BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002904
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           144   1e-32
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   144   1e-32
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       134   1e-29
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   132   4e-29

>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/152 (47%), Positives = 96/152 (63%)
 Frame = +2

Query: 5    LVSFTSFSGLTINNGKSQCFFGNVDEDTVQLILHHTGYMKGTLPVMYLGLPLISGRLTFS 184
            L  F  +SGL +N  KSQ F   +D    ++     G+  GT P+ YLGLPL+  +L  +
Sbjct: 579  LDDFADWSGLKVNKDKSQLFQAGLDLSE-RITSAAYGFPAGTFPIRYLGLPLMCRKLRIA 637

Query: 185  ACQPLIDKLCSKIDSWSSRHLSFAGRIQLIRVVLFGIVGFWSSYLFLPVNVIKRIQSILS 364
               PL++KL +++ SW S+ LSFAGR QLI  V+FG++ FW S   LP   IK+I+S+ S
Sbjct: 638  DYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCS 697

Query: 365  NFLWSGDHSGRSAHKVSWDVCCAPKSEGGLGF 460
             FLW+G   GR + KVSW  CC PKSEGGLGF
Sbjct: 698  KFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGF 729


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/152 (47%), Positives = 96/152 (63%)
 Frame = +2

Query: 5    LVSFTSFSGLTINNGKSQCFFGNVDEDTVQLILHHTGYMKGTLPVMYLGLPLISGRLTFS 184
            L  F  +SGL +N  KSQ F   +D    ++     G+  GT P+ YLGLPL+  +L  +
Sbjct: 579  LDDFADWSGLKVNKDKSQLFQAGLDLSE-RITSAAYGFPAGTFPIRYLGLPLMCRKLRIA 637

Query: 185  ACQPLIDKLCSKIDSWSSRHLSFAGRIQLIRVVLFGIVGFWSSYLFLPVNVIKRIQSILS 364
               PL++KL +++ SW S+ LSFAGR QLI  V+FG++ FW S   LP   IK+I+S+ S
Sbjct: 638  DYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCS 697

Query: 365  NFLWSGDHSGRSAHKVSWDVCCAPKSEGGLGF 460
             FLW+G   GR + KVSW  CC PKSEGGLGF
Sbjct: 698  KFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGF 729


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/152 (44%), Positives = 92/152 (60%)
 Frame = +2

Query: 2   LLVSFTSFSGLTINNGKSQCFFGNVDEDTVQLILHHTGYMKGTLPVMYLGLPLISGRLTF 181
           +L  F   SGL  N  KS  F   V     + I+H  G+ +G LP+ YLG+PL+S RL  
Sbjct: 11  VLTKFQDLSGLYPNPNKSDIFLSGVLNAEREQIIHILGFREGELPMKYLGVPLLSSRLKA 70

Query: 182 SACQPLIDKLCSKIDSWSSRHLSFAGRIQLIRVVLFGIVGFWSSYLFLPVNVIKRIQSIL 361
             C+ L+D++ SK+  W+ R LS+AGR+QLI  VLF I  +W+S   LP  VIK ++ I+
Sbjct: 71  IYCKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIM 130

Query: 362 SNFLWSGDHSGRSAHKVSWDVCCAPKSEGGLG 457
            +FLWSG     +  KV+WD  C PK EGGLG
Sbjct: 131 KSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLG 162


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/151 (45%), Positives = 94/151 (62%)
 Frame = +2

Query: 5    LVSFTSFSGLTINNGKSQCFFGNVDEDTVQLILHHTGYMKGTLPVMYLGLPLISGRLTFS 184
            L  F S+SGL +N  KS  +   +++        + G+  GTLP+ YLGLPL++ +L  +
Sbjct: 719  LDDFASWSGLKVNKDKSHLYLAGLNQLESNANAAY-GFPIGTLPIRYLGLPLMNRKLRIA 777

Query: 185  ACQPLIDKLCSKIDSWSSRHLSFAGRIQLIRVVLFGIVGFWSSYLFLPVNVIKRIQSILS 364
              +PL++K+ ++  SW ++ LSFAGRIQLI  V+FG + FW S   LP   IKRI+S+ S
Sbjct: 778  EYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCS 837

Query: 365  NFLWSGDHSGRSAHKVSWDVCCAPKSEGGLG 457
             FLWSG+       KVSW   C PKSEGGLG
Sbjct: 838  RFLWSGNIEQAKGIKVSWAALCLPKSEGGLG 868


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/151 (43%), Positives = 94/151 (62%)
 Frame = +2

Query: 5    LVSFTSFSGLTINNGKSQCFFGNVDEDTVQLILHHTGYMKGTLPVMYLGLPLISGRLTFS 184
            L  F  +SGL +N  K+Q +   + +     +  + G+  G+LPV YLGLPL+S +LT +
Sbjct: 616  LEDFAGWSGLLMNTNKTQLYHAGLSQSESDSMASY-GFKLGSLPVRYLGLPLMSRKLTIA 674

Query: 185  ACQPLIDKLCSKIDSWSSRHLSFAGRIQLIRVVLFGIVGFWSSYLFLPVNVIKRIQSILS 364
               PLI+K+ ++ +SW  R LSFAGR+QL+  V+ GIV FW S   LP+  IK+I+S+ S
Sbjct: 675  EYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGIVNFWISSFILPLGCIKKIESLCS 734

Query: 365  NFLWSGDHSGRSAHKVSWDVCCAPKSEGGLG 457
             FLWS     +   KV+W   C PK+EGG+G
Sbjct: 735  RFLWSSRIDKKGIAKVAWSQVCLPKAEGGIG 765