOC100267740 [Vitis vinifera]
          Length = 734

 Score =  125 bits (315), Expect = 5e-27
 Identities = 80/191 (41%), Positives = 109/191 (57%), Gaps = 4/191 (2%)
 Frame = -3

Query: 612 SSGNVQLP-LSNSSNPYGLHI--NGYVEGANRDGRPSDSLVGCHISRKRKAMEXXXXXXX 442
           SSG+  LP  S+SS+P+G  I   GY+   N DGR   SL G  +S KRKA+E       
Sbjct: 181 SSGSENLPSASSSSDPFGPRILSGGYLVEEN-DGRAGSSLEGRRLSCKRKALEGNIGQSS 239

Query: 441 XXXXSNYFQHAESSSWHAV-PARQNTGSNLSISMPSQNAIATSQLMQLNPGFGMDIGGIP 265
               S+ FQ  E++ WHAV PAR N G+ LSIS PS N I  S   Q+NP  G+ + G+ 
Sbjct: 240 VGGSSSSFQRTENNVWHAVVPARYNAGNGLSISSPSGNIIGASPAEQVNPRLGLGVRGVA 299

Query: 264 SEIPPVVSATGTTESSHRNLHLRFSLSQQLDSLPTNVSPAVTAVGPLNYTSPHQSLRITP 85
           ++  PV++  G+ ESSHRN  +R + S Q DS+P N+  A  +V   N +S  QS R+ P
Sbjct: 300 TDSLPVLNVPGSAESSHRNFRMRINPSHQQDSVPHNLFSAGGSVRHSNVSSHQQSTRLIP 359

Query: 84  LTTPLDVVSRP 52
           +    D+ S P
Sbjct: 360 VNHAPDLRSTP 370


>emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]
          Length = 1022

 Score =  125 bits (315), Expect = 5e-27
 Identities = 80/191 (41%), Positives = 109/191 (57%), Gaps = 4/191 (2%)
 Frame = -3

Query: 612 SSGNVQLP-LSNSSNPYGLHI--NGYVEGANRDGRPSDSLVGCHISRKRKAMEXXXXXXX 442
           SSG+  LP  S+SS+P+G  I   GY+   N DGR   SL G  +S KRKA+E       
Sbjct: 181 SSGSENLPSASSSSDPFGPRILSGGYLVEEN-DGRAGSSLEGRRLSCKRKALEGNIGQSS 239

Query: 441 XXXXSNYFQHAESSSWHAV-PARQNTGSNLSISMPSQNAIATSQLMQLNPGFGMDIGGIP 265
               S+ FQ  E++ WHAV PAR N G+ LSIS PS N I  S   Q+NP  G+ + G+ 
Sbjct: 240 VGGSSSSFQRTENNVWHAVVPARYNAGNGLSISSPSGNIIGASPAEQVNPRLGLGVRGVA 299

Query: 264 SEIPPVVSATGTTESSHRNLHLRFSLSQQLDSLPTNVSPAVTAVGPLNYTSPHQSLRITP 85
           ++  PV++  G+ ESSHRN  +R + S Q DS+P N+  A  +V   N +S  QS R+ P
Sbjct: 300 TDSLPVLNVPGSAESSHRNFRMRINPSHQQDSVPHNLFSAGGSVRHSNVSSHQQSTRLIP 359

Query: 84  LTTPLDVVSRP 52
           +    D+ S P
Sbjct: 360 VNHAPDLRSTP 370


>ref|XP_002510189.1| protein binding protein, putative [Ricinus communis]
           gi|223550890|gb|EEF52376.1| protein binding protein,
           putative [Ricinus communis]
          Length = 709

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 59/162 (36%), Positives = 84/162 (51%)
 Frame = -3

Query: 552 NGYVEGANRDGRPSDSLVGCHISRKRKAMEXXXXXXXXXXXSNYFQHAESSSWHAVPARQ 373
           +GY+   N D RP  SL G   S KRKA+E           S +FQ ++ S+W  VP R 
Sbjct: 196 SGYIVEEN-DSRPGSSLDGRRQSCKRKAVEGHMGQSSVSESSGFFQCSDGSAWPGVPPRY 254

Query: 372 NTGSNLSISMPSQNAIATSQLMQLNPGFGMDIGGIPSEIPPVVSATGTTESSHRNLHLRF 193
           + G +LSIS PS+         Q+NP  G+ + G+ S+  P ++  G  E+S RN  LR 
Sbjct: 255 DAGGSLSISAPSE---------QMNPRLGLGLRGLASDSIPDLAVAGRPETSQRNFRLRI 305

Query: 192 SLSQQLDSLPTNVSPAVTAVGPLNYTSPHQSLRITPLTTPLD 67
           S S Q +S+P +     +AV   N  S H+S R+ P+   LD
Sbjct: 306 SSSNQ-ESVPPSSFSTGSAVRRSNVPSSHRSSRLLPVNHSLD 346


>ref|XP_002301172.1| predicted protein [Populus trichocarpa] gi|222842898|gb|EEE80445.1|
           predicted protein [Populus trichocarpa]
          Length = 765

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 65/179 (36%), Positives = 88/179 (49%)
 Frame = -3

Query: 549 GYVEGANRDGRPSDSLVGCHISRKRKAMEXXXXXXXXXXXSNYFQHAESSSWHAVPARQN 370
           GY+   N DGRP  SL G   S KRKA+E           S+++Q +ES+ W  VP R +
Sbjct: 196 GYLVEQN-DGRPGCSLDGRRQSCKRKAVEGNIGQSSVAGSSSFYQRSESNPWPGVPNRYD 254

Query: 369 TGSNLSISMPSQNAIATSQLMQLNPGFGMDIGGIPSEIPPVVSATGTTESSHRNLHLRFS 190
            GS+LSIS PS+         Q+NP  G+ + G+  +  P  +     ESSHRN  LR +
Sbjct: 255 AGSSLSISAPSE---------QVNPRLGLGVRGLACDAIPESAVAERAESSHRNFRLRIN 305

Query: 189 LSQQLDSLPTNVSPAVTAVGPLNYTSPHQSLRITPLTTPLDVVSRPRQTLRITPLTTPL 13
            S Q  S P+  S   T V   + +S H+S R  P+   LD  S       ITP   P+
Sbjct: 306 SSNQESSPPSLFSTGST-VRRSSLSSSHRSSRPLPIDHSLDFRSSSAMD-SITPQNQPV 362


>ref|XP_003589164.1| Zinc finger protein [Medicago truncatula]
           gi|355478212|gb|AES59415.1| Zinc finger protein
           [Medicago truncatula]
          Length = 708

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
 Frame = -3

Query: 612 SSGNVQLPLSNSSNPYGLHINGYVEGANRDGRPSDSLVGCHISRKRKAMEXXXXXXXXXX 433
           +SG+  LP   S++ Y           + DGRP  SL    +S KRKA+E          
Sbjct: 187 TSGSFLLPSGGSNSIYL---------GDTDGRPGCSLDTRRVSCKRKAVEGNGGQSSDGG 237

Query: 432 XSNYFQHAESSSWHAVPARQNTGSNLSISMPSQNAIATSQLMQLNPGFGMDIGGIPSEIP 253
            S+Y QH   S+W+ +P +   GSN + S P++         Q+N   G+ +G   SE  
Sbjct: 238 SSSYSQHTVGSAWNTLPTQDYAGSNFNQSAPAE---------QVNARLGLSVGDGSSETI 288

Query: 252 PVVSATGTTESSHRNLHLRFSLSQQLDSLPTNVSPAVTAVGPL--NYTSPHQS---LRIT 88
           P  +  G++ES HRN  LR + S Q  SLP    PA  + G +  N + P  +    R  
Sbjct: 289 PGSTVAGSSESFHRNFRLRINPSSQQISLP----PATFSHGSVIRNSSVPSSAPMLQRYH 344

Query: 87  PLTTPLDVVS 58
           P+  PLD+ S
Sbjct: 345 PINNPLDLRS 354


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