BLASTX nr result

ID: Bupleurum21_contig00002960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002960
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284943.1| PREDICTED: uncharacterized protein LOC100249...   304   2e-80
emb|CAN69845.1| hypothetical protein VITISV_038348 [Vitis vinifera]   302   4e-80
ref|XP_002512336.1| conserved hypothetical protein [Ricinus comm...   295   9e-78
ref|XP_002319030.1| predicted protein [Populus trichocarpa] gi|2...   289   4e-76
ref|XP_004156434.1| PREDICTED: uncharacterized protein LOC101230...   280   2e-73

>ref|XP_002284943.1| PREDICTED: uncharacterized protein LOC100249532 isoform 1 [Vitis
           vinifera] gi|359487717|ref|XP_003633636.1| PREDICTED:
           uncharacterized protein LOC100249532 isoform 2 [Vitis
           vinifera]
          Length = 242

 Score =  304 bits (778), Expect = 2e-80
 Identities = 151/217 (69%), Positives = 179/217 (82%)
 Frame = +2

Query: 98  CLSRRNLFLTSVSSISFLGLSLCPSLHIPISYAAVASTPPSKSFLAGIANTKSWFQFFGD 277
           C S +  F+ + +S+    LS     H P++ A   ++P SKS L+ IANTK+WFQFFGD
Sbjct: 30  CNSSKRDFILNTASLCAFSLSA----HYPVAIAFADTSPSSKSILSAIANTKTWFQFFGD 85

Query: 278 GFSIRVPPDFKDFTEPEDYSAGLSLYGDKAKPKVFAARFASSDGSEVVSVVIRTSNSLKI 457
           GFSIRVPP+F+D  EPED++AGLSLYGDKAKP+ FAARFASSDGSEV+SVVIR +N LKI
Sbjct: 86  GFSIRVPPEFEDIMEPEDFNAGLSLYGDKAKPRTFAARFASSDGSEVLSVVIRPTNQLKI 145

Query: 458 TFLEAKDITDIGSLKEAAKLFVPGGSTLYSARTIKIKEDEGFRNYYYYEFHREGEHFAVV 637
           TFLEAKDITD+GSLKEAAK+FVP  +TLYSARTIKIKED+GFR YY+YEF R+ +H AVV
Sbjct: 146 TFLEAKDITDLGSLKEAAKIFVPAAATLYSARTIKIKEDDGFRTYYFYEFGRDEQHLAVV 205

Query: 638 TAVNRGKVYIAGAAAPQRKWEDDGVKLRSAAVSLTLL 748
            AVN GK +IAGAAAPQ KW+DDGVKLRSAA+SLTLL
Sbjct: 206 AAVNGGKAFIAGAAAPQFKWDDDGVKLRSAAISLTLL 242


>emb|CAN69845.1| hypothetical protein VITISV_038348 [Vitis vinifera]
          Length = 242

 Score =  302 bits (774), Expect = 4e-80
 Identities = 151/217 (69%), Positives = 177/217 (81%)
 Frame = +2

Query: 98  CLSRRNLFLTSVSSISFLGLSLCPSLHIPISYAAVASTPPSKSFLAGIANTKSWFQFFGD 277
           C S +  F+ + +S+    LS     H P + A   ++P SKS L+ IANTK+WFQFFGD
Sbjct: 30  CNSSKRDFILNTASLCAFSLSA----HYPFAIAFADTSPSSKSILSAIANTKTWFQFFGD 85

Query: 278 GFSIRVPPDFKDFTEPEDYSAGLSLYGDKAKPKVFAARFASSDGSEVVSVVIRTSNSLKI 457
           GFSIRVPP+F+D  EPED+ AGLSLYGDKAKP+ FAARFASSDGSEV+SVVIR +N LKI
Sbjct: 86  GFSIRVPPEFEDIMEPEDFDAGLSLYGDKAKPRTFAARFASSDGSEVLSVVIRPTNQLKI 145

Query: 458 TFLEAKDITDIGSLKEAAKLFVPGGSTLYSARTIKIKEDEGFRNYYYYEFHREGEHFAVV 637
           TFLEAKDITD+GSLKEAAK+FVP  +TLYSARTIKIKED+GFR YY+YEF R+ +H AVV
Sbjct: 146 TFLEAKDITDLGSLKEAAKIFVPAAATLYSARTIKIKEDDGFRTYYFYEFGRDEQHLAVV 205

Query: 638 TAVNRGKVYIAGAAAPQRKWEDDGVKLRSAAVSLTLL 748
            AVN GK +IAGAAAPQ KW+DDGVKLRSAA+SLTLL
Sbjct: 206 AAVNGGKAFIAGAAAPQFKWDDDGVKLRSAAISLTLL 242


>ref|XP_002512336.1| conserved hypothetical protein [Ricinus communis]
           gi|223548297|gb|EEF49788.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 240

 Score =  295 bits (754), Expect = 9e-78
 Identities = 150/227 (66%), Positives = 177/227 (77%), Gaps = 3/227 (1%)
 Frame = +2

Query: 77  NYYKPNECLSR---RNLFLTSVSSISFLGLSLCPSLHIPISYAAVASTPPSKSFLAGIAN 247
           N  KPN  L     +  FL   +S+  + L+       P+  +   S+ PSK  L+GIAN
Sbjct: 18  NTLKPNPTLRSNVSKRQFLLKTTSLGVISLTT----QNPLIQSLAESSSPSKPGLSGIAN 73

Query: 248 TKSWFQFFGDGFSIRVPPDFKDFTEPEDYSAGLSLYGDKAKPKVFAARFASSDGSEVVSV 427
           TKSWFQF+GDGFSIRVPP F+D  EPED++AGLSLYGDKAKP+ FAARFASSDGSEV+SV
Sbjct: 74  TKSWFQFYGDGFSIRVPPQFQDIMEPEDFNAGLSLYGDKAKPRTFAARFASSDGSEVLSV 133

Query: 428 VIRTSNSLKITFLEAKDITDIGSLKEAAKLFVPGGSTLYSARTIKIKEDEGFRNYYYYEF 607
           VIR SN LKITFLEAKDITD+GSLKEAAK+FVPGGSTLYSAR IK+KE+EGFR YY+YEF
Sbjct: 134 VIRPSNQLKITFLEAKDITDLGSLKEAAKVFVPGGSTLYSARAIKVKEEEGFRTYYFYEF 193

Query: 608 HREGEHFAVVTAVNRGKVYIAGAAAPQRKWEDDGVKLRSAAVSLTLL 748
            RE +H A+V A+N GK  IAGA APQ +W+ DGVKLRSAA+SLT+L
Sbjct: 194 GREEQHVALVAAINSGKAIIAGATAPQSRWDTDGVKLRSAAISLTVL 240


>ref|XP_002319030.1| predicted protein [Populus trichocarpa] gi|222857406|gb|EEE94953.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  289 bits (740), Expect = 4e-76
 Identities = 149/230 (64%), Positives = 176/230 (76%), Gaps = 4/230 (1%)
 Frame = +2

Query: 71  NNNYYKPNECLSRRNLFLT-SVSSISFLGLSLCP---SLHIPISYAAVASTPPSKSFLAG 238
           N N Y P       +L  T S     F   SLC    +   P++ A    +PP KS L+ 
Sbjct: 21  NPNPYSPKPTPHATSLPSTISKRQFIFKTTSLCLISLATQHPLAQALAEPSPPLKSVLSI 80

Query: 239 IANTKSWFQFFGDGFSIRVPPDFKDFTEPEDYSAGLSLYGDKAKPKVFAARFASSDGSEV 418
           +ANTKSWFQF+GDGF+IRVPP F+D  EPEDYSAGLSLYGDKAKPK FAARFASSDGSEV
Sbjct: 81  LANTKSWFQFYGDGFAIRVPPQFEDIMEPEDYSAGLSLYGDKAKPKTFAARFASSDGSEV 140

Query: 419 VSVVIRTSNSLKITFLEAKDITDIGSLKEAAKLFVPGGSTLYSARTIKIKEDEGFRNYYY 598
           ++VV+R SN LKITFLEAKDITD+GSLKEAAKLFVPGG+TL+SART+KIKE+EG+R YY+
Sbjct: 141 LNVVVRPSNQLKITFLEAKDITDLGSLKEAAKLFVPGGTTLFSARTLKIKEEEGYRTYYF 200

Query: 599 YEFHREGEHFAVVTAVNRGKVYIAGAAAPQRKWEDDGVKLRSAAVSLTLL 748
           YEF R+ +H A+V  VN GK  IAGA APQ KW++DGVKLRSA +SLT+L
Sbjct: 201 YEFGRDDQHAALVAVVNSGKAIIAGATAPQSKWDEDGVKLRSAVISLTVL 250


>ref|XP_004156434.1| PREDICTED: uncharacterized protein LOC101230696 isoform 2 [Cucumis
           sativus]
          Length = 249

 Score =  280 bits (716), Expect = 2e-73
 Identities = 140/215 (65%), Positives = 167/215 (77%)
 Frame = +2

Query: 104 SRRNLFLTSVSSISFLGLSLCPSLHIPISYAAVASTPPSKSFLAGIANTKSWFQFFGDGF 283
           S+R+  L + S      +  CP +       +  ++P SK  L  IANTKSWFQF+GDGF
Sbjct: 41  SKRHFILKTASLCLISFIPKCPVVQ------SSENSPTSKPGLPAIANTKSWFQFYGDGF 94

Query: 284 SIRVPPDFKDFTEPEDYSAGLSLYGDKAKPKVFAARFASSDGSEVVSVVIRTSNSLKITF 463
           SIRVPP F+D TEPEDYSAGLSLYGDKAK K FAARF S DGSEV+SVV R +N LKITF
Sbjct: 95  SIRVPPQFEDLTEPEDYSAGLSLYGDKAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITF 154

Query: 464 LEAKDITDIGSLKEAAKLFVPGGSTLYSARTIKIKEDEGFRNYYYYEFHREGEHFAVVTA 643
           LEAKDITDIGSL+EAAK+FVPGGSTL+SART KIKEDEGFR YY+YEF +  +H A+V  
Sbjct: 155 LEAKDITDIGSLREAAKIFVPGGSTLFSARTFKIKEDEGFRTYYFYEFGKNEQHVALVAT 214

Query: 644 VNRGKVYIAGAAAPQRKWEDDGVKLRSAAVSLTLL 748
           VN G+V++AGA AP  KW++DG+KLRSAA+SLT+L
Sbjct: 215 VNSGQVFVAGATAPVSKWDEDGIKLRSAAISLTVL 249


Top