BLASTX nr result

ID: Bupleurum21_contig00003032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003032
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g...   282   1e-73
ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|2...   282   1e-73
gb|ABK95423.1| unknown [Populus trichocarpa]                          282   1e-73
ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|2...   281   1e-73
ref|XP_003527575.1| PREDICTED: KH domain-containing protein At5g...   281   2e-73

>ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g56140-like [Glycine
           max]
          Length = 291

 Score =  282 bits (721), Expect = 1e-73
 Identities = 137/153 (89%), Positives = 150/153 (98%)
 Frame = +1

Query: 67  IVKRTIRVDIPVDVYPNFNFVGRLLGPRGNSLKRVEATTDCRVLIRGRGSIKDPVKEEIM 246
           IVK+T+RVDIPVD YPNFNFVGRLLGPRGNSLKRVEA+T+CRVLIRGRGSIKDP +EE+M
Sbjct: 139 IVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMM 198

Query: 247 RGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDESQDFYKKQQLQELA 426
           RGKPGYEHLNEPLHILVEAELPVEI+DARLMQAREILEDLLKPVDESQDFYKKQQL+ELA
Sbjct: 199 RGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESQDFYKKQQLRELA 258

Query: 427 LINGTLRDEGSHMSGSVSPFNSSLGMKRAKTRG 525
           ++NGTLR+EGS MSGSVSPF++SLGMKRAKTRG
Sbjct: 259 MLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 291


>ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|222872135|gb|EEF09266.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score =  282 bits (721), Expect = 1e-73
 Identities = 141/172 (81%), Positives = 152/172 (88%)
 Frame = +1

Query: 10  LQPSPAXXXXXXXXXXXXXIVKRTIRVDIPVDVYPNFNFVGRLLGPRGNSLKRVEATTDC 189
           LQPS A             I KRTIRVDIPVD YPN+NFVGRLLGPRGNSLKRVEA+T+C
Sbjct: 130 LQPSSAQNWLSSQGSSSGLIAKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTEC 189

Query: 190 RVLIRGRGSIKDPVKEEIMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLL 369
           RVLIRGRGSIKDP KEE+MRGKPGYEHLNEPLHILVE ELPVEI+DARLMQA EILEDLL
Sbjct: 190 RVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHILVEGELPVEIVDARLMQASEILEDLL 249

Query: 370 KPVDESQDFYKKQQLQELALINGTLRDEGSHMSGSVSPFNSSLGMKRAKTRG 525
           KPVDESQD+YKKQQL+ELA++NGTLR+EGS MSGSVSPFN+SLGMKRAKTRG
Sbjct: 250 KPVDESQDYYKKQQLRELAMLNGTLREEGSPMSGSVSPFNNSLGMKRAKTRG 301


>gb|ABK95423.1| unknown [Populus trichocarpa]
          Length = 176

 Score =  282 bits (721), Expect = 1e-73
 Identities = 141/172 (81%), Positives = 152/172 (88%)
 Frame = +1

Query: 10  LQPSPAXXXXXXXXXXXXXIVKRTIRVDIPVDVYPNFNFVGRLLGPRGNSLKRVEATTDC 189
           LQPS A             I KRTIRVDIPVD YPN+NFVGRLLGPRGNSLKRVEA+T+C
Sbjct: 5   LQPSSAQNWLSSQGSSSGLIAKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTEC 64

Query: 190 RVLIRGRGSIKDPVKEEIMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLL 369
           RVLIRGRGSIKDP KEE+MRGKPGYEHLNEPLHILVE ELPVEI+DARLMQA EILEDLL
Sbjct: 65  RVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHILVEGELPVEIVDARLMQASEILEDLL 124

Query: 370 KPVDESQDFYKKQQLQELALINGTLRDEGSHMSGSVSPFNSSLGMKRAKTRG 525
           KPVDESQD+YKKQQL+ELA++NGTLR+EGS MSGSVSPFN+SLGMKRAKTRG
Sbjct: 125 KPVDESQDYYKKQQLRELAMLNGTLREEGSPMSGSVSPFNNSLGMKRAKTRG 176


>ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|222846331|gb|EEE83878.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  281 bits (720), Expect = 1e-73
 Identities = 140/172 (81%), Positives = 153/172 (88%)
 Frame = +1

Query: 10  LQPSPAXXXXXXXXXXXXXIVKRTIRVDIPVDVYPNFNFVGRLLGPRGNSLKRVEATTDC 189
           LQPS A             IVKRTIRVDIPVD YPN+NFVGRLLGPRGNSLKRVEA+T+C
Sbjct: 131 LQPSSAQNWLSSQGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTEC 190

Query: 190 RVLIRGRGSIKDPVKEEIMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLL 369
           RVLIRGRGSIKDP +E++MRGKPGYEHLNEPLHILVE ELPVEI+DARLMQAREILEDLL
Sbjct: 191 RVLIRGRGSIKDPAREDMMRGKPGYEHLNEPLHILVEGELPVEIVDARLMQAREILEDLL 250

Query: 370 KPVDESQDFYKKQQLQELALINGTLRDEGSHMSGSVSPFNSSLGMKRAKTRG 525
           +PVDESQD+YKKQQL+ELAL+NGT R+EGS MSGSVSPFN+SLGMKRAKTRG
Sbjct: 251 RPVDESQDYYKKQQLRELALLNGTFREEGSPMSGSVSPFNNSLGMKRAKTRG 302


>ref|XP_003527575.1| PREDICTED: KH domain-containing protein At5g56140-like [Glycine
           max]
          Length = 292

 Score =  281 bits (718), Expect = 2e-73
 Identities = 136/153 (88%), Positives = 150/153 (98%)
 Frame = +1

Query: 67  IVKRTIRVDIPVDVYPNFNFVGRLLGPRGNSLKRVEATTDCRVLIRGRGSIKDPVKEEIM 246
           IVK+T+RVDIPVD YPNFNFVGRLLGPRGNSLKRVEA+T+CRVLIRGRGSIKDP +EE+M
Sbjct: 140 IVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMM 199

Query: 247 RGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDESQDFYKKQQLQELA 426
           RGKPGYEHLNEPLHILVEAELPVEI+DARLMQAR+ILEDLLKPVDESQDFYKKQQL+ELA
Sbjct: 200 RGKPGYEHLNEPLHILVEAELPVEIVDARLMQARDILEDLLKPVDESQDFYKKQQLRELA 259

Query: 427 LINGTLRDEGSHMSGSVSPFNSSLGMKRAKTRG 525
           ++NGTLR+EGS MSGSVSPF++SLGMKRAKTRG
Sbjct: 260 MLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 292


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