BLASTX nr result

ID: Bupleurum21_contig00002945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002945
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284528.1| PREDICTED: transcription factor ICE1-like [V...   110   2e-22
emb|CAN67898.1| hypothetical protein VITISV_040396 [Vitis vinifera]   110   2e-22
ref|XP_002321747.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
gb|ABN58427.1| inducer of CBF expression 1 [Populus trichocarpa]      105   7e-21
gb|ADK91821.1| inducer of CBF expression 2 protein [Populus suav...   102   5e-20

>ref|XP_002284528.1| PREDICTED: transcription factor ICE1-like [Vitis vinifera]
          Length = 550

 Score =  110 bits (275), Expect = 2e-22
 Identities = 83/216 (38%), Positives = 101/216 (46%), Gaps = 6/216 (2%)
 Frame = -2

Query: 632 VDTSNLSSEAHYSTTQLLELTQNNG----GFVSQG--GFEPTGNVNLNSNLFLNRSKLLN 471
           ++T NL SE  +  T++L+LT+N+     GF S G  GFE  G++N   +LF+NRSKLL 
Sbjct: 182 MNTPNLISEPQFGITRVLQLTENSAPIGAGFSSSGIRGFEE-GSMN---SLFVNRSKLLR 237

Query: 470 PLDKFTSVGAQPTLFQKRAAQRKNSXXXXXXXXXXXXXXXXXXXXXGDKKRKSSFGDDFD 291
           PL+ F SVGAQPTLFQKRAA RKN                       D K K   G++ D
Sbjct: 238 PLETFPSVGAQPTLFQKRAALRKNLADNGSILGGLGPEGGQVLSGVEDDKGKREMGEEND 297

Query: 290 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKLDDADKXXXX 111
                                                            K+++  K    
Sbjct: 298 R-----------------KWRNSNAEDIEDASIDASGLNYDSDELTENNKMEENGKNSGN 340

Query: 110 XXXXXSTVTNGDLKGKKKGLPAKNLMAERRRRKKLN 3
                STVT GD KGKKKGLPAKNLMAERRRRKKLN
Sbjct: 341 NSNANSTVTGGDHKGKKKGLPAKNLMAERRRRKKLN 376


>emb|CAN67898.1| hypothetical protein VITISV_040396 [Vitis vinifera]
          Length = 585

 Score =  110 bits (275), Expect = 2e-22
 Identities = 83/216 (38%), Positives = 101/216 (46%), Gaps = 6/216 (2%)
 Frame = -2

Query: 632 VDTSNLSSEAHYSTTQLLELTQNNG----GFVSQG--GFEPTGNVNLNSNLFLNRSKLLN 471
           ++T NL SE  +  T++L+LT+N+     GF S G  GFE  G++N   +LF+NRSKLL 
Sbjct: 182 MNTPNLISEPQFGITRVLQLTENSAPIGAGFSSSGIRGFEE-GSMN---SLFVNRSKLLR 237

Query: 470 PLDKFTSVGAQPTLFQKRAAQRKNSXXXXXXXXXXXXXXXXXXXXXGDKKRKSSFGDDFD 291
           PL+ F SVGAQPTLFQKRAA RKN                       D K K   G++ D
Sbjct: 238 PLETFPSVGAQPTLFQKRAALRKNLADNGSILGGLGPEGGQVLSGVEDDKGKREMGEEND 297

Query: 290 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKLDDADKXXXX 111
                                                            K+++  K    
Sbjct: 298 R-----------------KWRNSNAEDIEDASIDASGLNYDSDELTENNKMEENGKNSGN 340

Query: 110 XXXXXSTVTNGDLKGKKKGLPAKNLMAERRRRKKLN 3
                STVT GD KGKKKGLPAKNLMAERRRRKKLN
Sbjct: 341 NSNANSTVTGGDHKGKKKGLPAKNLMAERRRRKKLN 376


>ref|XP_002321747.1| predicted protein [Populus trichocarpa] gi|222868743|gb|EEF05874.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score =  108 bits (271), Expect = 6e-22
 Identities = 80/212 (37%), Positives = 98/212 (46%), Gaps = 1/212 (0%)
 Frame = -2

Query: 635 HVDTSNLSSEAHYSTTQLLELTQNNGGFVSQGGFEPTGNVNLNSNLFLNRSKLLNPLDKF 456
           ++   NL S+  +S++++L+L +N  G  S  GF+     N  + LFLNRSKLL PL+ +
Sbjct: 121 NISIPNLCSDPQFSSSRMLQLPENGPGLTSFRGFDE----NSGNQLFLNRSKLLRPLETY 176

Query: 455 TSVGAQPTLFQKRAAQRKNSXXXXXXXXXXXXXXXXXXXXXGDKKRKSSFGDDFDNXXXX 276
            S+GAQPTLFQKRAA RKN                       DKKRK S GDDF      
Sbjct: 177 PSMGAQPTLFQKRAALRKN--------------------LENDKKRKFSSGDDF------ 210

Query: 275 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKLDDADKXXXXXXXXX 96
                                                      TK+++  K         
Sbjct: 211 ----------------------LEDVSIDGSGLNYDSDEFTENTKVEEIGKNGGISSKAN 248

Query: 95  STVTNG-DLKGKKKGLPAKNLMAERRRRKKLN 3
           S VT G D KGKKKGLPAKNLMAERRRRKKLN
Sbjct: 249 SGVTGGVDQKGKKKGLPAKNLMAERRRRKKLN 280


>gb|ABN58427.1| inducer of CBF expression 1 [Populus trichocarpa]
          Length = 558

 Score =  105 bits (262), Expect = 7e-21
 Identities = 80/218 (36%), Positives = 97/218 (44%), Gaps = 8/218 (3%)
 Frame = -2

Query: 632 VDTSNLSSEAHYSTTQLLELTQNNGGFVSQGGFEPTGNVNLNSNLFLNRSKLLNPLDKFT 453
           +   NL S+  +S++++L+L +N  G  S  GF+     N  + LFLNRSKLL PL+ + 
Sbjct: 199 ISIPNLCSDPQFSSSRMLQLPENGPGLTSFRGFDE----NSGNQLFLNRSKLLRPLETYP 254

Query: 452 SVGAQPTLFQKRAAQRKNSXXXXXXXXXXXXXXXXXXXXXG-------DKKRKSSFGDDF 294
           S+GAQPTLFQKRAA RKN                              DKKRK S GDDF
Sbjct: 255 SMGAQPTLFQKRAALRKNLGDNGGNLGLLSGIDRDKGKSEMTQISEENDKKRKFSSGDDF 314

Query: 293 DNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKLDDADKXXX 114
                                                            TK+++  K   
Sbjct: 315 ----------------------------LEDVSIDGSGLNYDSDEFTENTKVEEIGKNGG 346

Query: 113 XXXXXXSTVTNG-DLKGKKKGLPAKNLMAERRRRKKLN 3
                 S VT G D KGKKKGLPAKNLMAERRRRKKLN
Sbjct: 347 ISSKANSGVTGGVDQKGKKKGLPAKNLMAERRRRKKLN 384


>gb|ADK91821.1| inducer of CBF expression 2 protein [Populus suaveolens]
          Length = 546

 Score =  102 bits (255), Expect = 5e-20
 Identities = 78/212 (36%), Positives = 96/212 (45%), Gaps = 2/212 (0%)
 Frame = -2

Query: 632 VDTSNLSSEAHYSTTQLLELTQNNGGFVSQGGFEPTGNVNLNSNLFLNRSKLLNPLDKFT 453
           +   NL S+  +S++++L+L +N  GF    GF     ++ N  LF NRSKLL PL+ + 
Sbjct: 196 ISIPNLCSDPQFSSSRMLQLPENGPGF---NGFRGLDEISGNQ-LFFNRSKLLRPLETYP 251

Query: 452 SVGAQPTLFQKRAAQRKNSXXXXXXXXXXXXXXXXXXXXXGDKKRKSSFGDDFDNXXXXX 273
           S+GAQPTLFQKRAA RKN                       DKKRK S GDDF       
Sbjct: 252 SMGAQPTLFQKRAALRKN---LGEVERDKGKREMTQISEENDKKRKFSSGDDF------- 301

Query: 272 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKLDDADKXXXXXXXXXS 93
                                                     TK+++  K         S
Sbjct: 302 ---------------------LEDVSFDGSGLNYDSDEFTENTKVEETGKNGGNSSKANS 340

Query: 92  TVTNG--DLKGKKKGLPAKNLMAERRRRKKLN 3
            VT G  D KGKK+GLPAKNLMAERRRRKKLN
Sbjct: 341 GVTGGGVDQKGKKRGLPAKNLMAERRRRKKLN 372


Top