BLASTX nr result

ID: Bupleurum21_contig00002937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002937
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK84478.1| unknown [Solanum lycopersicum]                          59   3e-07
ref|XP_002514042.1| conserved hypothetical protein [Ricinus comm...    59   4e-07
ref|XP_002873462.1| hypothetical protein ARALYDRAFT_909005 [Arab...    57   2e-06
ref|XP_002310309.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_003613048.1| MscS-Like mechanosensitive ion channel MSCL8...    56   3e-06

>gb|AAK84478.1| unknown [Solanum lycopersicum]
          Length = 621

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
 Frame = +3

Query: 3   SKPPKQDSERSVS--------VLEDNILLGVALDGSRRTLPIDDEDIAQSSTVEEPNELA 158
           S P ++D ++ VS         LE+NI+LGVAL+GS+RTLPI +E+++      E  E+A
Sbjct: 526 SLPKREDEKQQVSQPSVPSKPALEENIVLGVALEGSKRTLPI-EEELSPPPNPAESKEMA 584

Query: 159 TSHKGNGSTALTRKGKDD-QMPPGTRAVSPDQREKE 263
           TS   + ++ +  K K D Q      + +PDQ  K+
Sbjct: 585 TSRSSSNASTIAEKDKQDGQRSNRPNSTAPDQSSKD 620


>ref|XP_002514042.1| conserved hypothetical protein [Ricinus communis]
           gi|223547128|gb|EEF48625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 705

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/59 (54%), Positives = 39/59 (66%)
 Frame = +3

Query: 45  LEDNILLGVALDGSRRTLPIDDEDIAQSSTVEEPNELATSHKGNGSTALTRKGKDDQMP 221
           LE+NI+LGVAL+GS+RTLPI+DE +  S    E  ELA S  G GS    +  KD QMP
Sbjct: 639 LEENIVLGVALEGSKRTLPIEDE-MDPSPFSSESKELAASRNGGGSLTAGKDKKDSQMP 696


>ref|XP_002873462.1| hypothetical protein ARALYDRAFT_909005 [Arabidopsis lyrata subsp.
           lyrata] gi|297319299|gb|EFH49721.1| hypothetical protein
           ARALYDRAFT_909005 [Arabidopsis lyrata subsp. lyrata]
          Length = 673

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
 Frame = +3

Query: 6   KPPKQD------SERSVSVLEDNILLGVALDGSRRTLPIDDEDIAQSSTVEEPNELATSH 167
           K PK D      S  S S LE+NI+LGVAL+GS+RTLPI +E+I  SS   +  EL  + 
Sbjct: 586 KSPKSDETDTSSSSTSRSALEENIVLGVALEGSKRTLPI-EEEIHSSSMETDAKELTGAR 644

Query: 168 K--GNGSTALTRKGKDDQMPPGTRA 236
           +  GNG     ++ KD Q  P + A
Sbjct: 645 RSGGNGPLVADKEQKDSQSQPNSGA 669


>ref|XP_002310309.1| predicted protein [Populus trichocarpa] gi|222853212|gb|EEE90759.1|
           predicted protein [Populus trichocarpa]
          Length = 576

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/64 (50%), Positives = 41/64 (64%)
 Frame = +3

Query: 33  SVSVLEDNILLGVALDGSRRTLPIDDEDIAQSSTVEEPNELATSHKGNGSTALTRKGKDD 212
           S S LE+NI+LGVAL+GS+RTLPI DEDIA   T  E  E+A + +    +  T K + D
Sbjct: 507 SRSALEENIVLGVALEGSKRTLPI-DEDIASHPTPPEEKEMAAASQNGTGSPTTVKDRRD 565

Query: 213 QMPP 224
             PP
Sbjct: 566 GPPP 569


>ref|XP_003613048.1| MscS-Like mechanosensitive ion channel MSCL8 [Medicago truncatula]
           gi|355514383|gb|AES96006.1| MscS-Like mechanosensitive
           ion channel MSCL8 [Medicago truncatula]
          Length = 735

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/47 (61%), Positives = 36/47 (76%)
 Frame = +3

Query: 42  VLEDNILLGVALDGSRRTLPIDDEDIAQSSTVEEPNELATSHKGNGS 182
           VLE+NI+LGVALDGS+RTLPI+DE    + T +E  E+A S  GNGS
Sbjct: 682 VLEENIVLGVALDGSKRTLPINDE--IDTVTTQETKEMAASQGGNGS 726


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