BLASTX nr result

ID: Bupleurum21_contig00002882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002882
         (1132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP...   454   e-125
ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP...   452   e-125
ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   441   e-121
ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional ...   438   e-120
ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional ...   437   e-120

>ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
           sativus]
          Length = 404

 Score =  454 bits (1167), Expect = e-125
 Identities = 220/300 (73%), Positives = 251/300 (83%)
 Frame = -3

Query: 911 PQQASGDEIRTLWIGDLQYFMDENYLMSCFAPSGEVVSAKVIRNKSTNQSDGYGFIEFVS 732
           PQ A+GDE+RTLWIGDLQY+MDENY+ +CFA +GEV S KVIRNK T QS+GYGFIEF++
Sbjct: 57  PQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLT 116

Query: 731 RDAAERNLQTYNGTPMPNVQQNFRLNWASSGVGEKRTDDGADYTIFVGDLAADVTDYTLQ 552
           R AAER LQTYNGT MPN  QNFRLNWAS+G  EKR DD  DYTIFVGDLA DVTDY LQ
Sbjct: 117 RPAAERVLQTYNGTAMPNGAQNFRLNWASAG--EKRQDDSPDYTIFVGDLAGDVTDYVLQ 174

Query: 551 ETFRVHYPSVRGAKVVTDRETSRSKGYGFVKFADESEQLRAMTEMNGSMCSTRPMRIGPA 372
           ETFR  Y SV+GAKVV DR T R+KGYGFVKF DESEQ+RAMTEMNG  CS+RPMRIGPA
Sbjct: 175 ETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPA 234

Query: 371 TNKRSMDSQQYPKTTYQNNQGAQSEDDPNNTTIFVGGLDSSVSDEYLRQCFSTCGQVVHV 192
            NK +   QQ+ KT+YQN QGAQ+E+DPNNTTIFVG LD++V+DE+LRQ F   G++VHV
Sbjct: 235 ANKNTSGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHV 294

Query: 191 KIPVGKRCGFVQYADRASAEEALTRLNGSQLGGQSVRLSWGRTPSNKQPQVDTNQSGGAG 12
           KIPVGKRCGFVQ+ADR  AEEAL  LNG+Q+GGQ++RLSWGR+PSNKQPQ D NQ  G G
Sbjct: 295 KIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGG 354


>ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
           sativus] gi|449472157|ref|XP_004153511.1| PREDICTED:
           polyadenylate-binding protein RBP45-like [Cucumis
           sativus]
          Length = 408

 Score =  452 bits (1163), Expect = e-125
 Identities = 219/302 (72%), Positives = 251/302 (83%)
 Frame = -3

Query: 911 PQQASGDEIRTLWIGDLQYFMDENYLMSCFAPSGEVVSAKVIRNKSTNQSDGYGFIEFVS 732
           PQ A+GDE+RTLWIGDLQY+MDENY+ +CFA +GEV S KVIRNK T QS+GYGFIEF++
Sbjct: 57  PQPANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLT 116

Query: 731 RDAAERNLQTYNGTPMPNVQQNFRLNWASSGVGEKRTDDGADYTIFVGDLAADVTDYTLQ 552
           R AAER LQTYNGT MPN  QNFRLNWAS+G  EKR DD  DYTIFVGDLA DVTDY LQ
Sbjct: 117 RPAAERVLQTYNGTAMPNGAQNFRLNWASAG--EKRQDDSPDYTIFVGDLAGDVTDYVLQ 174

Query: 551 ETFRVHYPSVRGAKVVTDRETSRSKGYGFVKFADESEQLRAMTEMNGSMCSTRPMRIGPA 372
           ETFR  Y SV+GAKVV DR T R+KGYGFVKF DESEQ+RAMTEMNG  CS+RPMRIGPA
Sbjct: 175 ETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPA 234

Query: 371 TNKRSMDSQQYPKTTYQNNQGAQSEDDPNNTTIFVGGLDSSVSDEYLRQCFSTCGQVVHV 192
            NK +  SQQ+ KT+YQN  G Q+E+DPNNTTIFVG LDS+V+DE+LRQ FS  G++VHV
Sbjct: 235 ANKNTSGSQQFSKTSYQNPPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHV 294

Query: 191 KIPVGKRCGFVQYADRASAEEALTRLNGSQLGGQSVRLSWGRTPSNKQPQVDTNQSGGAG 12
           KIP GKRCGFVQ++DR+ AEEAL  LNG+ +GGQ++RLSWGR+PSNKQPQ D NQ  G G
Sbjct: 295 KIPAGKRCGFVQFSDRSCAEEALRILNGTPIGGQNIRLSWGRSPSNKQPQADPNQWNGGG 354

Query: 11  AG 6
            G
Sbjct: 355 GG 356


>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Vitis vinifera]
          Length = 417

 Score =  441 bits (1135), Expect = e-121
 Identities = 214/303 (70%), Positives = 246/303 (81%)
 Frame = -3

Query: 914 APQQASGDEIRTLWIGDLQYFMDENYLMSCFAPSGEVVSAKVIRNKSTNQSDGYGFIEFV 735
           APQ ++ +EIR+LWIGDLQ +M+ENYL  CF+ +GEVVS KVIRNK T Q +GYGFIE  
Sbjct: 80  APQASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELA 139

Query: 734 SRDAAERNLQTYNGTPMPNVQQNFRLNWASSGVGEKRTDDGADYTIFVGDLAADVTDYTL 555
           +R AAER LQTYNGT MPN +QNFRLNWA+ G GE+R DD  DYTIFVGDLA+DVTDY L
Sbjct: 140 TRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVL 199

Query: 554 QETFRVHYPSVRGAKVVTDRETSRSKGYGFVKFADESEQLRAMTEMNGSMCSTRPMRIGP 375
           QETFR HYPSV+GAKVVTDR T RSKGYGFV+F DE EQLRAM EMNG  CSTRPMRIGP
Sbjct: 200 QETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGP 259

Query: 374 ATNKRSMDSQQYPKTTYQNNQGAQSEDDPNNTTIFVGGLDSSVSDEYLRQCFSTCGQVVH 195
           A  K+ +  QQ+ K ++QN QG Q E DPNNTTIFVGGLDS+V+D+YLRQ FS  G++VH
Sbjct: 260 AATKKPVGGQQFQKASFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVH 319

Query: 194 VKIPVGKRCGFVQYADRASAEEALTRLNGSQLGGQSVRLSWGRTPSNKQPQVDTNQSGGA 15
           VKIPVGKRCGFVQ+A+RA AE+AL  LNG+QLG QS+RLSWGR+PSNKQ Q D  Q  G 
Sbjct: 320 VKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGG 379

Query: 14  GAG 6
             G
Sbjct: 380 YYG 382


>ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 397

 Score =  438 bits (1127), Expect = e-120
 Identities = 214/302 (70%), Positives = 246/302 (81%)
 Frame = -3

Query: 911 PQQASGDEIRTLWIGDLQYFMDENYLMSCFAPSGEVVSAKVIRNKSTNQSDGYGFIEFVS 732
           PQ  S DE+RTLWIGDLQY+MDENYL +C A +GEV S KVIRNK T+QS+GYGFIEF S
Sbjct: 52  PQPTSADEVRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQSEGYGFIEFTS 111

Query: 731 RDAAERNLQTYNGTPMPNVQQNFRLNWASSGVGEKRTDDGADYTIFVGDLAADVTDYTLQ 552
           R  AER LQTYNGT MPN  QNFRLNWA+   GE+R DD  D+TIFVGDLAADVTDY LQ
Sbjct: 112 RAGAERVLQTYNGTIMPNGGQNFRLNWATLSAGERRHDDSPDHTIFVGDLAADVTDYLLQ 171

Query: 551 ETFRVHYPSVRGAKVVTDRETSRSKGYGFVKFADESEQLRAMTEMNGSMCSTRPMRIGPA 372
           ETFR  YPS++GAKVV DR T R+KGYGFV+F DESEQ+RAMTEM G +CSTRPMRIGPA
Sbjct: 172 ETFRARYPSIKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTEMQGVLCSTRPMRIGPA 231

Query: 371 TNKRSMDSQQYPKTTYQNNQGAQSEDDPNNTTIFVGGLDSSVSDEYLRQCFSTCGQVVHV 192
           +NK +  +Q  PK +YQN QGAQ+E DPNNTTIFVG LD +V+D++LRQ F   G++VHV
Sbjct: 232 SNK-NPSTQSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGHYGELVHV 290

Query: 191 KIPVGKRCGFVQYADRASAEEALTRLNGSQLGGQSVRLSWGRTPSNKQPQVDTNQSGGAG 12
           KIP GKRCGFVQ+ADR+ AEEAL  LNG+ LGGQ+VRLSWGR+PSNKQ Q D NQ  G+G
Sbjct: 291 KIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQAQPDANQWNGSG 350

Query: 11  AG 6
            G
Sbjct: 351 GG 352


>ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 402

 Score =  437 bits (1124), Expect = e-120
 Identities = 213/302 (70%), Positives = 246/302 (81%)
 Frame = -3

Query: 911 PQQASGDEIRTLWIGDLQYFMDENYLMSCFAPSGEVVSAKVIRNKSTNQSDGYGFIEFVS 732
           PQ  S DE+RTLWIGDLQY+MDENYL +CFA +GE+ S KVIRNK T+QS+GYGFIEF S
Sbjct: 56  PQPTSADEVRTLWIGDLQYWMDENYLYTCFAHTGELASVKVIRNKQTSQSEGYGFIEFTS 115

Query: 731 RDAAERNLQTYNGTPMPNVQQNFRLNWASSGVGEKRTDDGADYTIFVGDLAADVTDYTLQ 552
           R  AER LQTYNGT MPN  QNFRLNWA+   GE+R DD  D+TIFVGDLAADVTDY LQ
Sbjct: 116 RAGAERVLQTYNGTIMPNGGQNFRLNWATFSAGERRHDDSPDHTIFVGDLAADVTDYLLQ 175

Query: 551 ETFRVHYPSVRGAKVVTDRETSRSKGYGFVKFADESEQLRAMTEMNGSMCSTRPMRIGPA 372
           ETFR  YPS +GAKVV DR T R+KGYGFV+F DESEQ+RAM+EM G +CSTRPMRIGPA
Sbjct: 176 ETFRARYPSAKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMSEMQGVLCSTRPMRIGPA 235

Query: 371 TNKRSMDSQQYPKTTYQNNQGAQSEDDPNNTTIFVGGLDSSVSDEYLRQCFSTCGQVVHV 192
           +NK +  +Q  PK +YQN QGAQ+E DPNNTTIFVG LD +V+D++LRQ F   G++VHV
Sbjct: 236 SNK-NPSTQSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGQYGELVHV 294

Query: 191 KIPVGKRCGFVQYADRASAEEALTRLNGSQLGGQSVRLSWGRTPSNKQPQVDTNQSGGAG 12
           KIP GKRCGFVQ+ADR+ AEEAL  LNG+ LGGQ+VRLSWGR+PSNKQ Q D NQ  G+G
Sbjct: 295 KIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQAQPDANQWNGSG 354

Query: 11  AG 6
            G
Sbjct: 355 GG 356


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