BLASTX nr result

ID: Bupleurum21_contig00003139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003139
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539335.1| PREDICTED: protein CHUP1, chloroplastic-like...   117   1e-24
ref|XP_002313983.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_003539347.1| PREDICTED: protein CHUP1, chloroplastic-like...   113   1e-23
ref|XP_003544301.1| PREDICTED: protein CHUP1, chloroplastic-like...   111   5e-23
ref|XP_002521614.1| conserved hypothetical protein [Ricinus comm...   111   5e-23

>ref|XP_003539335.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 494

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/78 (66%), Positives = 69/78 (88%)
 Frame = -2

Query: 285 WEWMLDTGLIGQMKLSSLVLANEYMKRVAKQLQRGDPSQDEDLLIQSVRFAYRVHQFAGG 106
           WEWMLDTGLIGQMKLSSL LA E+MKRV K+L+  + S++++LL+Q VRFA+RVHQFAGG
Sbjct: 393 WEWMLDTGLIGQMKLSSLKLAREFMKRVTKELESNEVSKEDNLLVQGVRFAFRVHQFAGG 452

Query: 105 FDAKTVHTFEELRKIGTS 52
           FD++T+  F+EL+KIG++
Sbjct: 453 FDSETIQAFQELKKIGSA 470


>ref|XP_002313983.1| predicted protein [Populus trichocarpa] gi|222850391|gb|EEE87938.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/81 (65%), Positives = 67/81 (82%)
 Frame = -2

Query: 285 WEWMLDTGLIGQMKLSSLVLANEYMKRVAKQLQRGDPSQDEDLLIQSVRFAYRVHQFAGG 106
           WEW+L+TGLIGQMKLSSL LA +Y+KR+ K+LQ  + S +E+LL+Q  RFAYRVHQFAGG
Sbjct: 307 WEWLLNTGLIGQMKLSSLRLAKDYLKRITKELQLNECSGEENLLLQGARFAYRVHQFAGG 366

Query: 105 FDAKTVHTFEELRKIGTS*IK 43
           FDA+T H F+EL+KIG   +K
Sbjct: 367 FDAETTHAFQELKKIGMGSLK 387


>ref|XP_003539347.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 474

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/75 (66%), Positives = 66/75 (88%)
 Frame = -2

Query: 285 WEWMLDTGLIGQMKLSSLVLANEYMKRVAKQLQRGDPSQDEDLLIQSVRFAYRVHQFAGG 106
           WEWMLDTGLIGQMKLSSL L+ E+MKRV K+L+  + S++++LL+Q VRFA+RVHQFAGG
Sbjct: 393 WEWMLDTGLIGQMKLSSLKLSREFMKRVTKELESNEASKEDNLLVQGVRFAFRVHQFAGG 452

Query: 105 FDAKTVHTFEELRKI 61
           FD++T+  F+EL+KI
Sbjct: 453 FDSETIQAFQELKKI 467


>ref|XP_003544301.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 449

 Score =  111 bits (278), Expect = 5e-23
 Identities = 48/76 (63%), Positives = 64/76 (84%)
 Frame = -2

Query: 285 WEWMLDTGLIGQMKLSSLVLANEYMKRVAKQLQRGDPSQDEDLLIQSVRFAYRVHQFAGG 106
           WEWMLDTG+IGQMKLSSL +A E+MKR+ K+L+  +  Q+++L +Q V+FA+RVHQFAGG
Sbjct: 350 WEWMLDTGIIGQMKLSSLKMAKEFMKRITKELESNELLQEDNLFVQGVKFAFRVHQFAGG 409

Query: 105 FDAKTVHTFEELRKIG 58
           FD +T+  FEEL+KIG
Sbjct: 410 FDTETIEAFEELKKIG 425


>ref|XP_002521614.1| conserved hypothetical protein [Ricinus communis]
           gi|223539169|gb|EEF40763.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 326

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/78 (64%), Positives = 64/78 (82%)
 Frame = -2

Query: 285 WEWMLDTGLIGQMKLSSLVLANEYMKRVAKQLQRGDPSQDEDLLIQSVRFAYRVHQFAGG 106
           WEW+LD GLIGQMKLSSL +A +Y+KR+ K+LQ  D   +E+LL+Q  RFAYRVHQFAGG
Sbjct: 245 WEWLLDAGLIGQMKLSSLRIAKQYIKRITKELQINDCLFEENLLLQGARFAYRVHQFAGG 304

Query: 105 FDAKTVHTFEELRKIGTS 52
           FD  T++ F+EL+K+GTS
Sbjct: 305 FDTDTINAFQELKKVGTS 322


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