BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003005
         (1970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264701.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   674   0.0  
gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum]         670   0.0  
gb|ADJ68231.1| DEAD box RNA helicase [Populus alba x Populus tre...   626   e-177
ref|XP_002326399.1| predicted protein [Populus trichocarpa] gi|2...   625   e-176
ref|XP_003552095.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   616   e-174

>ref|XP_002264701.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Vitis
            vinifera] gi|297740016|emb|CBI30198.3| unnamed protein
            product [Vitis vinifera]
          Length = 473

 Score =  674 bits (1740), Expect = 0.0
 Identities = 341/444 (76%), Positives = 380/444 (85%), Gaps = 1/444 (0%)
 Frame = +2

Query: 245  SLSVDSSKKANEFLDDPDASRIEAVTSGDTPYTSAKTFEDLNLSPDLLKGLYVEMKFQRP 424
            SL++    K  E LD+P  S I+AVTSGDTPYTSA TFEDLNLSP+LL+G+Y EMKF+RP
Sbjct: 34   SLTIHDEAKEAESLDEPKDSSIQAVTSGDTPYTSASTFEDLNLSPELLRGIYSEMKFERP 93

Query: 425  SKIQAISLPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKLAAPQALCICPTRELA 604
            SKIQAISLPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKL  PQALCICPTRELA
Sbjct: 94   SKIQAISLPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKLQVPQALCICPTRELA 153

Query: 605  IQNMEVLLRMGKFTGITSELAIPMDEG-YLPISKRAPVTKQVVIGTPGTINKWFTAKKLG 781
            IQN+EVL +MGK TGI SE AIPMD   Y  IS+R PV  QVVIGTPGT+ KW + +KLG
Sbjct: 154  IQNLEVLRKMGKHTGIESECAIPMDSANYTSISQRPPVKAQVVIGTPGTVKKWMSHRKLG 213

Query: 782  MGSMNVLVFDEADHMLAESGFRQDSERIMKGIVKIKPDCQVLLFSATFNDAVKAFASKIV 961
            + +M +LVFDEADHMLAE GF+ DS RIMK I K    CQVLLFSATFND VK F ++IV
Sbjct: 214  ISNMKILVFDEADHMLAEDGFKDDSLRIMKAIEKSGAQCQVLLFSATFNDTVKNFVTRIV 273

Query: 962  KEISVKDHNQLFVKREELSLDSLKQYKVYCPDELSKILVIKDKILEIGQKVGQTIIFVRT 1141
            K     D+NQ+FVK+EELSL S+KQYKV CPDELSKILVIKDKI EIGQK+GQTIIFVRT
Sbjct: 274  K-----DYNQMFVKKEELSLQSVKQYKVKCPDELSKILVIKDKIFEIGQKLGQTIIFVRT 328

Query: 1142 RNSASMLHKTLVDYGYEVTTIQGALKQEDRDKIVKEFKEGLTQVLISTDLLARGFDQSQV 1321
            +NSA MLHK LVD+GYEVTTIQGAL+QEDRDKI+KEFK+GLTQVLISTDLLARGFDQS+V
Sbjct: 329  KNSAGMLHKALVDFGYEVTTIQGALRQEDRDKIIKEFKDGLTQVLISTDLLARGFDQSRV 388

Query: 1322 NLVVNYDLPLKYDTRGEPDYEVYLHRIGRAGRFGRKGAVFNLLFDDRDKMLMSKIENHFD 1501
            NLVVNYDLPLKY T+ EPDYEVYLHRIGRAGRFGRKGAVFNLL  D+D +L+SKIENHF 
Sbjct: 389  NLVVNYDLPLKYGTQAEPDYEVYLHRIGRAGRFGRKGAVFNLLCSDKDNILISKIENHFG 448

Query: 1502 HQVAEVASWQSDADFEDALKKAGL 1573
             Q+AE+ SWQ+D DFE A+K AGL
Sbjct: 449  VQIAEIPSWQNDDDFEAAMKDAGL 472


>gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum]
          Length = 501

 Score =  670 bits (1729), Expect = 0.0
 Identities = 334/445 (75%), Positives = 389/445 (87%), Gaps = 1/445 (0%)
 Frame = +2

Query: 245  SLSVDSSKKANEFLDDPDASRIEAVTSGDTPYTSAKTFEDLNLSPDLLKGLYVEMKFQRP 424
            +L +D SKK N+FLD+P+ S I+AVT+G+TPYTSA TFE+LNLSP+LLKGLYVEMKF++P
Sbjct: 61   NLKIDESKKINKFLDEPEDSNIKAVTAGETPYTSAFTFEELNLSPELLKGLYVEMKFEKP 120

Query: 425  SKIQAISLPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKLAAPQALCICPTRELA 604
            SKIQAISLPMILTPP+ +LIAQAHNGSGKTTCF LGMLSRVDP L APQALCICPTRELA
Sbjct: 121  SKIQAISLPMILTPPHLDLIAQAHNGSGKTTCFTLGMLSRVDPNLKAPQALCICPTRELA 180

Query: 605  IQNMEVLLRMGKFTGITSELAIPMDEG-YLPISKRAPVTKQVVIGTPGTINKWFTAKKLG 781
            IQN+EVL +MGK TGITSE AIPMD   Y+PI+KRAP+  QVVIGTPGTI KW +AKKLG
Sbjct: 181  IQNLEVLRKMGKHTGITSECAIPMDSSNYIPINKRAPIIAQVVIGTPGTIKKWMSAKKLG 240

Query: 782  MGSMNVLVFDEADHMLAESGFRQDSERIMKGIVKIKPDCQVLLFSATFNDAVKAFASKIV 961
            + ++ VLVFDEADHMLAE GF+ DS RIM+ I K+   CQVLLFSATF+D VK F SKIV
Sbjct: 241  VSNVKVLVFDEADHMLAEDGFKDDSLRIMRDIEKMSSHCQVLLFSATFSDTVKNFVSKIV 300

Query: 962  KEISVKDHNQLFVKREELSLDSLKQYKVYCPDELSKILVIKDKILEIGQKVGQTIIFVRT 1141
            K    +DHNQLFVK+EELSL+S+KQYKV  PDELSK+LVIKD+ILE G+++GQTIIFVRT
Sbjct: 301  K----RDHNQLFVKKEELSLESVKQYKVNVPDELSKVLVIKDRILEFGERLGQTIIFVRT 356

Query: 1142 RNSASMLHKTLVDYGYEVTTIQGALKQEDRDKIVKEFKEGLTQVLISTDLLARGFDQSQV 1321
            RNSASMLHK LV++GY+VTTIQGAL Q +RDKIVKEFK+GLTQVLISTDLLARGFDQ QV
Sbjct: 357  RNSASMLHKALVEFGYDVTTIQGALNQAERDKIVKEFKDGLTQVLISTDLLARGFDQQQV 416

Query: 1322 NLVVNYDLPLKYDTRGEPDYEVYLHRIGRAGRFGRKGAVFNLLFDDRDKMLMSKIENHFD 1501
            NLV+NYDLP+K+D R EPD EVYLHRIGRAGRFGRKGAVFNLL  D D+M++SKIENHFD
Sbjct: 417  NLVINYDLPVKHDNRVEPDCEVYLHRIGRAGRFGRKGAVFNLLCGDMDQMIISKIENHFD 476

Query: 1502 HQVAEVASWQSDADFEDALKKAGLM 1576
             ++AEV  W+++ DF+ AL+ AGL+
Sbjct: 477  SKIAEVPDWRNEEDFKAALRSAGLL 501


>gb|ADJ68231.1| DEAD box RNA helicase [Populus alba x Populus tremula var.
            glandulosa]
          Length = 492

 Score =  626 bits (1614), Expect = e-177
 Identities = 314/445 (70%), Positives = 374/445 (84%), Gaps = 1/445 (0%)
 Frame = +2

Query: 245  SLSVDSSKKANEFLDDPDASRIEAVTSGDTPYTSAKTFEDLNLSPDLLKGLYVEMKFQRP 424
            +L++D + K N+FLD+P+ SRI+AVT+GDTPYTSA TFEDLNLSP+LLKGLYVEMKFQ+P
Sbjct: 53   ALAIDENTKVNKFLDEPEDSRIQAVTTGDTPYTSASTFEDLNLSPELLKGLYVEMKFQKP 112

Query: 425  SKIQAISLPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKLAAPQALCICPTRELA 604
            SKIQAISLPMI+TPPYK+LIAQAHNGSGKTTCFVLGMLSRVDP+L  PQALCICPTREL+
Sbjct: 113  SKIQAISLPMIMTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPQLQRPQALCICPTRELS 172

Query: 605  IQNMEVLLRMGKFTGITSELAIPMDEGYLPISK-RAPVTKQVVIGTPGTINKWFTAKKLG 781
            IQNMEVL +MGK+TGI+SE A+P++      SK R P++ QVVIGTPGTI +  + KKLG
Sbjct: 173  IQNMEVLRKMGKYTGISSECAVPIESRNNDRSKSRPPISAQVVIGTPGTIKRLMSQKKLG 232

Query: 782  MGSMNVLVFDEADHMLAESGFRQDSERIMKGIVKIKPDCQVLLFSATFNDAVKAFASKIV 961
            +  M VLVFDEADHMLA+ GF+ DS RIMK I +    CQVLLFSATF++ VK F SK+V
Sbjct: 233  VTDMKVLVFDEADHMLAKDGFQDDSLRIMKDIQRFNSHCQVLLFSATFDETVKNFVSKVV 292

Query: 962  KEISVKDHNQLFVKREELSLDSLKQYKVYCPDELSKILVIKDKILEIGQKVGQTIIFVRT 1141
            K     D+NQLFVK+E+LSL+SLKQYKV  PDEL+KI V+KD+ILE+G+ +GQ IIFV T
Sbjct: 293  K-----DYNQLFVKKEDLSLESLKQYKVILPDELAKIGVVKDRILELGENIGQIIIFVNT 347

Query: 1142 RNSASMLHKTLVDYGYEVTTIQGALKQEDRDKIVKEFKEGLTQVLISTDLLARGFDQSQV 1321
            + SASMLH +LVD GYEVTTI GAL  EDRDKIVKEFK+GLTQVLISTD+LARGFDQ QV
Sbjct: 348  KRSASMLHTSLVDLGYEVTTIHGALNLEDRDKIVKEFKDGLTQVLISTDVLARGFDQQQV 407

Query: 1322 NLVVNYDLPLKYDTRGEPDYEVYLHRIGRAGRFGRKGAVFNLLFDDRDKMLMSKIENHFD 1501
            NLV+NYDLP+KY+ + EP YEVYLHRIGRAGRFGRKGAVFN +  D D M+M KIE++F+
Sbjct: 408  NLVINYDLPVKYENQSEPHYEVYLHRIGRAGRFGRKGAVFNFIMTDHDLMIMRKIESYFN 467

Query: 1502 HQVAEVASWQSDADFEDALKKAGLM 1576
              VAE+ SW S+  F+ ALK+AGL+
Sbjct: 468  SPVAEIPSWGSEEGFKVALKEAGLL 492


>ref|XP_002326399.1| predicted protein [Populus trichocarpa] gi|222833592|gb|EEE72069.1|
            predicted protein [Populus trichocarpa]
          Length = 492

 Score =  625 bits (1611), Expect = e-176
 Identities = 312/445 (70%), Positives = 374/445 (84%), Gaps = 1/445 (0%)
 Frame = +2

Query: 245  SLSVDSSKKANEFLDDPDASRIEAVTSGDTPYTSAKTFEDLNLSPDLLKGLYVEMKFQRP 424
            +L++D + K N+FLD+P+ SRI+AVT+GDTPYTSA TFEDLNLSP+LLKGLYVEMKFQ+P
Sbjct: 53   ALAIDENTKVNKFLDEPEDSRIQAVTTGDTPYTSASTFEDLNLSPELLKGLYVEMKFQKP 112

Query: 425  SKIQAISLPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKLAAPQALCICPTRELA 604
            SKIQAISLPMI+TPPYK+LIAQAHNGSGKTTCFVLGMLSRVDPK  +PQALCICPTREL+
Sbjct: 113  SKIQAISLPMIMTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPKQQSPQALCICPTRELS 172

Query: 605  IQNMEVLLRMGKFTGITSELAIPMDEGYLPISK-RAPVTKQVVIGTPGTINKWFTAKKLG 781
            IQNMEVL +MGK+TGI+SE A+P++      S+ R P++ QVVIGTPGTI +  + KKLG
Sbjct: 173  IQNMEVLQKMGKYTGISSECAVPIESRNNDRSRYRPPISAQVVIGTPGTIKRLMSQKKLG 232

Query: 782  MGSMNVLVFDEADHMLAESGFRQDSERIMKGIVKIKPDCQVLLFSATFNDAVKAFASKIV 961
            +  M VLVFDEADHMLA+ GF+ DS RIMK I +    CQVLLFSATF++ VK F SK+V
Sbjct: 233  VNDMKVLVFDEADHMLAKDGFQDDSLRIMKDIQRFNSHCQVLLFSATFDETVKNFVSKVV 292

Query: 962  KEISVKDHNQLFVKREELSLDSLKQYKVYCPDELSKILVIKDKILEIGQKVGQTIIFVRT 1141
            K     D+NQLFVK+E+LSL+SLKQYKV  PDEL+KI V+KD+ILE+G+ +GQ IIFV T
Sbjct: 293  K-----DYNQLFVKKEDLSLESLKQYKVILPDELAKIRVVKDRILELGENIGQIIIFVNT 347

Query: 1142 RNSASMLHKTLVDYGYEVTTIQGALKQEDRDKIVKEFKEGLTQVLISTDLLARGFDQSQV 1321
            + SASMLH +LV+ GYEVTTI GAL  EDRDKIVKEFK+GLTQVLISTD+LARGFDQ QV
Sbjct: 348  KRSASMLHTSLVELGYEVTTIHGALNLEDRDKIVKEFKDGLTQVLISTDVLARGFDQQQV 407

Query: 1322 NLVVNYDLPLKYDTRGEPDYEVYLHRIGRAGRFGRKGAVFNLLFDDRDKMLMSKIENHFD 1501
            NLV+NYDLP+KY+ + EP YEVYLHRIGRAGRFGRKGAVFN +  D D M+M KIE++F+
Sbjct: 408  NLVINYDLPVKYENQSEPHYEVYLHRIGRAGRFGRKGAVFNFIMTDHDLMIMRKIESYFN 467

Query: 1502 HQVAEVASWQSDADFEDALKKAGLM 1576
              VAE+ SW S+  F+ ALK+AGL+
Sbjct: 468  SPVAEIPSWGSEEGFKVALKEAGLL 492


>ref|XP_003552095.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Glycine max]
          Length = 488

 Score =  616 bits (1589), Expect = e-174
 Identities = 317/483 (65%), Positives = 377/483 (78%), Gaps = 8/483 (1%)
 Frame = +2

Query: 152  SVSTPDVKPPETKRWXXXXXXXXXXXXXXXXSLSV--------DSSKKANEFLDDPDASR 307
            +++T D   P TK W                + SV        D  K +++ LDDPD S 
Sbjct: 10   TIATADPPVPATKSWADEADEETNASTAEAETSSVNLEALTIDDKEKNSSKLLDDPDDSN 69

Query: 308  IEAVTSGDTPYTSAKTFEDLNLSPDLLKGLYVEMKFQRPSKIQAISLPMILTPPYKNLIA 487
            I+AVTSGDTPYTSA  FEDL+LSP+LLKGLYVEMKF++PSKIQAISLPMIL+PP ++LIA
Sbjct: 70   IQAVTSGDTPYTSAARFEDLSLSPELLKGLYVEMKFEKPSKIQAISLPMILSPPNRDLIA 129

Query: 488  QAHNGSGKTTCFVLGMLSRVDPKLAAPQALCICPTRELAIQNMEVLLRMGKFTGITSELA 667
            QAHNGSGKTTCFVLGMLSRVDPK+ APQALCICPTRELAIQN+EVL RMGK+TGI SE  
Sbjct: 130  QAHNGSGKTTCFVLGMLSRVDPKVQAPQALCICPTRELAIQNIEVLRRMGKYTGIASECL 189

Query: 668  IPMDEGYLPISKRAPVTKQVVIGTPGTINKWFTAKKLGMGSMNVLVFDEADHMLAESGFR 847
            +P+D   + +SKRAP+  QVVIGTPGT+ K+ + KKLG   + +LVFDEAD MLAE GFR
Sbjct: 190  VPLDRDAVHVSKRAPIMAQVVIGTPGTVKKFISFKKLGTTRLRILVFDEADQMLAEDGFR 249

Query: 848  QDSERIMKGIVKIKPDCQVLLFSATFNDAVKAFASKIVKEISVKDHNQLFVKREELSLDS 1027
             DS RIMK I K    CQVLLFSATFND VK F S+ V+     DHN+LFVK+EELSLD+
Sbjct: 250  DDSLRIMKDIEKENSKCQVLLFSATFNDTVKNFVSRTVR----MDHNKLFVKKEELSLDA 305

Query: 1028 LKQYKVYCPDELSKILVIKDKILEIGQKVGQTIIFVRTRNSASMLHKTLVDYGYEVTTIQ 1207
            +KQYKVYCPDEL+KI V+KD I EIG+ VGQTIIFVR++ +A + H+ LV  GYEVT+IQ
Sbjct: 306  VKQYKVYCPDELAKIDVVKDYIFEIGENVGQTIIFVRSKITARLTHEALVKLGYEVTSIQ 365

Query: 1208 GALKQEDRDKIVKEFKEGLTQVLISTDLLARGFDQSQVNLVVNYDLPLKYDTRGEPDYEV 1387
            G+L  E+RDK+VKEFK+GLTQVLISTD+LARGFDQ QVNLV+NYDLP KY  R EPDYEV
Sbjct: 366  GSLSNEERDKVVKEFKDGLTQVLISTDILARGFDQQQVNLVINYDLPKKYGVRDEPDYEV 425

Query: 1388 YLHRIGRAGRFGRKGAVFNLLFDDRDKMLMSKIENHFDHQVAEVASWQSDADFEDALKKA 1567
            YLHR+GRAGRFGRKGAVFNL+  + D+ LMSKIENHF  +V EV + QS  +++ ALK+A
Sbjct: 426  YLHRVGRAGRFGRKGAVFNLICGELDERLMSKIENHFGTRVTEVRA-QSVEEYKAALKEA 484

Query: 1568 GLM 1576
            GL+
Sbjct: 485  GLL 487