BLASTX nr result
ID: Bupleurum21_contig00002937
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00002937 (309 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAK84478.1| unknown [Solanum lycopersicum] 59 3e-07 ref|XP_002514042.1| conserved hypothetical protein [Ricinus comm... 59 4e-07 ref|XP_002873462.1| hypothetical protein ARALYDRAFT_909005 [Arab... 57 2e-06 ref|XP_002310309.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 ref|XP_003613048.1| MscS-Like mechanosensitive ion channel MSCL8... 56 3e-06 >gb|AAK84478.1| unknown [Solanum lycopersicum] Length = 621 Score = 59.3 bits (142), Expect = 3e-07 Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 9/96 (9%) Frame = +3 Query: 3 SKPPKQDSERSVS--------VLEDNILLGVALDGSRRTLPIDDEDIAQSSTVEEPNELA 158 S P ++D ++ VS LE+NI+LGVAL+GS+RTLPI +E+++ E E+A Sbjct: 526 SLPKREDEKQQVSQPSVPSKPALEENIVLGVALEGSKRTLPI-EEELSPPPNPAESKEMA 584 Query: 159 TSHKGNGSTALTRKGKDD-QMPPGTRAVSPDQREKE 263 TS + ++ + K K D Q + +PDQ K+ Sbjct: 585 TSRSSSNASTIAEKDKQDGQRSNRPNSTAPDQSSKD 620 >ref|XP_002514042.1| conserved hypothetical protein [Ricinus communis] gi|223547128|gb|EEF48625.1| conserved hypothetical protein [Ricinus communis] Length = 705 Score = 58.9 bits (141), Expect = 4e-07 Identities = 32/59 (54%), Positives = 39/59 (66%) Frame = +3 Query: 45 LEDNILLGVALDGSRRTLPIDDEDIAQSSTVEEPNELATSHKGNGSTALTRKGKDDQMP 221 LE+NI+LGVAL+GS+RTLPI+DE + S E ELA S G GS + KD QMP Sbjct: 639 LEENIVLGVALEGSKRTLPIEDE-MDPSPFSSESKELAASRNGGGSLTAGKDKKDSQMP 696 >ref|XP_002873462.1| hypothetical protein ARALYDRAFT_909005 [Arabidopsis lyrata subsp. lyrata] gi|297319299|gb|EFH49721.1| hypothetical protein ARALYDRAFT_909005 [Arabidopsis lyrata subsp. lyrata] Length = 673 Score = 57.0 bits (136), Expect = 2e-06 Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 8/85 (9%) Frame = +3 Query: 6 KPPKQD------SERSVSVLEDNILLGVALDGSRRTLPIDDEDIAQSSTVEEPNELATSH 167 K PK D S S S LE+NI+LGVAL+GS+RTLPI +E+I SS + EL + Sbjct: 586 KSPKSDETDTSSSSTSRSALEENIVLGVALEGSKRTLPI-EEEIHSSSMETDAKELTGAR 644 Query: 168 K--GNGSTALTRKGKDDQMPPGTRA 236 + GNG ++ KD Q P + A Sbjct: 645 RSGGNGPLVADKEQKDSQSQPNSGA 669 >ref|XP_002310309.1| predicted protein [Populus trichocarpa] gi|222853212|gb|EEE90759.1| predicted protein [Populus trichocarpa] Length = 576 Score = 57.0 bits (136), Expect = 2e-06 Identities = 32/64 (50%), Positives = 41/64 (64%) Frame = +3 Query: 33 SVSVLEDNILLGVALDGSRRTLPIDDEDIAQSSTVEEPNELATSHKGNGSTALTRKGKDD 212 S S LE+NI+LGVAL+GS+RTLPI DEDIA T E E+A + + + T K + D Sbjct: 507 SRSALEENIVLGVALEGSKRTLPI-DEDIASHPTPPEEKEMAAASQNGTGSPTTVKDRRD 565 Query: 213 QMPP 224 PP Sbjct: 566 GPPP 569 >ref|XP_003613048.1| MscS-Like mechanosensitive ion channel MSCL8 [Medicago truncatula] gi|355514383|gb|AES96006.1| MscS-Like mechanosensitive ion channel MSCL8 [Medicago truncatula] Length = 735 Score = 56.2 bits (134), Expect = 3e-06 Identities = 29/47 (61%), Positives = 36/47 (76%) Frame = +3 Query: 42 VLEDNILLGVALDGSRRTLPIDDEDIAQSSTVEEPNELATSHKGNGS 182 VLE+NI+LGVALDGS+RTLPI+DE + T +E E+A S GNGS Sbjct: 682 VLEENIVLGVALDGSKRTLPINDE--IDTVTTQETKEMAASQGGNGS 726