BLASTX nr result

ID: Bupleurum21_contig00003132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003132
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001132582.1| uncharacterized protein LOC100194053 [Zea ma...   181   5e-44
ref|XP_002889925.1| hypothetical protein ARALYDRAFT_471375 [Arab...   180   2e-43
ref|NP_001077523.1| Pentapeptide repeat-containing protein [Arab...   180   2e-43
gb|AAK59627.1| unknown protein [Arabidopsis thaliana]                 180   2e-43
ref|NP_563902.1| Pentapeptide repeat-containing protein [Arabido...   180   2e-43

>ref|NP_001132582.1| uncharacterized protein LOC100194053 [Zea mays]
           gi|194694816|gb|ACF81492.1| unknown [Zea mays]
           gi|195647732|gb|ACG43334.1| hypothetical protein [Zea
           mays] gi|413937988|gb|AFW72539.1| hypothetical protein
           ZEAMMB73_749291 [Zea mays]
          Length = 268

 Score =  181 bits (460), Expect = 5e-44
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = +1

Query: 1   AYLEKAVAYKANFKGADLSDTLMDRMVLNEANLKDAVLVRSVLTRSDLGGALIEGADFSD 180
           AYLEKAVAYKANF GADLSDTLMDRMVLNEANL +AVLVRSVLTRSDLGGA+IEGADFSD
Sbjct: 137 AYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIEGADFSD 196

Query: 181 AVLDLLQKQALCKYASGTNPTTGVSTRTSLGCGNSRRNAY 300
           AV+DL QKQALCKYASGTNP TGVSTR SLGCGNSRRNAY
Sbjct: 197 AVIDLSQKQALCKYASGTNPMTGVSTRKSLGCGNSRRNAY 236



 Score =  129 bits (324), Expect = 3e-28
 Identities = 69/97 (71%), Positives = 77/97 (79%), Gaps = 3/97 (3%)
 Frame = +1

Query: 277 GNSRRNAY---EPKRWKALVSTAVAAAVITFGSDFSALADLNKFEADIRGEFGIGSAAQY 447
           GN+  NA    +  RW A VS A+AAAV+   +   A ADLNKFEA+ RGEFGIGSAAQ+
Sbjct: 42  GNNASNASPAPQQPRWGAAVSAALAAAVVA--ASMPAYADLNKFEAEQRGEFGIGSAAQF 99

Query: 448 GSADLRKAVHTNENFRRANFTSADMRESDFSGSTFNG 558
           GSADL+KAVH NENFRRANFTSADMRESDFSGSTFNG
Sbjct: 100 GSADLKKAVHVNENFRRANFTSADMRESDFSGSTFNG 136


>ref|XP_002889925.1| hypothetical protein ARALYDRAFT_471375 [Arabidopsis lyrata subsp.
           lyrata] gi|297335767|gb|EFH66184.1| hypothetical protein
           ARALYDRAFT_471375 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  180 bits (456), Expect = 2e-43
 Identities = 91/100 (91%), Positives = 94/100 (94%)
 Frame = +1

Query: 1   AYLEKAVAYKANFKGADLSDTLMDRMVLNEANLKDAVLVRSVLTRSDLGGALIEGADFSD 180
           AYLEKAVAYKANF GADLSDTLMDRMVLNEANL +AVLVRSVLTRSDLGGA IEGADFSD
Sbjct: 149 AYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSD 208

Query: 181 AVLDLLQKQALCKYASGTNPTTGVSTRTSLGCGNSRRNAY 300
           AV+DLLQKQALCKYA+GTNP TGV TR SLGCGNSRRNAY
Sbjct: 209 AVIDLLQKQALCKYANGTNPLTGVDTRKSLGCGNSRRNAY 248



 Score =  132 bits (332), Expect = 4e-29
 Identities = 64/86 (74%), Positives = 72/86 (83%)
 Frame = +1

Query: 301 EPKRWKALVSTAVAAAVITFGSDFSALADLNKFEADIRGEFGIGSAAQYGSADLRKAVHT 480
           E   WK ++S A+AAAVI   S   A+A+LN+FEAD RGEFGIGSAAQYGSADL K +H+
Sbjct: 63  ESNTWKRILSAAMAAAVIASSSSVPAMAELNRFEADTRGEFGIGSAAQYGSADLSKTIHS 122

Query: 481 NENFRRANFTSADMRESDFSGSTFNG 558
           NENFRRANFTSADMRESDFSGSTFNG
Sbjct: 123 NENFRRANFTSADMRESDFSGSTFNG 148


>ref|NP_001077523.1| Pentapeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332190737|gb|AEE28858.1| Pentapeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 206

 Score =  180 bits (456), Expect = 2e-43
 Identities = 91/100 (91%), Positives = 94/100 (94%)
 Frame = +1

Query: 1   AYLEKAVAYKANFKGADLSDTLMDRMVLNEANLKDAVLVRSVLTRSDLGGALIEGADFSD 180
           AYLEKAVAYKANF GADLSDTLMDRMVLNEANL +AVLVRSVLTRSDLGGA IEGADFSD
Sbjct: 75  AYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSD 134

Query: 181 AVLDLLQKQALCKYASGTNPTTGVSTRTSLGCGNSRRNAY 300
           AV+DLLQKQALCKYA+GTNP TGV TR SLGCGNSRRNAY
Sbjct: 135 AVIDLLQKQALCKYATGTNPLTGVDTRKSLGCGNSRRNAY 174



 Score =  121 bits (303), Expect = 9e-26
 Identities = 60/74 (81%), Positives = 65/74 (87%)
 Frame = +1

Query: 337 VAAAVITFGSDFSALADLNKFEADIRGEFGIGSAAQYGSADLRKAVHTNENFRRANFTSA 516
           +AAAVI   S   A+A+LN+FEAD RGEFGIGSAAQYGSADL K VH+NENFRRANFTSA
Sbjct: 1   MAAAVIASSSGVPAMAELNRFEADTRGEFGIGSAAQYGSADLSKTVHSNENFRRANFTSA 60

Query: 517 DMRESDFSGSTFNG 558
           DMRESDFSGSTFNG
Sbjct: 61  DMRESDFSGSTFNG 74


>gb|AAK59627.1| unknown protein [Arabidopsis thaliana]
          Length = 280

 Score =  180 bits (456), Expect = 2e-43
 Identities = 91/100 (91%), Positives = 94/100 (94%)
 Frame = +1

Query: 1   AYLEKAVAYKANFKGADLSDTLMDRMVLNEANLKDAVLVRSVLTRSDLGGALIEGADFSD 180
           AYLEKAVAYKANF GADLSDTLMDRMVLNEANL +AVLVRSVLTRSDLGGA IEGADFSD
Sbjct: 149 AYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSD 208

Query: 181 AVLDLLQKQALCKYASGTNPTTGVSTRTSLGCGNSRRNAY 300
           AV+DLLQKQALCKYA+GTNP TGV TR SLGCGNSRRNAY
Sbjct: 209 AVIDLLQKQALCKYATGTNPLTGVDTRKSLGCGNSRRNAY 248



 Score =  136 bits (342), Expect = 3e-30
 Identities = 70/102 (68%), Positives = 80/102 (78%)
 Frame = +1

Query: 253 STRTSLGCGNSRRNAYEPKRWKALVSTAVAAAVITFGSDFSALADLNKFEADIRGEFGIG 432
           S+ T  GC +S     E  +WK ++S A+AAAVI   S   A+A+LN+FEAD RGEFGIG
Sbjct: 51  SSNTREGCCSSA----ESNKWKRILSAAMAAAVIASSSGVPAMAELNRFEADTRGEFGIG 106

Query: 433 SAAQYGSADLRKAVHTNENFRRANFTSADMRESDFSGSTFNG 558
           SAAQYGSADL K VH+NENFRRANFTSADMRESDFSGSTFNG
Sbjct: 107 SAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNG 148


>ref|NP_563902.1| Pentapeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75151954|sp|Q8H1Q1.1|TL225_ARATH RecName:
           Full=Thylakoid lumenal protein At1g12250, chloroplastic;
           Flags: Precursor gi|23297125|gb|AAN13098.1| unknown
           protein [Arabidopsis thaliana]
           gi|332190736|gb|AEE28857.1| Pentapeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 280

 Score =  180 bits (456), Expect = 2e-43
 Identities = 91/100 (91%), Positives = 94/100 (94%)
 Frame = +1

Query: 1   AYLEKAVAYKANFKGADLSDTLMDRMVLNEANLKDAVLVRSVLTRSDLGGALIEGADFSD 180
           AYLEKAVAYKANF GADLSDTLMDRMVLNEANL +AVLVRSVLTRSDLGGA IEGADFSD
Sbjct: 149 AYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSD 208

Query: 181 AVLDLLQKQALCKYASGTNPTTGVSTRTSLGCGNSRRNAY 300
           AV+DLLQKQALCKYA+GTNP TGV TR SLGCGNSRRNAY
Sbjct: 209 AVIDLLQKQALCKYATGTNPLTGVDTRKSLGCGNSRRNAY 248



 Score =  135 bits (339), Expect = 6e-30
 Identities = 70/102 (68%), Positives = 79/102 (77%)
 Frame = +1

Query: 253 STRTSLGCGNSRRNAYEPKRWKALVSTAVAAAVITFGSDFSALADLNKFEADIRGEFGIG 432
           S+ T  GC +S     E   WK ++S A+AAAVI   S   A+A+LN+FEAD RGEFGIG
Sbjct: 51  SSNTREGCCSSA----ESNTWKRILSAAMAAAVIASSSGVPAMAELNRFEADTRGEFGIG 106

Query: 433 SAAQYGSADLRKAVHTNENFRRANFTSADMRESDFSGSTFNG 558
           SAAQYGSADL K VH+NENFRRANFTSADMRESDFSGSTFNG
Sbjct: 107 SAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNG 148


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