BLASTX nr result

ID: Bupleurum21_contig00003022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003022
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA81866.1| unknown [Solanum tuberosum]                            270   7e-71
emb|CBI27999.3| unnamed protein product [Vitis vinifera]              252   3e-65
ref|XP_002283637.1| PREDICTED: mitochondrial import inner membra...   252   3e-65
ref|XP_003547748.1| PREDICTED: mitochondrial import inner membra...   245   2e-63
ref|XP_003516788.1| PREDICTED: mitochondrial import inner membra...   245   3e-63

>gb|ABA81866.1| unknown [Solanum tuberosum]
          Length = 236

 Score =  270 bits (691), Expect = 7e-71
 Identities = 130/153 (84%), Positives = 137/153 (89%)
 Frame = +3

Query: 30  MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGIYNSPKGERFIGGTQAVRMNAP 209
           MGTPETSREPCPDRILDD+             FHFLKGIYNSPKGER IGGTQAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERLIGGTQAVRMNAP 60

Query: 210 RVGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLGAASKSAAFGG 389
           R+GGSFAVWGGLFSTFDCTMVY+RQKEDPWNSIIAGAATGGFLQMRQGLGAAS+SA FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLQMRQGLGAASRSAMFGG 120

Query: 390 VLLALIEGAGIMLNKVLSAQQNFPPMEEPLPNM 488
           VLLALIEGAGIMLNKV+SA QNFPPM+EPLPN+
Sbjct: 121 VLLALIEGAGIMLNKVMSAPQNFPPMDEPLPNV 153


>emb|CBI27999.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  252 bits (643), Expect = 3e-65
 Identities = 125/154 (81%), Positives = 131/154 (85%), Gaps = 1/154 (0%)
 Frame = +3

Query: 30  MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGIYNSPKGERFIGGTQAVRMNAP 209
           MGTPETSREPCPDRILDD+             FHFLKGIYNSPKGER IGG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAP 60

Query: 210 RVGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLGAASKSAAFGG 389
           RVGGSFAVWGGLFS FDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGL A+++SA FGG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLAASTRSAIFGG 120

Query: 390 VLLALIEGAGIMLNKVLSAQQNFP-PMEEPLPNM 488
           VLL LIEGAGIMLNKVLSA QN P  MEEP+P M
Sbjct: 121 VLLGLIEGAGIMLNKVLSAPQNLPMTMEEPVPGM 154


>ref|XP_002283637.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Vitis vinifera]
          Length = 226

 Score =  252 bits (643), Expect = 3e-65
 Identities = 125/154 (81%), Positives = 131/154 (85%), Gaps = 1/154 (0%)
 Frame = +3

Query: 30  MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGIYNSPKGERFIGGTQAVRMNAP 209
           MGTPETSREPCPDRILDD+             FHFLKGIYNSPKGER IGG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAP 60

Query: 210 RVGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLGAASKSAAFGG 389
           RVGGSFAVWGGLFS FDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGL A+++SA FGG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLAASTRSAIFGG 120

Query: 390 VLLALIEGAGIMLNKVLSAQQNFP-PMEEPLPNM 488
           VLL LIEGAGIMLNKVLSA QN P  MEEP+P M
Sbjct: 121 VLLGLIEGAGIMLNKVLSAPQNLPMTMEEPVPGM 154


>ref|XP_003547748.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Glycine max]
          Length = 200

 Score =  245 bits (626), Expect = 2e-63
 Identities = 120/152 (78%), Positives = 129/152 (84%), Gaps = 1/152 (0%)
 Frame = +3

Query: 30  MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGIYNSPKGERFIGGTQAVRMNAP 209
           MGTPETSREPCPDRILDDI             FHFLKG+YNSPKG+RF+G TQAVR+NAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGDRFVGATQAVRLNAP 60

Query: 210 RVGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLGAASKSAAFGG 389
           RVGGSFAVWGGLFS FDCTMVY RQKEDPWNSI+AGAATGGFL MRQGLGA+++SAAFGG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYARQKEDPWNSIVAGAATGGFLSMRQGLGASARSAAFGG 120

Query: 390 VLLALIEGAGIMLNKVLSAQQNFPP-MEEPLP 482
           VLLALIEGAGIMLNK LSAQQ  P  M+EP P
Sbjct: 121 VLLALIEGAGIMLNKFLSAQQPMPMIMDEPQP 152


>ref|XP_003516788.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Glycine max]
          Length = 200

 Score =  245 bits (625), Expect = 3e-63
 Identities = 118/151 (78%), Positives = 128/151 (84%)
 Frame = +3

Query: 30  MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGIYNSPKGERFIGGTQAVRMNAP 209
           MGTPETSREPCPDRILDDI             FHFLKG+YNSPKG+RF+G TQAVR+NAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGDRFVGATQAVRLNAP 60

Query: 210 RVGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLGAASKSAAFGG 389
           RVGGSFAVWGGLFS FDCTMVY RQKEDPWNSI+AGAATGGFL MRQGLGA+++SAAFGG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYARQKEDPWNSIVAGAATGGFLSMRQGLGASARSAAFGG 120

Query: 390 VLLALIEGAGIMLNKVLSAQQNFPPMEEPLP 482
           VLLALIEGAGIMLNK LSAQQ  P + + LP
Sbjct: 121 VLLALIEGAGIMLNKFLSAQQPMPMIMDELP 151


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