BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002883
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...   100   2e-19
emb|CBI19420.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|NP_001190458.1| TBP-associated factor 4 [Arabidopsis thalian...    88   7e-16
ref|XP_002863689.1| transcription initiation factor [Arabidopsis...    88   7e-16
ref|NP_199127.3| TBP-associated factor 4 [Arabidopsis thaliana] ...    88   7e-16

>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 67/145 (46%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
 Frame = +1

Query: 103 LEQGN-VSGNLGDEYTEMQQSRMGFSTSTGIMQSNAGXXXXXXXXXXXXXXGARLXXXXX 279
           +E+GN + G L DE  E Q SR+GFS+S  ++  N+               G+R+     
Sbjct: 508 VEKGNAIPGILKDESLEKQASRIGFSSSMSMLPPNSVSSSMGTHLDPNVTLGSRIPSVTS 567

Query: 280 XXXXXXXXXXXXXXXXXXXXXXSESLGTESVPPIKKQKVSHS--DQSIEQLNDVTAVSGV 453
                                  E+LG+    P KKQKVS +  DQSIEQLNDVTAVSGV
Sbjct: 568 PVGINTRTPPKKPSIGQKKPL--EALGSSPPLPSKKQKVSGAFLDQSIEQLNDVTAVSGV 625

Query: 454 NLREEEEQLFSGPKEDTRFSEASRR 528
           NLREEEEQLFSGPKED+R SEASRR
Sbjct: 626 NLREEEEQLFSGPKEDSRVSEASRR 650


>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 61/133 (45%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
 Frame = +1

Query: 136 DEYTEMQQSRMGFSTSTGIMQSNAGXXXXXXXXXXXXXXGARLXXXXXXXXXXXXXXXXX 315
           +E  E Q SR+GFS+S  ++  N+               G+R+                 
Sbjct: 477 NESLEKQASRIGFSSSMSMLPPNSVSSSMGTHLDPNVTLGSRIPSVTSPVGINTRTPPKK 536

Query: 316 XXXXXXXXXXSESLGTESVPPIKKQKVSHS--DQSIEQLNDVTAVSGVNLREEEEQLFSG 489
                      E+LG+    P KKQKVS +  DQSIEQLNDVTAVSGVNLREEEEQLFSG
Sbjct: 537 PSIGQKKPL--EALGSSPPLPSKKQKVSGAFLDQSIEQLNDVTAVSGVNLREEEEQLFSG 594

Query: 490 PKEDTRFSEASRR 528
           PKED+R SEASRR
Sbjct: 595 PKEDSRVSEASRR 607


>ref|NP_001190458.1| TBP-associated factor 4 [Arabidopsis thaliana]
           gi|332007531|gb|AED94914.1| TBP-associated factor 4
           [Arabidopsis thaliana]
          Length = 852

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 48/62 (77%), Positives = 52/62 (83%), Gaps = 2/62 (3%)
 Frame = +1

Query: 349 ESLGTESVPPIKKQKVSHS--DQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDTRFSEAS 522
           E+LG+   PP KKQKV+ +  DQSIEQLNDVTAVSGVNLREEEEQLFSG KED R SEAS
Sbjct: 510 ETLGSSPPPPSKKQKVAGNSMDQSIEQLNDVTAVSGVNLREEEEQLFSGAKEDGRVSEAS 569

Query: 523 RR 528
           RR
Sbjct: 570 RR 571


>ref|XP_002863689.1| transcription initiation factor [Arabidopsis lyrata subsp. lyrata]
           gi|297309524|gb|EFH39948.1| transcription initiation
           factor [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 48/62 (77%), Positives = 52/62 (83%), Gaps = 2/62 (3%)
 Frame = +1

Query: 349 ESLGTESVPPIKKQKVSHS--DQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDTRFSEAS 522
           E+LG+   PP KKQKV+ +  DQSIEQLNDVTAVSGVNLREEEEQLFSG KED R SEAS
Sbjct: 511 ETLGSSPPPPSKKQKVAGNSMDQSIEQLNDVTAVSGVNLREEEEQLFSGAKEDGRVSEAS 570

Query: 523 RR 528
           RR
Sbjct: 571 RR 572


>ref|NP_199127.3| TBP-associated factor 4 [Arabidopsis thaliana]
           gi|38490053|gb|AAR21620.1| TATA-binding protein
           associated factor 4b [Arabidopsis thaliana]
           gi|110738778|dbj|BAF01312.1| hypothetical protein
           [Arabidopsis thaliana] gi|332007530|gb|AED94913.1|
           TBP-associated factor 4 [Arabidopsis thaliana]
          Length = 823

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 48/62 (77%), Positives = 52/62 (83%), Gaps = 2/62 (3%)
 Frame = +1

Query: 349 ESLGTESVPPIKKQKVSHS--DQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDTRFSEAS 522
           E+LG+   PP KKQKV+ +  DQSIEQLNDVTAVSGVNLREEEEQLFSG KED R SEAS
Sbjct: 510 ETLGSSPPPPSKKQKVAGNSMDQSIEQLNDVTAVSGVNLREEEEQLFSGAKEDGRVSEAS 569

Query: 523 RR 528
           RR
Sbjct: 570 RR 571