BLASTX nr result

ID: Bupleurum21_contig00002787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002787
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38933.1| unknown [Medicago truncatula]                          103   2e-20
gb|AFK41233.1| unknown [Lotus japonicus]                              102   4e-20
gb|AFK40698.1| unknown [Lotus japonicus]                              101   1e-19
ref|XP_002313489.1| predicted protein [Populus trichocarpa] gi|1...    98   1e-18
ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258...    96   5e-18

>gb|AFK38933.1| unknown [Medicago truncatula]
          Length = 170

 Score =  103 bits (258), Expect = 2e-20
 Identities = 66/163 (40%), Positives = 91/163 (55%), Gaps = 5/163 (3%)
 Frame = +3

Query: 6   MANIH--QTIIFLLAFAVIHLSRGQVLTGSVSCLDCDPQYDYSDIVVMVKC---KQVLVT 170
           MA +H    ++F L    I LS  ++L G VSC+DC   YD SDI V VKC   K + +T
Sbjct: 1   MAYVHVITALLFALVLVRIDLSACEILQGKVSCVDCTHSYDLSDIKVTVKCEGVKNLAMT 60

Query: 171 KASKNGTFTVTLPTDMSASMPSSNCETKIFSSEKQLYVENANMVAKVITAGESDSSYGYT 350
              ++G+F V LP+D + +  S NC  K+     QLY +  N V++VI   E +S   Y 
Sbjct: 61  TTEEDGSFKVNLPSDNTKT--SMNCLAKLLGGPIQLYAKKQNQVSQVIKGKEENS---YI 115

Query: 351 IANPLSFLISCPFSKDDARCQAKKSVGTKWSKTISRRLLQSYG 479
           I+ PLSFLISCP    +  C+A K +G+  SKTI   L   +G
Sbjct: 116 ISTPLSFLISCP---QNTNCKATKPIGS--SKTIDLPLPPEWG 153


>gb|AFK41233.1| unknown [Lotus japonicus]
          Length = 172

 Score =  102 bits (255), Expect = 4e-20
 Identities = 61/158 (38%), Positives = 87/158 (55%), Gaps = 3/158 (1%)
 Frame = +3

Query: 15  IHQTIIFLLAFAVIHLSRGQVLTGSVSCLDCDPQYDYSDIVVMVKC---KQVLVTKASKN 185
           +   ++F LA A I  S  QV+ G VSC+DC   +D SDI V+VKC   K++ +     N
Sbjct: 6   VFTALLFALALARIDPSTCQVVNGKVSCVDCTQNHDLSDIKVLVKCEGVKKLALASTEDN 65

Query: 186 GTFTVTLPTDMSASMPSSNCETKIFSSEKQLYVENANMVAKVITAGESDSSYGYTIANPL 365
           G F V LP+D +    + NC  K+     QLY    N V+++I + E +S   YTI+ PL
Sbjct: 66  GFFKVDLPSDKTKPSSAGNCLAKLVGGPVQLYATRQNQVSQIIKSQEPNS---YTISTPL 122

Query: 366 SFLISCPFSKDDARCQAKKSVGTKWSKTISRRLLQSYG 479
           SF+ SCP    +  C+A K VG+  SKT+   L   +G
Sbjct: 123 SFMKSCP---QNTNCKAAKPVGS--SKTVDLPLPPEWG 155


>gb|AFK40698.1| unknown [Lotus japonicus]
          Length = 172

 Score =  101 bits (251), Expect = 1e-19
 Identities = 60/158 (37%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
 Frame = +3

Query: 15  IHQTIIFLLAFAVIHLSRGQVLTGSVSCLDCDPQYDYSDIVVMVKC---KQVLVTKASKN 185
           +   ++F L  A I  S  QV+ G VSC+DC   +D SDI V+VKC   K++ +     N
Sbjct: 6   VFTALLFALTLARIDPSTCQVVNGKVSCVDCTQNHDLSDIKVLVKCEGVKKLALASTEDN 65

Query: 186 GTFTVTLPTDMSASMPSSNCETKIFSSEKQLYVENANMVAKVITAGESDSSYGYTIANPL 365
           G F V LP+D +    + NC  K+     QLY    N V+++I + E +S   YTI+ PL
Sbjct: 66  GFFKVDLPSDKTKPSSAGNCLAKLVGGPVQLYATRQNQVSQIIKSQEPNS---YTISTPL 122

Query: 366 SFLISCPFSKDDARCQAKKSVGTKWSKTISRRLLQSYG 479
           SF+ SCP    +  C+A K VG+  SKT+   L   +G
Sbjct: 123 SFMKSCP---QNTNCKAAKPVGS--SKTVDLPLPPEWG 155


>ref|XP_002313489.1| predicted protein [Populus trichocarpa] gi|118488493|gb|ABK96060.1|
           unknown [Populus trichocarpa]
           gi|222849897|gb|EEE87444.1| predicted protein [Populus
           trichocarpa]
          Length = 173

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 62/157 (39%), Positives = 85/157 (54%), Gaps = 5/157 (3%)
 Frame = +3

Query: 24  TIIFLLAFAV--IHLSRGQVLTGSVSCLDCDPQYDYSDIVVMVKC---KQVLVTKASKNG 188
           TI+ LLA A+  I LS  QVL G VSCLDC   YDYS+I V VKC   +++  T    +G
Sbjct: 7   TIVLLLALALSGIQLSTCQVLKGKVSCLDCGGHYDYSEIKVGVKCDKVRKLATTTTQSDG 66

Query: 189 TFTVTLPTDMSASMPSSNCETKIFSSEKQLYVENANMVAKVITAGESDSSYGYTIANPLS 368
           +F V LP   S +     C  K+     QLYV   NMV+K++   +S+S   YTI+ PL+
Sbjct: 67  SFEVKLPPGTSTAATPLICLAKLLGGPSQLYVSRQNMVSKIVQTHDSNS---YTISTPLA 123

Query: 369 FLISCPFSKDDARCQAKKSVGTKWSKTISRRLLQSYG 479
           F  +C  S    +C      G+  SKT+   L + +G
Sbjct: 124 FSSTC--SAGGGKCGVSNQFGS--SKTVDLPLPREWG 156


>ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258720 [Vitis vinifera]
           gi|147828169|emb|CAN68427.1| hypothetical protein
           VITISV_031997 [Vitis vinifera]
           gi|296084887|emb|CBI28296.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
 Frame = +3

Query: 3   AMANIHQTIIFLLAFAVIHLSRGQVLTGSVSCLDCDPQYDYSDIVVMVKC---KQVLVTK 173
           A+  +   + F L  A I LS   V+ GSV+CLDC   +D+S I V+VKC   K++ +  
Sbjct: 2   ALNRVIAPLFFALVLATIDLSTCHVMKGSVTCLDCHRHHDFSGIKVLVKCDRVKKLAMAT 61

Query: 174 ASKNGTFTVTLPTDMSASMPSSNCETKIFSSEKQLYVENANMVAKVITAGESDSSYGYTI 353
              +G+F   LP+D   S P  NC  K+     QLY    N V+K++ A +  S   YTI
Sbjct: 62  TEADGSFKTNLPSDTQTSSPPLNCLAKLLGGPNQLYAFRKNTVSKIVKARDDSS---YTI 118

Query: 354 ANPLSFLISCPFSKDDAR 407
           + PLSF  +CP S   A+
Sbjct: 119 STPLSFSTTCPSSVKGAK 136


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