BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002858
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; ...   340   e-112
sp|Q285L8.1|RS3A_TOBAC RecName: Full=40S ribosomal protein S3a; ...   333   e-108
gb|ABB55367.1| cyc07-like [Solanum tuberosum] gi|82400110|gb|ABB...   332   e-108
gb|ABB87133.1| 40S ribosomal protein S3a-like [Solanum tuberosum]     330   e-107
gb|ABB55362.1| cyc07-like [Solanum tuberosum] gi|82400152|gb|ABB...   329   e-107

>sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
           cyc07 gi|6714564|dbj|BAA89498.1| cyc07 [Daucus carota]
          Length = 261

 Score =  340 bits (872), Expect(2) = e-112
 Identities = 169/175 (96%), Positives = 172/175 (98%)
 Frame = +3

Query: 3   GKKGGKKKATDPFAKKDWYDIKAPNVFEQKNVGKTLVSRTQGTKIASEGLKHRVFEVSLA 182
           GKKGGKKKATDPFAKKDWYDIKAPNVF+ KNVGKTLVSRTQGTKIASEGLKHRVFEV LA
Sbjct: 12  GKKGGKKKATDPFAKKDWYDIKAPNVFQNKNVGKTLVSRTQGTKIASEGLKHRVFEVCLA 71

Query: 183 DLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTD 362
           DLQ DEDQAYRKIRLRAEDVQGKNVLTNF+GMDFTTDKLRSLVRKWQTLIEAHVDVKTTD
Sbjct: 72  DLQGDEDQAYRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTLIEAHVDVKTTD 131

Query: 363 SYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMKNQASSCDLKELVA 527
           SYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIM+NQASSCDLKELVA
Sbjct: 132 SYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVA 186



 Score = 91.3 bits (225), Expect(2) = e-112
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +1

Query: 556 IFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLERPI 687
           IFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLERPI
Sbjct: 204 IFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLERPI 247


>sp|Q285L8.1|RS3A_TOBAC RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
           cyc07 gi|76262913|gb|ABA41527.1| cyc07 [Nicotiana
           tabacum]
          Length = 261

 Score =  333 bits (853), Expect(2) = e-108
 Identities = 163/175 (93%), Positives = 171/175 (97%)
 Frame = +3

Query: 3   GKKGGKKKATDPFAKKDWYDIKAPNVFEQKNVGKTLVSRTQGTKIASEGLKHRVFEVSLA 182
           GKKGGKKKA DP+AKKDWYDIKAP+VF+ KNVGKTLV+RTQGTKIASEGLKHRVFEVSLA
Sbjct: 12  GKKGGKKKAADPYAKKDWYDIKAPSVFDIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLA 71

Query: 183 DLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTD 362
           DLQKDEDQ++RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD
Sbjct: 72  DLQKDEDQSFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTD 131

Query: 363 SYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMKNQASSCDLKELVA 527
           SYTLRMFCI FTKKR NQQKRTCYAQSSQIRQIRRKMVEIM+NQASSCDLKELVA
Sbjct: 132 SYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVA 186



 Score = 87.4 bits (215), Expect(2) = e-108
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +1

Query: 556 IFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLERP 684
           IFPLQNV+IRKVKILKAPKFDIGKLMEVHGDYSEDVGVKL+RP
Sbjct: 204 IFPLQNVYIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRP 246


>gb|ABB55367.1| cyc07-like [Solanum tuberosum] gi|82400110|gb|ABB72794.1|
           cyc07-like protein [Solanum tuberosum]
          Length = 261

 Score =  332 bits (850), Expect(2) = e-108
 Identities = 165/175 (94%), Positives = 170/175 (97%)
 Frame = +3

Query: 3   GKKGGKKKATDPFAKKDWYDIKAPNVFEQKNVGKTLVSRTQGTKIASEGLKHRVFEVSLA 182
           GKKGGKKKA DP+AKKDWYDIKAP+VFE KNVGKTLV+RTQGTKIASEGLKHRVFEVSLA
Sbjct: 12  GKKGGKKKAADPYAKKDWYDIKAPSVFEIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLA 71

Query: 183 DLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTD 362
           DLQKDEDQAYRKIRLRAEDVQG+NVLTNF GMDFTTDKLRSLVRKWQTLIEAHVDVKTTD
Sbjct: 72  DLQKDEDQAYRKIRLRAEDVQGRNVLTNFHGMDFTTDKLRSLVRKWQTLIEAHVDVKTTD 131

Query: 363 SYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMKNQASSCDLKELVA 527
           SYTLRMFCI FTKKR NQQKRTCYAQSSQIRQIRRKMVEIM+NQASSCDLKELVA
Sbjct: 132 SYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVA 186



 Score = 86.7 bits (213), Expect(2) = e-108
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +1

Query: 556 IFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLERP 684
           IFPLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVKL+RP
Sbjct: 204 IFPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLDRP 246


>gb|ABB87133.1| 40S ribosomal protein S3a-like [Solanum tuberosum]
          Length = 261

 Score =  330 bits (846), Expect(2) = e-107
 Identities = 164/175 (93%), Positives = 170/175 (97%)
 Frame = +3

Query: 3   GKKGGKKKATDPFAKKDWYDIKAPNVFEQKNVGKTLVSRTQGTKIASEGLKHRVFEVSLA 182
           GKKGGKKKA DP+AKKDWYDIKAP+VFE KNVGKTLV+RTQGTKIASEGLKHRVFEVSLA
Sbjct: 12  GKKGGKKKAADPYAKKDWYDIKAPSVFEIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLA 71

Query: 183 DLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTD 362
           DLQKDEDQA+RKIRLRAEDVQG+NVLTNF GMDFTTDKLRSLVRKWQTLIEAHVDVKTTD
Sbjct: 72  DLQKDEDQAFRKIRLRAEDVQGRNVLTNFHGMDFTTDKLRSLVRKWQTLIEAHVDVKTTD 131

Query: 363 SYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMKNQASSCDLKELVA 527
           SYTLRMFCI FTKKR NQQKRTCYAQSSQIRQIRRKMVEIM+NQASSCDLKELVA
Sbjct: 132 SYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVA 186



 Score = 86.7 bits (213), Expect(2) = e-107
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +1

Query: 556 IFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLERP 684
           IFPLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVKL+RP
Sbjct: 204 IFPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLDRP 246


>gb|ABB55362.1| cyc07-like [Solanum tuberosum] gi|82400152|gb|ABB72815.1|
           cyc07-like protein [Solanum tuberosum]
          Length = 261

 Score =  329 bits (843), Expect(2) = e-107
 Identities = 163/175 (93%), Positives = 170/175 (97%)
 Frame = +3

Query: 3   GKKGGKKKATDPFAKKDWYDIKAPNVFEQKNVGKTLVSRTQGTKIASEGLKHRVFEVSLA 182
           GKKGGKKKA DP+AKKDWYDIKAP+VFE KNVGKTLV+RTQGTKIAS+GLKHRVFEVSLA
Sbjct: 12  GKKGGKKKAADPYAKKDWYDIKAPSVFEIKNVGKTLVTRTQGTKIASDGLKHRVFEVSLA 71

Query: 183 DLQKDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTD 362
           DLQKDEDQA+RKIRLRAEDVQG+NVLTNF GMDFTTDKLRSLVRKWQTLIEAHVDVKTTD
Sbjct: 72  DLQKDEDQAFRKIRLRAEDVQGRNVLTNFHGMDFTTDKLRSLVRKWQTLIEAHVDVKTTD 131

Query: 363 SYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMKNQASSCDLKELVA 527
           SYTLRMFCI FTKKR NQQKRTCYAQSSQIRQIRRKMVEIM+NQASSCDLKELVA
Sbjct: 132 SYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVA 186



 Score = 86.7 bits (213), Expect(2) = e-107
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +1

Query: 556 IFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLERP 684
           IFPLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVKL+RP
Sbjct: 204 IFPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLDRP 246