BLASTX nr result

ID: Bupleurum21_contig00002894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002894
         (1367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273636.1| PREDICTED: synaptic vesicle 2-related protei...    80   9e-13
emb|CAN64534.1| hypothetical protein VITISV_042940 [Vitis vinifera]    80   9e-13
ref|XP_003529708.1| PREDICTED: synaptic vesicle 2-related protei...    80   1e-12
ref|XP_003530366.1| PREDICTED: synaptic vesicle 2-related protei...    80   2e-12
ref|XP_002310345.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-12

>ref|XP_002273636.1| PREDICTED: synaptic vesicle 2-related protein [Vitis vinifera]
            gi|297735684|emb|CBI18371.3| unnamed protein product
            [Vitis vinifera]
          Length = 495

 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 16/81 (19%)
 Frame = +3

Query: 996  VSALVTSVAGFVSVFFPKYIVLVILR----------------FLEFVPVPNSCVRMVVFS 1127
            ++A+VTS AGF+S F P YI L+ILR                FLEF+P PN    MV+FS
Sbjct: 95   ITAVVTSAAGFLSAFAPNYISLIILRCLVGLGLGGGPVLSSWFLEFIPAPNRGTWMVIFS 154

Query: 1128 IFWTVGTIIEASLGWLIMPLI 1190
             FWTVGTI+EASL W +MP +
Sbjct: 155  GFWTVGTILEASLAWCVMPTL 175


>emb|CAN64534.1| hypothetical protein VITISV_042940 [Vitis vinifera]
          Length = 461

 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 16/81 (19%)
 Frame = +3

Query: 996  VSALVTSVAGFVSVFFPKYIVLVILR----------------FLEFVPVPNSCVRMVVFS 1127
            ++A+VTS AGF+S F P YI L+ILR                FLEF+P PN    MV+FS
Sbjct: 95   ITAVVTSAAGFLSAFAPNYISLIILRCLVGLGLGGGPVLSSWFLEFIPAPNRGTWMVIFS 154

Query: 1128 IFWTVGTIIEASLGWLIMPLI 1190
             FWTVGTI+EASL W +MP +
Sbjct: 155  GFWTVGTILEASLAWCVMPTL 175


>ref|XP_003529708.1| PREDICTED: synaptic vesicle 2-related protein-like [Glycine max]
          Length = 513

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 16/79 (20%)
 Frame = +3

Query: 996  VSALVTSVAGFVSVFFPKYIVLVILR----------------FLEFVPVPNSCVRMVVFS 1127
            ++A+VT++AGF+S F P YI+L+ LR                FLEFVP PN    MVVFS
Sbjct: 122  ITAIVTALAGFLSAFAPNYILLIALRSLVGLGLGGGPVLSSWFLEFVPAPNRGTWMVVFS 181

Query: 1128 IFWTVGTIIEASLGWLIMP 1184
             FWT+GTI EASL W++MP
Sbjct: 182  AFWTLGTIFEASLAWIVMP 200


>ref|XP_003530366.1| PREDICTED: synaptic vesicle 2-related protein-like [Glycine max]
          Length = 558

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 16/79 (20%)
 Frame = +3

Query: 996  VSALVTSVAGFVSVFFPKYIVLVILR----------------FLEFVPVPNSCVRMVVFS 1127
            ++A VT++AGF+S F P YI L++LR                FLEFVP PN    MVVFS
Sbjct: 167  ITATVTALAGFLSAFAPNYIFLIVLRSLVGIGLGGGPVLSSWFLEFVPAPNRGTWMVVFS 226

Query: 1128 IFWTVGTIIEASLGWLIMP 1184
             FWT+GTI EASL W++MP
Sbjct: 227  AFWTLGTIFEASLAWIVMP 245


>ref|XP_002310345.1| predicted protein [Populus trichocarpa] gi|222853248|gb|EEE90795.1|
            predicted protein [Populus trichocarpa]
          Length = 463

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 42/79 (53%), Positives = 48/79 (60%), Gaps = 16/79 (20%)
 Frame = +3

Query: 996  VSALVTSVAGFVSVFFPKYIVLVILR----------------FLEFVPVPNSCVRMVVFS 1127
            V+A++TSVAGF+S F P YI L+I R                FLEFVP PN    MVVFS
Sbjct: 95   VTAIMTSVAGFLSAFAPNYIALLISRCLVGFGIGGGPVLLAWFLEFVPAPNRGTWMVVFS 154

Query: 1128 IFWTVGTIIEASLGWLIMP 1184
             FWTVGTI E  L W+IMP
Sbjct: 155  AFWTVGTIFEGGLAWIIMP 173


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