BLASTX nr result

ID: Bupleurum21_contig00002981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002981
         (1740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330572.1| predicted protein [Populus trichocarpa] gi|2...   726   0.0  
ref|XP_002264198.1| PREDICTED: uncharacterized WD repeat-contain...   712   0.0  
ref|XP_002299079.1| predicted protein [Populus trichocarpa] gi|2...   709   0.0  
ref|XP_002525241.1| WD-repeat protein, putative [Ricinus communi...   707   0.0  
ref|XP_003598295.1| WD-repeat protein-like protein [Medicago tru...   701   0.0  

>ref|XP_002330572.1| predicted protein [Populus trichocarpa] gi|222872130|gb|EEF09261.1|
            predicted protein [Populus trichocarpa]
          Length = 445

 Score =  726 bits (1875), Expect = 0.0
 Identities = 350/446 (78%), Positives = 389/446 (87%)
 Frame = +3

Query: 6    MSHYQGXXXXXXXXXXXXXXXXXXXXXXFQGRXXXXXXXXXXEYDAMNNKMADTSASQAR 185
            MSHYQG                      F+ R          EYD +NNK+ADTSA+ AR
Sbjct: 1    MSHYQGDDAEYMEDEYEMEDVDDDMDEEFRAREMGSDSDID-EYDYLNNKVADTSAADAR 59

Query: 186  RGKDIQGIPWERLSITREKYRQTRLEQYKNYENIPHSGQGAEKACKITKKGGLYYEFRRN 365
             GKDIQGIPWERLSITR+KYRQTRLEQYKNYENIPHSG+ ++K CKIT+KGG+YYEFRRN
Sbjct: 60   NGKDIQGIPWERLSITRDKYRQTRLEQYKNYENIPHSGEDSKKDCKITEKGGMYYEFRRN 119

Query: 366  SRSVRSTIHHFQLRNLVWATSKHDVYLMSHFSVIHWSSLACNKSEVLNVSGHVAPCEKHP 545
            SRSV+STI HFQLRNLVWAT+KHDVYLMSHFSVIHWSSL C+K++VL+VSGHVAP EKHP
Sbjct: 120  SRSVKSTILHFQLRNLVWATTKHDVYLMSHFSVIHWSSLTCSKADVLDVSGHVAPTEKHP 179

Query: 546  GSLLEGFTQTQVSTLAVKDNLLVAGGFLGELICKNLDRPGVSFCSRTTYDDNAITNAVDI 725
            GSLLEGFTQTQVSTLAVKDNLLVAGGF GELICK+LDRPGVSFCSRTTYDDNAITNAV+I
Sbjct: 180  GSLLEGFTQTQVSTLAVKDNLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEI 239

Query: 726  YTTASGAVHFTASNNDSGVRDFDMEKFQLSSHFRFPWPVNHTSLSPDGKILIIVGDNPDC 905
            Y + SGAVHFTASNND GVRDFDMEK+QLS HFRFPWPVNHTSLSPDGK+L IVGD+PD 
Sbjct: 240  YDSPSGAVHFTASNNDHGVRDFDMEKYQLSKHFRFPWPVNHTSLSPDGKLLTIVGDSPDG 299

Query: 906  MLVDSRSGKTIAPLCGHLDFSFASAWHPDGLTFATGNQDKTCRIWDMRNLSTSVAALKGN 1085
            MLVDS SGKT+  L GHLDFSFASAWHPDG+TFATGNQDKTCRIWD+RNLS S+A LKGN
Sbjct: 300  MLVDSSSGKTVTSLSGHLDFSFASAWHPDGVTFATGNQDKTCRIWDVRNLSKSLAVLKGN 359

Query: 1086 LGAIRSVRYSSDGRFMAMAEPADFVHVFDVKSGYEVEQEIDFFGEISGMSYSPDTESLFI 1265
            LGAIRS+RY+SDG++MAMAEPADFVHV+DVK+GYE EQEIDFFGEISG+S+SPDTE+L+I
Sbjct: 360  LGAIRSIRYTSDGQYMAMAEPADFVHVYDVKNGYEKEQEIDFFGEISGVSFSPDTEALYI 419

Query: 1266 GVWDRTYGSLLEFGRRRNYSYLDALI 1343
            GVWDRTYGSLLE+GR RNYSYLD+ +
Sbjct: 420  GVWDRTYGSLLEYGRCRNYSYLDSFV 445


>ref|XP_002264198.1| PREDICTED: uncharacterized WD repeat-containing protein C2A9.03
            [Vitis vinifera] gi|296090035|emb|CBI39854.3| unnamed
            protein product [Vitis vinifera]
          Length = 442

 Score =  712 bits (1837), Expect = 0.0
 Identities = 335/403 (83%), Positives = 372/403 (92%)
 Frame = +3

Query: 135  YDAMNNKMADTSASQARRGKDIQGIPWERLSITREKYRQTRLEQYKNYENIPHSGQGAEK 314
            YD +N+K ADT ++QARRGKDIQGIPWERL+ITREKYRQTR+EQYKNYENIP SG G+ K
Sbjct: 40   YDYLNSKTADTCSAQARRGKDIQGIPWERLTITREKYRQTRVEQYKNYENIPRSGDGSAK 99

Query: 315  ACKITKKGGLYYEFRRNSRSVRSTIHHFQLRNLVWATSKHDVYLMSHFSVIHWSSLACNK 494
             CK+TKKGGL+YEF+ N+RSV+STI HFQLRNLVWATSKHDVYLMSHFSVIHWSSL CN 
Sbjct: 100  ECKVTKKGGLFYEFKHNARSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTCNM 159

Query: 495  SEVLNVSGHVAPCEKHPGSLLEGFTQTQVSTLAVKDNLLVAGGFLGELICKNLDRPGVSF 674
            SEVLNVSGHVAPCEKHPGSLLEGFTQTQVSTLAVKD LLVAGGF GELICK LDRPGVSF
Sbjct: 160  SEVLNVSGHVAPCEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKYLDRPGVSF 219

Query: 675  CSRTTYDDNAITNAVDIYTTASGAVHFTASNNDSGVRDFDMEKFQLSSHFRFPWPVNHTS 854
            CSR TYDDNAITNA++IY ++SGAVHF AS+ND GVRDFDME FQLS HF FPWPVNHTS
Sbjct: 220  CSRITYDDNAITNAIEIYASSSGAVHFIASSNDCGVRDFDMEDFQLSKHFHFPWPVNHTS 279

Query: 855  LSPDGKILIIVGDNPDCMLVDSRSGKTIAPLCGHLDFSFASAWHPDGLTFATGNQDKTCR 1034
            LSPDGK+LIIVGDNP+ MLVDS++GKT+ PLCGHLD+SFASAW+PDG+TFATGNQDKTCR
Sbjct: 280  LSPDGKLLIIVGDNPNGMLVDSKTGKTVMPLCGHLDYSFASAWNPDGVTFATGNQDKTCR 339

Query: 1035 IWDMRNLSTSVAALKGNLGAIRSVRYSSDGRFMAMAEPADFVHVFDVKSGYEVEQEIDFF 1214
            IWD R LS SVA LKGNLGAIRS+RY+SDGRFMAMAEPADFVHV+DVK+GYE +QEIDFF
Sbjct: 340  IWDARYLSKSVAVLKGNLGAIRSIRYTSDGRFMAMAEPADFVHVYDVKNGYEKKQEIDFF 399

Query: 1215 GEISGMSYSPDTESLFIGVWDRTYGSLLEFGRRRNYSYLDALI 1343
            GE+SG+ +SPDTESLFIGVWDRTYGSL+E+ R RNY+YLD+LI
Sbjct: 400  GEVSGICFSPDTESLFIGVWDRTYGSLMEYNRCRNYAYLDSLI 442


>ref|XP_002299079.1| predicted protein [Populus trichocarpa] gi|222846337|gb|EEE83884.1|
            predicted protein [Populus trichocarpa]
          Length = 445

 Score =  709 bits (1831), Expect = 0.0
 Identities = 346/446 (77%), Positives = 380/446 (85%)
 Frame = +3

Query: 6    MSHYQGXXXXXXXXXXXXXXXXXXXXXXFQGRXXXXXXXXXXEYDAMNNKMADTSASQAR 185
            MSHYQG                      F+ R          EYD  NNK+AD SA+ AR
Sbjct: 1    MSHYQGDDAEYMADEYEMEDVDDDMDEEFRAREMGSDSDVD-EYDYPNNKVADMSAADAR 59

Query: 186  RGKDIQGIPWERLSITREKYRQTRLEQYKNYENIPHSGQGAEKACKITKKGGLYYEFRRN 365
             GKDIQGIPWERLS+TREKYRQTRLEQYKNYENIPHSG+ + K CKITKKGGLYYEFRRN
Sbjct: 60   NGKDIQGIPWERLSVTREKYRQTRLEQYKNYENIPHSGEVSRKDCKITKKGGLYYEFRRN 119

Query: 366  SRSVRSTIHHFQLRNLVWATSKHDVYLMSHFSVIHWSSLACNKSEVLNVSGHVAPCEKHP 545
            SRSV+STI HFQLRNLVWAT+KHDVYLMS+FSV HWSSL C+KS+VL+VSGHVAP EKHP
Sbjct: 120  SRSVKSTILHFQLRNLVWATTKHDVYLMSNFSVTHWSSLTCSKSDVLDVSGHVAPTEKHP 179

Query: 546  GSLLEGFTQTQVSTLAVKDNLLVAGGFLGELICKNLDRPGVSFCSRTTYDDNAITNAVDI 725
            GSLLEGFTQTQVSTLAVK NLLVAGGF GELICK+LDRPGVSFCSRTTYDDNAITNAV+I
Sbjct: 180  GSLLEGFTQTQVSTLAVKGNLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEI 239

Query: 726  YTTASGAVHFTASNNDSGVRDFDMEKFQLSSHFRFPWPVNHTSLSPDGKILIIVGDNPDC 905
            Y + SGAVHFTASNND GVRDFDMEK+QLS HF FPWPVNHTSLSPDGK+L IVGDNP  
Sbjct: 240  YDSPSGAVHFTASNNDCGVRDFDMEKYQLSKHFCFPWPVNHTSLSPDGKLLTIVGDNPAG 299

Query: 906  MLVDSRSGKTIAPLCGHLDFSFASAWHPDGLTFATGNQDKTCRIWDMRNLSTSVAALKGN 1085
            MLVDS +GKT+A L GH DFSFASAWHPDG+TFATGNQDKTCRIWD RNLS SVA LKGN
Sbjct: 300  MLVDSSTGKTVASLSGHWDFSFASAWHPDGVTFATGNQDKTCRIWDARNLSESVAVLKGN 359

Query: 1086 LGAIRSVRYSSDGRFMAMAEPADFVHVFDVKSGYEVEQEIDFFGEISGMSYSPDTESLFI 1265
            LGAIRS+R++SDG++MAMAEPADFVHV+D K+GYE EQEIDFFGEISG+S+SPDTE+L+I
Sbjct: 360  LGAIRSIRFTSDGQYMAMAEPADFVHVYDAKNGYEKEQEIDFFGEISGVSFSPDTEALYI 419

Query: 1266 GVWDRTYGSLLEFGRRRNYSYLDALI 1343
            GVWDRTYGSLLE+GR RNYSYLD+ +
Sbjct: 420  GVWDRTYGSLLEYGRCRNYSYLDSFV 445


>ref|XP_002525241.1| WD-repeat protein, putative [Ricinus communis]
            gi|223535538|gb|EEF37207.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 438

 Score =  707 bits (1825), Expect = 0.0
 Identities = 334/404 (82%), Positives = 371/404 (91%)
 Frame = +3

Query: 132  EYDAMNNKMADTSASQARRGKDIQGIPWERLSITREKYRQTRLEQYKNYENIPHSGQGAE 311
            EYD ++NK+ DTSA+ ARRGKDIQGIPWERLSI+REKYRQTRLEQYKNYENIP SG+G+E
Sbjct: 35   EYDHLDNKITDTSAADARRGKDIQGIPWERLSISREKYRQTRLEQYKNYENIPQSGEGSE 94

Query: 312  KACKITKKGGLYYEFRRNSRSVRSTIHHFQLRNLVWATSKHDVYLMSHFSVIHWSSLACN 491
            K CK TKKGG YYEF RN+RSV STI HFQLRNLVW+T+KHDVYLMSHFS+IHWSSL+C 
Sbjct: 95   KECKPTKKGGAYYEFWRNTRSVTSTILHFQLRNLVWSTTKHDVYLMSHFSIIHWSSLSCK 154

Query: 492  KSEVLNVSGHVAPCEKHPGSLLEGFTQTQVSTLAVKDNLLVAGGFLGELICKNLDRPGVS 671
            K+EVLNVSGHVAPCEKHPGSLLEGFTQTQVSTLAV+D LL+AGGF GE+ICK+LDR GVS
Sbjct: 155  KTEVLNVSGHVAPCEKHPGSLLEGFTQTQVSTLAVRDKLLIAGGFQGEIICKHLDRSGVS 214

Query: 672  FCSRTTYDDNAITNAVDIYTTASGAVHFTASNNDSGVRDFDMEKFQLSSHFRFPWPVNHT 851
            FC RTTYDDNAITNAV+IY  ASGAVHF ASNND GVRDFDMEKFQLS HF FPWPVNHT
Sbjct: 215  FCYRTTYDDNAITNAVEIYDYASGAVHFMASNNDCGVRDFDMEKFQLSKHFCFPWPVNHT 274

Query: 852  SLSPDGKILIIVGDNPDCMLVDSRSGKTIAPLCGHLDFSFASAWHPDGLTFATGNQDKTC 1031
            SLSPDGK+L IVGDNP+ +LVDS++GKTI PLCGHLDFSFASAWHPDG  FATGNQDKTC
Sbjct: 275  SLSPDGKLLTIVGDNPEGILVDSQTGKTITPLCGHLDFSFASAWHPDGRIFATGNQDKTC 334

Query: 1032 RIWDMRNLSTSVAALKGNLGAIRSVRYSSDGRFMAMAEPADFVHVFDVKSGYEVEQEIDF 1211
            RIWD RNLS SVA LKGNLGAIRS+R++SDGRFMAMAEPADFVHV+DVK+G+E EQEIDF
Sbjct: 335  RIWDARNLSKSVAVLKGNLGAIRSIRFTSDGRFMAMAEPADFVHVYDVKNGFEKEQEIDF 394

Query: 1212 FGEISGMSYSPDTESLFIGVWDRTYGSLLEFGRRRNYSYLDALI 1343
            FGEISG+S+SPDTESLFIGVWDRTYGSLL++ R RNY++LD+ +
Sbjct: 395  FGEISGVSFSPDTESLFIGVWDRTYGSLLQYNRSRNYTFLDSFM 438


>ref|XP_003598295.1| WD-repeat protein-like protein [Medicago truncatula]
            gi|355487343|gb|AES68546.1| WD-repeat protein-like
            protein [Medicago truncatula]
          Length = 489

 Score =  701 bits (1809), Expect = 0.0
 Identities = 334/404 (82%), Positives = 370/404 (91%)
 Frame = +3

Query: 132  EYDAMNNKMADTSASQARRGKDIQGIPWERLSITREKYRQTRLEQYKNYENIPHSGQGAE 311
            EYD  ++K  DT+A+QARRG+DIQGIPW+ LSITRE+YRQTRL+QYKNYENI HSG  + 
Sbjct: 86   EYDYSSSKAVDTTAAQARRGQDIQGIPWDSLSITRERYRQTRLDQYKNYENILHSGDRSG 145

Query: 312  KACKITKKGGLYYEFRRNSRSVRSTIHHFQLRNLVWATSKHDVYLMSHFSVIHWSSLACN 491
            K CK T KG  +YEFRRNSRS +STI HFQLRNLVWATSKHDVYLMS FSV HWSSL C 
Sbjct: 146  KDCKSTDKGYSFYEFRRNSRSAKSTILHFQLRNLVWATSKHDVYLMSQFSVTHWSSLTCT 205

Query: 492  KSEVLNVSGHVAPCEKHPGSLLEGFTQTQVSTLAVKDNLLVAGGFLGELICKNLDRPGVS 671
             SEVLNVSGHVAP EKHPGSLLEGFT TQVSTLAVKDNLLVAGGF GELICK+LDRPGVS
Sbjct: 206  SSEVLNVSGHVAPSEKHPGSLLEGFTHTQVSTLAVKDNLLVAGGFQGELICKHLDRPGVS 265

Query: 672  FCSRTTYDDNAITNAVDIYTTASGAVHFTASNNDSGVRDFDMEKFQLSSHFRFPWPVNHT 851
            FCSRTTYDDNAITNA++IY + SGAVHFTASNND G+R+FDMEKFQLS HFRFPWPVNHT
Sbjct: 266  FCSRTTYDDNAITNAIEIYDSPSGAVHFTASNNDCGIRNFDMEKFQLSKHFRFPWPVNHT 325

Query: 852  SLSPDGKILIIVGDNPDCMLVDSRSGKTIAPLCGHLDFSFASAWHPDGLTFATGNQDKTC 1031
            SLSPDGK+L+IVGDNP+ MLVDS++GKTIAPL GHLDFSFAS+W+PDG+TFATGNQDKTC
Sbjct: 326  SLSPDGKLLLIVGDNPESMLVDSQNGKTIAPLSGHLDFSFASSWNPDGVTFATGNQDKTC 385

Query: 1032 RIWDMRNLSTSVAALKGNLGAIRSVRYSSDGRFMAMAEPADFVHVFDVKSGYEVEQEIDF 1211
            RIWDMRNLS SVA LKGNLGAIRS+R+SSDG++MA+AEPADFVHV+DVKSGYE EQEIDF
Sbjct: 386  RIWDMRNLSKSVAVLKGNLGAIRSIRHSSDGKYMAIAEPADFVHVYDVKSGYEKEQEIDF 445

Query: 1212 FGEISGMSYSPDTESLFIGVWDRTYGSLLEFGRRRNYSYLDALI 1343
            FGEISG+S+SPDTESLFIGVWDRTYGSLLE+GRR NYSYLD++I
Sbjct: 446  FGEISGISFSPDTESLFIGVWDRTYGSLLEYGRRHNYSYLDSMI 489


Top