BLASTX nr result

ID: Bupleurum21_contig00002953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002953
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272165.1| PREDICTED: probable CCR4-associated factor 1...   505   e-141
ref|XP_002299263.1| predicted protein [Populus trichocarpa] gi|2...   503   e-140
ref|XP_002527306.1| ccr4-associated factor, putative [Ricinus co...   497   e-138
ref|XP_002303842.1| predicted protein [Populus trichocarpa] gi|2...   496   e-138
ref|XP_003531734.1| PREDICTED: probable CCR4-associated factor 1...   480   e-133

>ref|XP_002272165.1| PREDICTED: probable CCR4-associated factor 1 homolog 7 isoform 1
            [Vitis vinifera]
          Length = 274

 Score =  505 bits (1301), Expect = e-141
 Identities = 241/272 (88%), Positives = 259/272 (95%)
 Frame = +2

Query: 356  MSLLPKNDLIEIREVWDDNLEEELDLIRDIVDEFPYIAMDTEFPGIAIRPVGNFKNSNDY 535
            MSLLPK+D I+IREVW+DNLEEE  LIR IVDEFP+IAMDTEFPGI +RPVGNFKNSNDY
Sbjct: 1    MSLLPKSDSIQIREVWNDNLEEEFALIRGIVDEFPFIAMDTEFPGIVLRPVGNFKNSNDY 60

Query: 536  HYQTLKDNVDMLKLIQLGLTFSDEEGNLPRCGSDKYYIWQFNFRDFNVNEDIFAHDSIEL 715
            HYQTLKDNVDMLKLIQ+GLTFSDE+GNLP CG+DKY IWQFNFR+FNVNED+FA+DSIEL
Sbjct: 61   HYQTLKDNVDMLKLIQMGLTFSDEQGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL 120

Query: 716  LRQSGIDFKKNNEMGIDAQRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCQNLP 895
            LRQSGIDF KNNE GIDA RFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTC+NLP
Sbjct: 121  LRQSGIDFMKNNEKGIDAVRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCKNLP 180

Query: 896  DTQAGFFSLINIYFPTIYDIKHLMKYCNSLHGGLNKLAELLEVERVGVSHQAGSDSLLTS 1075
            DTQAGFF+LIN+YFP +YDIKHLMK+CNSLHGGLNKLAELLEVERVG+ HQAGSDSLLTS
Sbjct: 181  DTQAGFFNLINMYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 1076 CTFRKLKENFFSGSLEKYSGVLYGLGVEN*QN 1171
            CTFRKLKENFFSGSLEKY+GVLYGLGVEN QN
Sbjct: 241  CTFRKLKENFFSGSLEKYAGVLYGLGVENGQN 272


>ref|XP_002299263.1| predicted protein [Populus trichocarpa] gi|222846521|gb|EEE84068.1|
            predicted protein [Populus trichocarpa]
          Length = 274

 Score =  503 bits (1295), Expect = e-140
 Identities = 242/272 (88%), Positives = 258/272 (94%)
 Frame = +2

Query: 356  MSLLPKNDLIEIREVWDDNLEEELDLIRDIVDEFPYIAMDTEFPGIAIRPVGNFKNSNDY 535
            MSLL K D I IREVW+DNLEEE   IR+IVD+FPYIAMDTEFPGI +RPVGNFKNSNDY
Sbjct: 1    MSLLLKGDSILIREVWNDNLEEEFAHIREIVDDFPYIAMDTEFPGIVLRPVGNFKNSNDY 60

Query: 536  HYQTLKDNVDMLKLIQLGLTFSDEEGNLPRCGSDKYYIWQFNFRDFNVNEDIFAHDSIEL 715
            HYQTLKDNVDMLKLIQLGLTFSDE+GNLP CG+DKY IWQFNFR+FNVNED+FA+DSIEL
Sbjct: 61   HYQTLKDNVDMLKLIQLGLTFSDEQGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL 120

Query: 716  LRQSGIDFKKNNEMGIDAQRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCQNLP 895
            LRQSGIDFKKNNE GIDA RFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCQNLP
Sbjct: 121  LRQSGIDFKKNNENGIDAVRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 896  DTQAGFFSLINIYFPTIYDIKHLMKYCNSLHGGLNKLAELLEVERVGVSHQAGSDSLLTS 1075
            DTQAGFF+LIN+YFPT+YDIKHLMK+CNSLHGGLNKLAELLEVERVG+ HQAGSDSLLT+
Sbjct: 181  DTQAGFFNLINMYFPTLYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTA 240

Query: 1076 CTFRKLKENFFSGSLEKYSGVLYGLGVEN*QN 1171
            CTFRKLKENFFSGSLEKY+GVLYGLGVEN QN
Sbjct: 241  CTFRKLKENFFSGSLEKYAGVLYGLGVENGQN 272


>ref|XP_002527306.1| ccr4-associated factor, putative [Ricinus communis]
            gi|223533306|gb|EEF35058.1| ccr4-associated factor,
            putative [Ricinus communis]
          Length = 274

 Score =  497 bits (1280), Expect = e-138
 Identities = 237/272 (87%), Positives = 258/272 (94%)
 Frame = +2

Query: 356  MSLLPKNDLIEIREVWDDNLEEELDLIRDIVDEFPYIAMDTEFPGIAIRPVGNFKNSNDY 535
            MSLL K D I+IREVW+DNLEEE  LIR+IVDE+ YIAMDTEFPGI +RPVGNFKNSN+Y
Sbjct: 1    MSLLLKGDSIQIREVWNDNLEEEFSLIREIVDEYSYIAMDTEFPGIVLRPVGNFKNSNEY 60

Query: 536  HYQTLKDNVDMLKLIQLGLTFSDEEGNLPRCGSDKYYIWQFNFRDFNVNEDIFAHDSIEL 715
            HYQTLKDNVDMLKLIQLGLTFSDE+GNLP CG+DKY IWQFNFR+FNVNED+FA+DSIEL
Sbjct: 61   HYQTLKDNVDMLKLIQLGLTFSDEQGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL 120

Query: 716  LRQSGIDFKKNNEMGIDAQRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCQNLP 895
            LRQSGIDFKKNNE GIDA RFGELLMSSGIVLND+V+WVTFHSGYDFGYLLKLLTCQNLP
Sbjct: 121  LRQSGIDFKKNNERGIDAMRFGELLMSSGIVLNDSVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 896  DTQAGFFSLINIYFPTIYDIKHLMKYCNSLHGGLNKLAELLEVERVGVSHQAGSDSLLTS 1075
            DTQ GFF+LIN+YFPT+YDIKHLMK+CNSLHGGLNKLAELLEVERVG+ HQAGSDSLLT+
Sbjct: 181  DTQLGFFNLINMYFPTLYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTA 240

Query: 1076 CTFRKLKENFFSGSLEKYSGVLYGLGVEN*QN 1171
            CTFRKLKENFFSGSLEKY+GVLYGLGVEN Q+
Sbjct: 241  CTFRKLKENFFSGSLEKYAGVLYGLGVENGQS 272


>ref|XP_002303842.1| predicted protein [Populus trichocarpa] gi|222841274|gb|EEE78821.1|
            predicted protein [Populus trichocarpa]
          Length = 274

 Score =  496 bits (1276), Expect = e-138
 Identities = 236/271 (87%), Positives = 256/271 (94%)
 Frame = +2

Query: 356  MSLLPKNDLIEIREVWDDNLEEELDLIRDIVDEFPYIAMDTEFPGIAIRPVGNFKNSNDY 535
            MSLLPK D I IREVW+DNLEEE  LIR+IVD+FPYIAMDTEFPGI +RPVGNFKNSNDY
Sbjct: 1    MSLLPKGDSIHIREVWNDNLEEEFALIREIVDDFPYIAMDTEFPGIVLRPVGNFKNSNDY 60

Query: 536  HYQTLKDNVDMLKLIQLGLTFSDEEGNLPRCGSDKYYIWQFNFRDFNVNEDIFAHDSIEL 715
            HYQTLKDNVD+LKLIQLGLTFSD++GNLP CG+DKY IWQFNFR+FNVNED+FA+DSIEL
Sbjct: 61   HYQTLKDNVDVLKLIQLGLTFSDDQGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL 120

Query: 716  LRQSGIDFKKNNEMGIDAQRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCQNLP 895
            LRQSGID  KNNE GIDA RFGELLMSSGIVLND+VYWVTFHSGYDFGYLLKLLTCQNLP
Sbjct: 121  LRQSGIDLNKNNENGIDAVRFGELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 896  DTQAGFFSLINIYFPTIYDIKHLMKYCNSLHGGLNKLAELLEVERVGVSHQAGSDSLLTS 1075
            DTQAGFF+LIN+YFPT+YDIKHLMK+CNSLHGGLNKLAELLEVER+G+ HQAGSDSLLT+
Sbjct: 181  DTQAGFFNLINMYFPTLYDIKHLMKFCNSLHGGLNKLAELLEVERIGICHQAGSDSLLTA 240

Query: 1076 CTFRKLKENFFSGSLEKYSGVLYGLGVEN*Q 1168
            CTFRKLKENFFS SLEKY+GVLYGLGVEN Q
Sbjct: 241  CTFRKLKENFFSCSLEKYAGVLYGLGVENGQ 271


>ref|XP_003531734.1| PREDICTED: probable CCR4-associated factor 1 homolog 7-like [Glycine
            max]
          Length = 281

 Score =  480 bits (1235), Expect = e-133
 Identities = 231/275 (84%), Positives = 252/275 (91%), Gaps = 6/275 (2%)
 Frame = +2

Query: 362  LLPKNDLIEIREVWDDNLEEELDLIRDIVDEFPYIAMDTEFPGIAIRPVGNFKNSNDYHY 541
            +L K+D I+IREVW+DNLEEE  LIR+IVD +PYIAMDTEFPGI +RPVGNFKNS DYHY
Sbjct: 4    ILAKSDSIQIREVWNDNLEEEFALIREIVDNYPYIAMDTEFPGIVLRPVGNFKNSYDYHY 63

Query: 542  QTLKDNVDMLKLIQLGLTFSDEEGNLPRCGSDKYY------IWQFNFRDFNVNEDIFAHD 703
            QTLKDNVDMLKLIQLGLTFSDE GNLP CG D         IWQFNFR+FNVNED+FA+D
Sbjct: 64   QTLKDNVDMLKLIQLGLTFSDEHGNLPMCGGDDEESDTCCCIWQFNFREFNVNEDVFAND 123

Query: 704  SIELLRQSGIDFKKNNEMGIDAQRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTC 883
            SIELLRQSGIDFK+NNE GIDA RFGELLMSSGIVLNDN++WVTFHSGYDFGYLLKLLTC
Sbjct: 124  SIELLRQSGIDFKRNNENGIDAHRFGELLMSSGIVLNDNIHWVTFHSGYDFGYLLKLLTC 183

Query: 884  QNLPDTQAGFFSLINIYFPTIYDIKHLMKYCNSLHGGLNKLAELLEVERVGVSHQAGSDS 1063
            Q+LPDTQ GFF+LIN+YFPT+YDIKHLMK+CNSLHGGLNKLAELLEVERVG+SHQAGSDS
Sbjct: 184  QDLPDTQVGFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGISHQAGSDS 243

Query: 1064 LLTSCTFRKLKENFFSGSLEKYSGVLYGLGVEN*Q 1168
            LLTSCTFRKLK+NFFSGSLEKY+GVLYGLGVEN Q
Sbjct: 244  LLTSCTFRKLKDNFFSGSLEKYAGVLYGLGVENGQ 278


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