BLASTX nr result

ID: Bupleurum21_contig00003000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003000
         (1039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275920.1| PREDICTED: uncharacterized protein LOC100261...    77   2e-21
ref|XP_004170634.1| PREDICTED: mechanosensitive ion channel prot...    83   6e-21
ref|XP_004133856.1| PREDICTED: mechanosensitive ion channel prot...    83   6e-21
ref|XP_004141529.1| PREDICTED: probable nucleoredoxin 1-like [Cu...   107   6e-21
emb|CBI40429.3| unnamed protein product [Vitis vinifera]               72   4e-20

>ref|XP_002275920.1| PREDICTED: uncharacterized protein LOC100261915 [Vitis vinifera]
          Length = 599

 Score = 76.6 bits (187), Expect(2) = 2e-21
 Identities = 35/54 (64%), Positives = 44/54 (81%)
 Frame = -3

Query: 1037 PRVLRRFHKFSMQGPAQLLSGSSLWGPVPYEKSFWGALEDPLRYLVTFMAFSQM 876
            PR+LRRFHK++ QG A LL GS     VPYEKSFW ALEDP+RYL+TF++F+Q+
Sbjct: 277  PRLLRRFHKYATQGSAVLLLGSLPEEQVPYEKSFWSALEDPVRYLITFISFTQI 330



 Score = 52.8 bits (125), Expect(2) = 2e-21
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = -2

Query: 771 GNMVAPTTIASQYISQTWRGAVILSVVWFL 682
           G M+APTTIASQYI   WRGA+ILS VWFL
Sbjct: 331 GTMIAPTTIASQYIGPAWRGALILSFVWFL 360


>ref|XP_004170634.1| PREDICTED: mechanosensitive ion channel protein 1, mitochondrial-like
            [Cucumis sativus]
          Length = 521

 Score = 83.2 bits (204), Expect(2) = 6e-21
 Identities = 37/54 (68%), Positives = 45/54 (83%)
 Frame = -3

Query: 1037 PRVLRRFHKFSMQGPAQLLSGSSLWGPVPYEKSFWGALEDPLRYLVTFMAFSQM 876
            PR+L+RFHK+SM+ P  ++SGS     +PYEKSFWGALEDPLRYLVTF AFSQ+
Sbjct: 195  PRLLKRFHKYSMRSPVAIISGSLPSEEIPYEKSFWGALEDPLRYLVTFFAFSQI 248



 Score = 44.7 bits (104), Expect(2) = 6e-21
 Identities = 20/36 (55%), Positives = 27/36 (75%)
 Frame = -2

Query: 789 FIHSYRGNMVAPTTIASQYISQTWRGAVILSVVWFL 682
           F  S  G +VAPT +A +++SQ  RGAVILS+VWF+
Sbjct: 243 FAFSQIGVIVAPTAVAPEFVSQACRGAVILSLVWFI 278


>ref|XP_004133856.1| PREDICTED: mechanosensitive ion channel protein 1, mitochondrial-like
            [Cucumis sativus]
          Length = 521

 Score = 83.2 bits (204), Expect(2) = 6e-21
 Identities = 37/54 (68%), Positives = 45/54 (83%)
 Frame = -3

Query: 1037 PRVLRRFHKFSMQGPAQLLSGSSLWGPVPYEKSFWGALEDPLRYLVTFMAFSQM 876
            PR+L+RFHK+SM+ P  ++SGS     +PYEKSFWGALEDPLRYLVTF AFSQ+
Sbjct: 195  PRLLKRFHKYSMRSPVAIISGSLPSEEIPYEKSFWGALEDPLRYLVTFFAFSQI 248



 Score = 44.7 bits (104), Expect(2) = 6e-21
 Identities = 20/36 (55%), Positives = 27/36 (75%)
 Frame = -2

Query: 789 FIHSYRGNMVAPTTIASQYISQTWRGAVILSVVWFL 682
           F  S  G +VAPT +A +++SQ  RGAVILS+VWF+
Sbjct: 243 FAFSQIGVIVAPTAVAPEFVSQACRGAVILSLVWFI 278


>ref|XP_004141529.1| PREDICTED: probable nucleoredoxin 1-like [Cucumis sativus]
           gi|449481478|ref|XP_004156195.1| PREDICTED: probable
           nucleoredoxin 1-like [Cucumis sativus]
          Length = 562

 Score =  107 bits (266), Expect = 6e-21
 Identities = 67/169 (39%), Positives = 95/169 (56%), Gaps = 2/169 (1%)
 Frame = +1

Query: 1   YVISNNGDKVPIHTLEEKVVALYFYEDGFTD--EFTENLKTTYEELAKNEENFEVVLIYL 174
           YVISN+G+++P+  LE KV+ LYF   G+ D  EFT  L  TY++L +  +NFE+VLI L
Sbjct: 180 YVISNDGNQIPVSELEGKVIGLYFSVYGYADCDEFTPILVDTYKKLKEKGQNFEIVLISL 239

Query: 175 YDTSRTYDHTNEGSFWEKFKTMHWLALPFRDPNCRKLMRLFSYPTSEDSVYEATTLVIVG 354
            D ++         F E  KT+ WLALPF+D  CRKL R F   T         TLVI+G
Sbjct: 240 DDANK--------DFSEALKTVPWLALPFQDEKCRKLTRYFDLST-------IPTLVIIG 284

Query: 355 PCGKFIELWGAHMLSSHNNIIQAFPFIREKFVQLYTEKVKELKFEMLWS 501
             GK +    A ++  H   + A+PF +EK  +L   +  +L+ + L S
Sbjct: 285 QDGKTLISNAAELVEEHG--VDAYPFTQEKLDELAEIEKSKLESQTLES 331



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 52/159 (32%), Positives = 71/159 (44%), Gaps = 3/159 (1%)
 Frame = +1

Query: 1   YVISNNGDKVPIHTLEEKVVALYFYEDGFTD--EFTENLKTTYEELAKNEENFEVVLIYL 174
           ++I NNGD+V I +L  K V LYF          FT      YEE+A   E FEV+ I  
Sbjct: 20  FLIRNNGDQVKISSLIGKNVGLYFSASWCPPCRRFTPVFAGVYEEVAPKGE-FEVIFI-- 76

Query: 175 YDTSRTYDHTNEGSFWEKFKTMHWLALPFRDPN-CRKLMRLFSYPTSEDSVYEATTLVIV 351
                     +E SF + F  M WL+ PF D    ++L  LF        V     LV++
Sbjct: 77  ------SSDRDEDSFKDYFSKMPWLSFPFSDSEIVKRLKELF-------EVRGIPRLVVL 123

Query: 352 GPCGKFIELWGAHMLSSHNNIIQAFPFIREKFVQLYTEK 468
            P GK     G  +++ H   I A+PF  E+   L  E+
Sbjct: 124 DPSGKVSTDQGVRLVTEHG--ISAYPFTAEQIQHLKEEE 160



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 45/163 (27%), Positives = 68/163 (41%), Gaps = 2/163 (1%)
 Frame = +1

Query: 1   YVISNNGDKVPIHTLEEKVVALYFYEDGFTD--EFTENLKTTYEELAKNEENFEVVLIYL 174
           +VI  +G KVP+  L  K + LYF          F   L  +Y E+ +  + FEV+ I  
Sbjct: 340 FVIGKDGAKVPVSELVGKKILLYFSAHWCPPCRSFLPKLIESYNEIKQKYKEFEVIFIS- 398

Query: 175 YDTSRTYDHTNEGSFWEKFKTMHWLALPFRDPNCRKLMRLFSYPTSEDSVYEATTLVIVG 354
                     ++ SF E F  M WLALPF D     L R F        +     +V + 
Sbjct: 399 -------SDRDDNSFQEFFSGMPWLALPFGDERKNFLNRRF-------KIQGIPAVVAIN 444

Query: 355 PCGKFIELWGAHMLSSHNNIIQAFPFIREKFVQLYTEKVKELK 483
             G+ +      +++ H     A+PF  E+  QL  +  +E K
Sbjct: 445 ESGRTVSTEARKLITEHG--ANAYPFTEERLEQLEKQLEEESK 485


>emb|CBI40429.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score = 72.4 bits (176), Expect(2) = 4e-20
 Identities = 33/53 (62%), Positives = 43/53 (81%)
 Frame = -3

Query: 1034 RVLRRFHKFSMQGPAQLLSGSSLWGPVPYEKSFWGALEDPLRYLVTFMAFSQM 876
            ++LRRFHK++ QG A LL GS     VPYEKSFW ALEDP+RYL+TF++F+Q+
Sbjct: 51   QLLRRFHKYATQGSAVLLLGSLPEEQVPYEKSFWSALEDPVRYLITFISFTQI 103



 Score = 52.8 bits (125), Expect(2) = 4e-20
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = -2

Query: 771 GNMVAPTTIASQYISQTWRGAVILSVVWFL 682
           G M+APTTIASQYI   WRGA+ILS VWFL
Sbjct: 104 GTMIAPTTIASQYIGPAWRGALILSFVWFL 133


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