BLASTX nr result

ID: Bupleurum21_contig00003059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003059
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285165.1| PREDICTED: uncharacterized protein LOC100253...   120   7e-25
emb|CAN61164.1| hypothetical protein VITISV_001394 [Vitis vinifera]   120   7e-25
ref|XP_004145741.1| PREDICTED: uncharacterized protein LOC101215...   120   1e-24
ref|XP_002328154.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-23
ref|XP_002314267.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-23

>ref|XP_002285165.1| PREDICTED: uncharacterized protein LOC100253658 [Vitis vinifera]
          Length = 167

 Score =  120 bits (302), Expect = 7e-25
 Identities = 68/122 (55%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
 Frame = +3

Query: 414 SPDFRRSV--ARKKTTPSKRMEINGGVGATAKSVPVNVPDWSMILKXXXXXXXXXXXXXX 587
           SP+FR  V  +R    PSKR E      AT  S+PVN+PDWS IL+              
Sbjct: 46  SPEFRNPVPSSRLAKKPSKRGESGDRSTATVGSLPVNIPDWSKILREDYRDNRRREADDD 105

Query: 588 XXXXXXXX-----VPPHEYLARQFARSRVASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 752
                        VPPHE+LARQFAR+R+ASFSV+EGIGRTLKGRDLSRVRNAIWEKTGF
Sbjct: 106 DDDEDDDGDSSSRVPPHEFLARQFARTRIASFSVYEGIGRTLKGRDLSRVRNAIWEKTGF 165

Query: 753 QD 758
           QD
Sbjct: 166 QD 167


>emb|CAN61164.1| hypothetical protein VITISV_001394 [Vitis vinifera]
          Length = 167

 Score =  120 bits (302), Expect = 7e-25
 Identities = 68/122 (55%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
 Frame = +3

Query: 414 SPDFRRSV--ARKKTTPSKRMEINGGVGATAKSVPVNVPDWSMILKXXXXXXXXXXXXXX 587
           SP+FR  V  +R    PSKR E      AT  S+PVN+PDWS IL+              
Sbjct: 46  SPEFRNPVPSSRLAKKPSKRGESGDRSTATVGSLPVNIPDWSKILREDYRDNRRREADDD 105

Query: 588 XXXXXXXX-----VPPHEYLARQFARSRVASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 752
                        VPPHE+LARQFAR+R+ASFSV+EGIGRTLKGRDLSRVRNAIWEKTGF
Sbjct: 106 DDDEDDDGDSSSRVPPHEFLARQFARTRIASFSVYEGIGRTLKGRDLSRVRNAIWEKTGF 165

Query: 753 QD 758
           QD
Sbjct: 166 QD 167


>ref|XP_004145741.1| PREDICTED: uncharacterized protein LOC101215539 [Cucumis sativus]
           gi|449516802|ref|XP_004165435.1| PREDICTED:
           uncharacterized protein LOC101231271 [Cucumis sativus]
          Length = 165

 Score =  120 bits (301), Expect = 1e-24
 Identities = 63/113 (55%), Positives = 75/113 (66%), Gaps = 5/113 (4%)
 Frame = +3

Query: 435 VARKKTTPSKRMEINGGVGAT-AKSVPVNVPDWSMILKXXXXXXXXXXXXXXXXXXXXXX 611
           +A+KK +  + +E+ GG G   A S+PVN+PDWS ILK                      
Sbjct: 53  IAKKKVSSKRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEE 112

Query: 612 ----VPPHEYLARQFARSRVASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 758
               VPPHE+LARQ AR+R+ASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF+D
Sbjct: 113 EEMRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 165


>ref|XP_002328154.1| predicted protein [Populus trichocarpa] gi|222837669|gb|EEE76034.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  117 bits (292), Expect = 1e-23
 Identities = 70/126 (55%), Positives = 76/126 (60%), Gaps = 11/126 (8%)
 Frame = +3

Query: 414 SPDFRRSVAR----KKTT-------PSKRMEINGGVGATAKSVPVNVPDWSMILKXXXXX 560
           SPDFR+ V      KK+T       P+   E  GG   T  S+PVN+PDWS ILK     
Sbjct: 49  SPDFRKPVLSPRLVKKSTSAAAACRPTDSREKTGG---TPSSLPVNIPDWSRILKNE--- 102

Query: 561 XXXXXXXXXXXXXXXXXVPPHEYLARQFARSRVASFSVHEGIGRTLKGRDLSRVRNAIWE 740
                            VPPHE L RQ ARSR+ASFSVHEGIGRTLKGRDLSRVRNAIWE
Sbjct: 103 -----------------VPPHELLVRQMARSRIASFSVHEGIGRTLKGRDLSRVRNAIWE 145

Query: 741 KTGFQD 758
           KTGFQD
Sbjct: 146 KTGFQD 151


>ref|XP_002314267.1| predicted protein [Populus trichocarpa] gi|222850675|gb|EEE88222.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  116 bits (290), Expect = 2e-23
 Identities = 68/134 (50%), Positives = 78/134 (58%), Gaps = 19/134 (14%)
 Frame = +3

Query: 414 SPDFRRSVAR----KKTTPS----KRMEINGGVGATAKSVPVNVPDWSMILKXXXXXXXX 569
           SP+FR+ V      KK+TP+    +R +  G    T  S+PVN+PDWS ILK        
Sbjct: 49  SPEFRKPVLSSRLAKKSTPAAAACRRTDPGGRACGTPSSLPVNIPDWSKILKDEYRRGPD 108

Query: 570 XXXXXXXXXXXXXX-----------VPPHEYLARQFARSRVASFSVHEGIGRTLKGRDLS 716
                                    VPPHE LARQ AR+R+ASFSVHEGIGRTLKGRDLS
Sbjct: 109 VVDGGGGDEDDDDMDGDDCFDGGVRVPPHELLARQMARTRIASFSVHEGIGRTLKGRDLS 168

Query: 717 RVRNAIWEKTGFQD 758
           RVRNAIWEKTGFQD
Sbjct: 169 RVRNAIWEKTGFQD 182


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