BLASTX nr result

ID: Bupleurum21_contig00002785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002785
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41233.1| unknown [Lotus japonicus]                               58   7e-07
gb|AFK40698.1| unknown [Lotus japonicus]                               58   7e-07
ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258...    58   9e-07
gb|AFK38933.1| unknown [Medicago truncatula]                           55   5e-06
ref|XP_002872002.1| hypothetical protein ARALYDRAFT_351266 [Arab...    55   8e-06

>gb|AFK41233.1| unknown [Lotus japonicus]
          Length = 172

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/80 (37%), Positives = 44/80 (55%)
 Frame = -3

Query: 455 NGTFTVTLPTDMSASMPSSNCATKIFSSKKQLYIENANIIAKVITGESDPYDYTISNPLS 276
           NG F V LP+D +    + NC  K+     QLY    N ++++I  + +P  YTIS PLS
Sbjct: 65  NGFFKVDLPSDKTKPSSAGNCLAKLVGGPVQLYATRQNQVSQIIKSQ-EPNSYTISTPLS 123

Query: 275 FLVSCPFSKDDVRCQAKESV 216
           F+ SCP    +  C+A + V
Sbjct: 124 FMKSCP---QNTNCKAAKPV 140


>gb|AFK40698.1| unknown [Lotus japonicus]
          Length = 172

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/80 (37%), Positives = 44/80 (55%)
 Frame = -3

Query: 455 NGTFTVTLPTDMSASMPSSNCATKIFSSKKQLYIENANIIAKVITGESDPYDYTISNPLS 276
           NG F V LP+D +    + NC  K+     QLY    N ++++I  + +P  YTIS PLS
Sbjct: 65  NGFFKVDLPSDKTKPSSAGNCLAKLVGGPVQLYATRQNQVSQIIKSQ-EPNSYTISTPLS 123

Query: 275 FLVSCPFSKDDVRCQAKESV 216
           F+ SCP    +  C+A + V
Sbjct: 124 FMKSCP---QNTNCKAAKPV 140


>ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258720 [Vitis vinifera]
           gi|147828169|emb|CAN68427.1| hypothetical protein
           VITISV_031997 [Vitis vinifera]
           gi|296084887|emb|CBI28296.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/68 (39%), Positives = 36/68 (52%)
 Frame = -3

Query: 455 NGTFTVTLPTDMSASMPSSNCATKIFSSKKQLYIENANIIAKVITGESDPYDYTISNPLS 276
           +G+F   LP+D   S P  NC  K+     QLY    N ++K++    D   YTIS PLS
Sbjct: 65  DGSFKTNLPSDTQTSSPPLNCLAKLLGGPNQLYAFRKNTVSKIVKARDDS-SYTISTPLS 123

Query: 275 FLVSCPFS 252
           F  +CP S
Sbjct: 124 FSTTCPSS 131


>gb|AFK38933.1| unknown [Medicago truncatula]
          Length = 170

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/81 (37%), Positives = 48/81 (59%)
 Frame = -3

Query: 458 KNGTFTVTLPTDMSASMPSSNCATKIFSSKKQLYIENANIIAKVITGESDPYDYTISNPL 279
           ++G+F V LP+D + +  S NC  K+     QLY +  N +++VI G+ +   Y IS PL
Sbjct: 64  EDGSFKVNLPSDNTKT--SMNCLAKLLGGPIQLYAKKQNQVSQVIKGKEEN-SYIISTPL 120

Query: 278 SFLVSCPFSKDDVRCQAKESV 216
           SFL+SCP    +  C+A + +
Sbjct: 121 SFLISCP---QNTNCKATKPI 138


>ref|XP_002872002.1| hypothetical protein ARALYDRAFT_351266 [Arabidopsis lyrata subsp.
           lyrata] gi|297317839|gb|EFH48261.1| hypothetical protein
           ARALYDRAFT_351266 [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = -3

Query: 464 ASKNGTFTVTLPTDMSASMPSSNCATKIFSSKKQLYIENANIIAKVITGESDPYDYTISN 285
           A+ +G+F   LPT  +    S NC  K+    +QLY    N++++++  + D    TISN
Sbjct: 64  AASDGSFRSVLPT--ADKKGSENCLAKLLGGPEQLYAHKHNLVSELVNSKHDSKVLTISN 121

Query: 284 PLSFLVSCPF-SKDDVRCQAKESVNI 210
           PL+F +SCP  ++DDV     +S  I
Sbjct: 122 PLAFSLSCPKPTQDDVGSMIGDSKTI 147


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