BLASTX nr result

ID: Bupleurum21_contig00002996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002996
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633295.1| PREDICTED: uncharacterized protein LOC100853...    57   2e-06
ref|XP_002648999.1| Hypothetical protein CBG21336 [Caenorhabditi...    56   3e-06

>ref|XP_003633295.1| PREDICTED: uncharacterized protein LOC100853570 [Vitis vinifera]
          Length = 421

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/84 (35%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
 Frame = -2

Query: 251 W*HWHTWSAYYWWHYRRVWLR-----WAHYRRVWCHWHTWSAYY----WWHYRRVWLRWA 99
           W  W TW    WW   R W R     W   RR W  W TW  +     WW  R  W RW 
Sbjct: 114 WPRWRTW----WWPRWRTWWRTWWWTWWWPRR-WRWWRTWWWWRRKGRWWRRRPAW-RWR 167

Query: 98  HYRRVWLRWAQYRGVWVRWADYWR 27
            +R  W  W+  R  W  W   WR
Sbjct: 168 RWRTWWWWWSWRRAWWWSWRRAWR 191



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
 Frame = -2

Query: 257 RVW*HWHTWSAYY----WWHYRRVWLRWAHYRRVWCHWHTWSAYYWWHYRRVWLRWAHYR 90
           R W  W TW  +     WW  R  W RW  +R  W  W +W   +WW +RR W RW    
Sbjct: 140 RRWRWWRTWWWWRRKGRWWRRRPAW-RWRRWRT-WWWWWSWRRAWWWSWRRAW-RW---- 192

Query: 89  RVWLRW---AQYRGVWVRWADYWRHGK 18
           R W  W    + R    RW   WR G+
Sbjct: 193 RWWWSWRWRRKRRWRKGRWWWPWRRGR 219


>ref|XP_002648999.1| Hypothetical protein CBG21336 [Caenorhabditis briggsae]
          Length = 238

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = -2

Query: 218 WWHYRRVWLRWAHYRRVWCHWH-TWSAY--YWWHYRRVWLRWAHYRRVWLRWAQYRGVWV 48
           WW + R W RW    R W  W+ +W  +   WW + R W RW    R W RW Q    W 
Sbjct: 90  WWRWNRSWWRW---NRSWWRWNRSWWRWNRSWWRWNRSWWRW---NRSWWRWNQ---SWW 140

Query: 47  RW-ADYWRHGKHIW 9
           RW   +WR  +  W
Sbjct: 141 RWNRSWWRWNRSWW 154


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