BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002989
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302374.1| predicted protein [Populus trichocarpa] gi|1...    86   7e-15
sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, c...    83   5e-14
ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabi...    82   6e-14
ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arab...    82   6e-14
ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast prec...    77   3e-12

>ref|XP_002302374.1| predicted protein [Populus trichocarpa] gi|118486925|gb|ABK95296.1|
           unknown [Populus trichocarpa]
           gi|222844100|gb|EEE81647.1| predicted protein [Populus
           trichocarpa]
          Length = 123

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
 Frame = +1

Query: 37  MSVSAMFGCRLVIAPSTFTSP---PPFRRVSTAPLPQL--SGGLVIESSSRPQKKATAHH 201
           MSVS++FG   ++AP   T+P   P      T P+      GG+ IE SSRPQKKATAHH
Sbjct: 1   MSVSSIFGSPFLLAPKPSTTPSFKPVNGEFKTVPIGTGFGHGGMSIECSSRPQKKATAHH 60

Query: 202 RKTRPKKTQPWDVKRGAAVYXXXXXXXXXWTL 297
           RKTRP+K+QPWD+KR   VY         WTL
Sbjct: 61  RKTRPRKSQPWDIKRKPTVYAPLPPLPPDWTL 92


>sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, chloroplastic; AltName:
           Full=CL25; AltName: Full=Plastid-specific 50S ribosomal
           protein 6; Short=PSRP-6; Flags: Precursor
           gi|7578927|gb|AAF64189.1|AF245292_1 plastid-specific
           ribosomal protein 6 precursor [Spinacia oleracea]
          Length = 116

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 48/91 (52%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
 Frame = +1

Query: 37  MSVSAMFGCRLVIAPSTF-TSPPPFRRVSTAPLP--QLSGGLV-IESSSRPQKKATAHHR 204
           MSVSA+FG R+V  PS   TS    R V   P       GG++ IE SSRPQKK TAHH 
Sbjct: 1   MSVSAIFGARVVTIPSVLRTSSVDGRTVKLQPSTGGSCGGGVITIECSSRPQKKGTAHHM 60

Query: 205 KTRPKKTQPWDVKRGAAVYXXXXXXXXXWTL 297
           KTRPKKT  WD+KRG AVY         WT+
Sbjct: 61  KTRPKKTARWDIKRGPAVYPPLPPLPAEWTI 91


>ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabidopsis thaliana]
           gi|75171293|sp|Q9FKP0.1|PSRP6_ARATH RecName: Full=50S
           ribosomal protein 6, chloroplastic; AltName: Full=CL25;
           AltName: Full=Plastid-specific 50S ribosomal protein 6;
           Short=PSRP-6; Flags: Precursor
           gi|10177888|dbj|BAB11220.1| unnamed protein product
           [Arabidopsis thaliana] gi|14517428|gb|AAK62604.1|
           AT5g17870/MPI7_10 [Arabidopsis thaliana]
           gi|20147339|gb|AAM10383.1| AT5g17870/MPI7_10
           [Arabidopsis thaliana] gi|21554906|gb|AAM63726.1|
           plastid-specific ribosomal protein 6 precursor
           (Psrp-6)-like [Arabidopsis thaliana]
           gi|332005097|gb|AED92480.1| plastid-specific 50S
           ribosomal protein 6 [Arabidopsis thaliana]
          Length = 106

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 45/87 (51%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +1

Query: 37  MSVSAMFGCRLVIAPSTFTSPPPFRRVSTAPLPQLSG-GLVIESSSRPQKKATAHHRKTR 213
           MSVSA+FG  +V    T  + P  R+     L    G G+VIE SSRPQKK+TAHHRKTR
Sbjct: 1   MSVSAIFGTGIV----TVAASPVLRQFQVPKLGNGGGLGMVIECSSRPQKKSTAHHRKTR 56

Query: 214 PKKTQPWDVKRGAAVYXXXXXXXXXWT 294
           PKKTQPWD+KR   VY         W+
Sbjct: 57  PKKTQPWDIKRKPTVYAPLPPLPAEWS 83


>ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arabidopsis lyrata subsp.
           lyrata] gi|297317621|gb|EFH48043.1| hypothetical protein
           ARALYDRAFT_488653 [Arabidopsis lyrata subsp. lyrata]
          Length = 108

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 45/87 (51%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +1

Query: 37  MSVSAMFGCRLVIAPSTFTSPPPFRRVSTAPLPQLSG-GLVIESSSRPQKKATAHHRKTR 213
           MSVSA+FG  +V    T  + P  R+     L    G G+VIE SSRPQKK+TAHHRK+R
Sbjct: 1   MSVSAIFGTGIV----TVAASPVLRQFQVPTLGNGGGLGMVIECSSRPQKKSTAHHRKSR 56

Query: 214 PKKTQPWDVKRGAAVYXXXXXXXXXWT 294
           PKKTQPWD+KR   VY         WT
Sbjct: 57  PKKTQPWDIKRKPTVYAPLPPLPAEWT 83


>ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast precursor, putative
           [Ricinus communis] gi|223550719|gb|EEF52205.1| 50S
           ribosomal protein CL25, chloroplast precursor, putative
           [Ricinus communis]
          Length = 126

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 43/92 (46%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
 Frame = +1

Query: 37  MSVSAMFGCRLVIAPSTFTSPPPFRRVSTAPLPQL-----SGGLVIESSSRPQKKATAHH 201
           MS+S++FG  +V+             V +AP         SGGLVIE SSRP+KKATAHH
Sbjct: 1   MSISSIFGSPVVLLSKASLKQLNVE-VKSAPKTATGNGWYSGGLVIECSSRPKKKATAHH 59

Query: 202 RKTRPKKTQPWDVKRGAAVYXXXXXXXXXWTL 297
            KTRPKK+QPWD++R   VY         WTL
Sbjct: 60  MKTRPKKSQPWDIRRKPTVYPPLPPLPPDWTL 91