BLASTX nr result

ID: Bupleurum21_contig00003034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003034
         (1104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46999.1| unknown [Lotus japonicus]                              134   4e-29
ref|NP_001236744.1| uncharacterized protein LOC100499840 [Glycin...   129   1e-27
ref|NP_001236363.1| uncharacterized protein LOC100527715 [Glycin...   129   1e-27
emb|CBI30040.3| unnamed protein product [Vitis vinifera]              125   2e-26
ref|XP_002278395.1| PREDICTED: mitochondrial import inner membra...   125   2e-26

>gb|AFK46999.1| unknown [Lotus japonicus]
          Length = 162

 Score =  134 bits (337), Expect = 4e-29
 Identities = 66/75 (88%), Positives = 67/75 (89%)
 Frame = -3

Query: 442 SSTMKVIKGATSGFVAGTIWGTVVATWNDVPRVERRVALPGLIRTLKMMGNHGLTFAAIG 263
           SS MK IKGAT+G VAGTIWGTVVATW DVPRVER VALPGLIRT KMMGNHGLTFAAIG
Sbjct: 17  SSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTFKMMGNHGLTFAAIG 76

Query: 262 GVYIGAEQLVQNFVG 218
           GVYIG EQLVQNF G
Sbjct: 77  GVYIGVEQLVQNFRG 91


>ref|NP_001236744.1| uncharacterized protein LOC100499840 [Glycine max]
           gi|255627053|gb|ACU13871.1| unknown [Glycine max]
          Length = 160

 Score =  129 bits (325), Expect = 1e-27
 Identities = 63/73 (86%), Positives = 66/73 (90%)
 Frame = -3

Query: 442 SSTMKVIKGATSGFVAGTIWGTVVATWNDVPRVERRVALPGLIRTLKMMGNHGLTFAAIG 263
           SS MK IKGAT+G VAGTIWGTVVATW DVPRVER VALPGLIRT KMMGN+GLTFAAIG
Sbjct: 15  SSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTFKMMGNYGLTFAAIG 74

Query: 262 GVYIGAEQLVQNF 224
           GVYIG EQLVQN+
Sbjct: 75  GVYIGVEQLVQNY 87


>ref|NP_001236363.1| uncharacterized protein LOC100527715 [Glycine max]
           gi|255633032|gb|ACU16871.1| unknown [Glycine max]
          Length = 160

 Score =  129 bits (324), Expect = 1e-27
 Identities = 62/73 (84%), Positives = 67/73 (91%)
 Frame = -3

Query: 442 SSTMKVIKGATSGFVAGTIWGTVVATWNDVPRVERRVALPGLIRTLKMMGNHGLTFAAIG 263
           SS MK IKGAT+G VAGTIWGTVVATW DVPRVER VALPGLIRT++MMGN+GLTFAAIG
Sbjct: 15  SSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTIRMMGNYGLTFAAIG 74

Query: 262 GVYIGAEQLVQNF 224
           GVYIG EQLVQN+
Sbjct: 75  GVYIGVEQLVQNY 87


>emb|CBI30040.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  125 bits (313), Expect = 2e-26
 Identities = 57/73 (78%), Positives = 69/73 (94%)
 Frame = -3

Query: 442 SSTMKVIKGATSGFVAGTIWGTVVATWNDVPRVERRVALPGLIRTLKMMGNHGLTFAAIG 263
           +STMKVIKGATSG V GTIWGT+VA+W+DVPRVE+ VALPGLIRTLKMMG++G+TFAAIG
Sbjct: 45  TSTMKVIKGATSGLVIGTIWGTIVASWHDVPRVEKHVALPGLIRTLKMMGSYGMTFAAIG 104

Query: 262 GVYIGAEQLVQNF 224
           GVY+G EQL++N+
Sbjct: 105 GVYMGVEQLLENY 117


>ref|XP_002278395.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           TIM22 [Vitis vinifera]
          Length = 158

 Score =  125 bits (313), Expect = 2e-26
 Identities = 57/73 (78%), Positives = 69/73 (94%)
 Frame = -3

Query: 442 SSTMKVIKGATSGFVAGTIWGTVVATWNDVPRVERRVALPGLIRTLKMMGNHGLTFAAIG 263
           +STMKVIKGATSG V GTIWGT+VA+W+DVPRVE+ VALPGLIRTLKMMG++G+TFAAIG
Sbjct: 14  TSTMKVIKGATSGLVIGTIWGTIVASWHDVPRVEKHVALPGLIRTLKMMGSYGMTFAAIG 73

Query: 262 GVYIGAEQLVQNF 224
           GVY+G EQL++N+
Sbjct: 74  GVYMGVEQLLENY 86


Top