BLASTX nr result

ID: Bupleurum21_contig00003023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003023
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA81866.1| unknown [Solanum tuberosum]                            271   5e-71
ref|XP_002283637.1| PREDICTED: mitochondrial import inner membra...   241   7e-62
ref|XP_004157888.1| PREDICTED: mitochondrial import inner membra...   240   1e-61
ref|XP_004135673.1| PREDICTED: mitochondrial import inner membra...   231   5e-59
ref|XP_004157284.1| PREDICTED: mitochondrial import inner membra...   231   7e-59

>gb|ABA81866.1| unknown [Solanum tuberosum]
          Length = 236

 Score =  271 bits (694), Expect = 5e-71
 Identities = 135/183 (73%), Positives = 143/183 (78%), Gaps = 8/183 (4%)
 Frame = +3

Query: 6   MGTPETSREPCPDRILDDXXXXXXXXXXXXXXFHFLKGIYNSPKGERFIGGTQAVRMNAP 185
           MGTPETSREPCPDRILDD              FHFLKGIYNSPKGER IGGTQAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERLIGGTQAVRMNAP 60

Query: 186 RVGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQXXXXXXXXXXXXX 365
           R+GGSFAVWGGLFSTFDCTMVY+RQKEDPWNSIIAGAATGGFLQMRQ             
Sbjct: 61  RIGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLQMRQGLGAASRSAMFGG 120

Query: 366 VLLALIEGAGIMLNKLMSAQQNFPPMEEPLPNMPGIPGY--------QMGPLPGQAPVNI 521
           VLLALIEGAGIMLNK+MSA QNFPPM+EPLPN+PG+PGY         MG LPGQAPV+I
Sbjct: 121 VLLALIEGAGIMLNKVMSAPQNFPPMDEPLPNVPGVPGYPPGQLPGQPMGKLPGQAPVSI 180

Query: 522 ESM 530
           + M
Sbjct: 181 DGM 183


>ref|XP_002283637.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Vitis vinifera]
          Length = 226

 Score =  241 bits (615), Expect = 7e-62
 Identities = 125/172 (72%), Positives = 130/172 (75%), Gaps = 3/172 (1%)
 Frame = +3

Query: 6   MGTPETSREPCPDRILDDXXXXXXXXXXXXXXFHFLKGIYNSPKGERFIGGTQAVRMNAP 185
           MGTPETSREPCPDRILDD              FHFLKGIYNSPKGER IGG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAP 60

Query: 186 RVGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQXXXXXXXXXXXXX 365
           RVGGSFAVWGGLFS FDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQ             
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLAASTRSAIFGG 120

Query: 366 VLLALIEGAGIMLNKLMSAQQNFP-PMEEPLPNM-PG-IPGYQMGPLPGQAP 512
           VLL LIEGAGIMLNK++SA QN P  MEEP+P M PG + GY MG LPG  P
Sbjct: 121 VLLGLIEGAGIMLNKVLSAPQNLPMTMEEPVPGMTPGPVSGYPMGQLPGMTP 172


>ref|XP_004157888.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Cucumis sativus]
          Length = 237

 Score =  240 bits (613), Expect = 1e-61
 Identities = 119/169 (70%), Positives = 127/169 (75%)
 Frame = +3

Query: 6   MGTPETSREPCPDRILDDXXXXXXXXXXXXXXFHFLKGIYNSPKGERFIGGTQAVRMNAP 185
           MGTPETSREPCPDRILDD              FHF+KG+YNSP+G R IGGTQAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGLYNSPRGTRIIGGTQAVRMNAP 60

Query: 186 RVGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQXXXXXXXXXXXXX 365
           RVGGSFAVWGGLFS FDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQ             
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSALFGG 120

Query: 366 VLLALIEGAGIMLNKLMSAQQNFPPMEEPLPNMPGIPGYQMGPLPGQAP 512
           VLLALIEGAGIMLNK++S QQN P + E    M G+PGY  G LPG+AP
Sbjct: 121 VLLALIEGAGIMLNKVLSQQQNMPVVIEEPAGMGGVPGYPTGQLPGRAP 169


>ref|XP_004135673.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Cucumis sativus]
          Length = 226

 Score =  231 bits (590), Expect = 5e-59
 Identities = 115/174 (66%), Positives = 126/174 (72%)
 Frame = +3

Query: 6   MGTPETSREPCPDRILDDXXXXXXXXXXXXXXFHFLKGIYNSPKGERFIGGTQAVRMNAP 185
           MGTPETSREPCPDRILDD              FHFLKGIY+SPKG R +GG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGIYSSPKGSRLLGGSQAVRMNAP 60

Query: 186 RVGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQXXXXXXXXXXXXX 365
           R+GGSFAVWGGLFSTFDC+MVY+RQKEDPWNSIIAGAATGGFLQMRQ             
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSALFGG 120

Query: 366 VLLALIEGAGIMLNKLMSAQQNFPPMEEPLPNMPGIPGYQMGPLPGQAPVNIES 527
           VLLALIEGAGIMLNK++S  QN P M +    M G+PGY M  +PG  P    S
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMAGVPGYPMDQIPGLTPPGTSS 174


>ref|XP_004157284.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Cucumis sativus]
          Length = 226

 Score =  231 bits (589), Expect = 7e-59
 Identities = 115/174 (66%), Positives = 126/174 (72%)
 Frame = +3

Query: 6   MGTPETSREPCPDRILDDXXXXXXXXXXXXXXFHFLKGIYNSPKGERFIGGTQAVRMNAP 185
           MGTPETSREPCPDRILDD              FHFLKGIY+SPKG R +GG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGIYSSPKGARLLGGSQAVRMNAP 60

Query: 186 RVGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQXXXXXXXXXXXXX 365
           R+GGSFAVWGGLFSTFDC+MVY+RQKEDPWNSIIAGAATGGFLQMRQ             
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSALFGG 120

Query: 366 VLLALIEGAGIMLNKLMSAQQNFPPMEEPLPNMPGIPGYQMGPLPGQAPVNIES 527
           VLLALIEGAGIMLNK++S  QN P M +    M G+PGY M  +PG  P    S
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMAGVPGYPMDQIPGLTPPGTSS 174


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