BLASTX nr result

ID: Bupleurum21_contig00002859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002859
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; ...   166   2e-39
gb|ABB87133.1| 40S ribosomal protein S3a-like [Solanum tuberosum]     159   3e-37
gb|ABB72808.1| cyc07-like protein [Solanum tuberosum]                 159   3e-37
gb|ABB55362.1| cyc07-like [Solanum tuberosum] gi|82400152|gb|ABB...   159   3e-37
gb|ABB55367.1| cyc07-like [Solanum tuberosum] gi|82400110|gb|ABB...   159   3e-37

>sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
           cyc07 gi|6714564|dbj|BAA89498.1| cyc07 [Daucus carota]
          Length = 261

 Score =  166 bits (419), Expect = 2e-39
 Identities = 84/87 (96%), Positives = 85/87 (97%)
 Frame = -1

Query: 286 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGD 107
           QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGD
Sbjct: 175 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGD 234

Query: 106 YSEDVGVKLERPAEETMVEADTEVVGA 26
           YSEDVGVKLERP EETMVE +TEVVGA
Sbjct: 235 YSEDVGVKLERPIEETMVEGETEVVGA 261


>gb|ABB87133.1| 40S ribosomal protein S3a-like [Solanum tuberosum]
          Length = 261

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/87 (90%), Positives = 84/87 (96%)
 Frame = -1

Query: 286 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGD 107
           QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNV+IRKVKILKAPKFD+GKLMEVHGD
Sbjct: 175 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGD 234

Query: 106 YSEDVGVKLERPAEETMVEADTEVVGA 26
           YSEDVGVKL+RPAEET+ EA+ EV GA
Sbjct: 235 YSEDVGVKLDRPAEETVAEAEAEVPGA 261


>gb|ABB72808.1| cyc07-like protein [Solanum tuberosum]
          Length = 260

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/87 (90%), Positives = 84/87 (96%)
 Frame = -1

Query: 286 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGD 107
           QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNV+IRKVKILKAPKFD+GKLMEVHGD
Sbjct: 174 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGD 233

Query: 106 YSEDVGVKLERPAEETMVEADTEVVGA 26
           YSEDVGVKL+RPAEET+ EA+ EV GA
Sbjct: 234 YSEDVGVKLDRPAEETVAEAEAEVPGA 260


>gb|ABB55362.1| cyc07-like [Solanum tuberosum] gi|82400152|gb|ABB72815.1|
           cyc07-like protein [Solanum tuberosum]
          Length = 261

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/87 (90%), Positives = 84/87 (96%)
 Frame = -1

Query: 286 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGD 107
           QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNV+IRKVKILKAPKFD+GKLMEVHGD
Sbjct: 175 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGD 234

Query: 106 YSEDVGVKLERPAEETMVEADTEVVGA 26
           YSEDVGVKL+RPAEET+ EA+ EV GA
Sbjct: 235 YSEDVGVKLDRPAEETVAEAEAEVPGA 261


>gb|ABB55367.1| cyc07-like [Solanum tuberosum] gi|82400110|gb|ABB72794.1|
           cyc07-like protein [Solanum tuberosum]
          Length = 261

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/87 (90%), Positives = 84/87 (96%)
 Frame = -1

Query: 286 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGD 107
           QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNV+IRKVKILKAPKFD+GKLMEVHGD
Sbjct: 175 QASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGD 234

Query: 106 YSEDVGVKLERPAEETMVEADTEVVGA 26
           YSEDVGVKL+RPAEET+ EA+ EV GA
Sbjct: 235 YSEDVGVKLDRPAEETVAEAEAEVPGA 261


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