BLASTX nr result
ID: Bupleurum21_contig00002777
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00002777
(2582 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containi... 590 e-166
emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera] 587 e-165
ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containi... 541 e-151
ref|XP_002305302.1| predicted protein [Populus trichocarpa] gi|2... 529 e-147
ref|XP_002329308.1| predicted protein [Populus trichocarpa] gi|2... 527 e-147
>ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 590 bits (1522), Expect = e-166
Identities = 299/506 (59%), Positives = 377/506 (74%), Gaps = 5/506 (0%)
Frame = -2
Query: 1606 RSELSNPNCRCYNHMLGILGANGFVKEFWELVGVMKNKGYEXXXXXXXXXXXRFEKDGLS 1427
R+E + + YN MLGILG+NGFV EFW+LV VMK KGY FEK+ L
Sbjct: 138 RAESERLSSKSYNLMLGILGSNGFVSEFWDLVEVMKKKGYGVSKAAYVKALENFEKEALG 197
Query: 1426 GDLEKLNELFASGSTDNSIEKICLRVSKVFQKNVWGDDVEKKL--MDVSYSSDLVAMVLE 1253
DLEKL LFASGS D+SI+KIC RVSK+ + VWGD+VE +L + V++S DLVAMVLE
Sbjct: 198 SDLEKLRGLFASGSVDDSIQKICSRVSKIIRSEVWGDNVEGQLHNLKVTFSGDLVAMVLE 257
Query: 1252 KLGSDPNKGLIFFRWIEDSDLFKHDECTYNVMARVLGRQGYTDKFFRVVGEMRGAGYEMT 1073
LG +P K LIFFRW+E+SDL KHD+ TYN M RVLGR+ ++F++V EMR AGYEM
Sbjct: 258 NLGLEPMKALIFFRWVEESDLVKHDKQTYNAMLRVLGREDCIERFWKVADEMRNAGYEME 317
Query: 1072 TETYVHVFNQLIKKKLIKDVVDLYEFAMGGVNKPSVRDCTFLLRKIIVNDKHDMDLFQRV 893
TY V + K+K+IK+VVDLYEFAM G NKPS+ DCTFLLRKI+V+ D+ LF RV
Sbjct: 318 VATYFKVVGRFYKRKMIKEVVDLYEFAMSGANKPSMYDCTFLLRKIVVSKVLDISLFSRV 377
Query: 892 IKIYKDSGNVLTSSNLETVLKSVTS---FEECNKILKAVKEGGLSLSDDLQSKIAFRLSS 722
++ Y + GN+LT S L+ +LKS+TS F ECNK+LKA++EGG + +Q+KIAF LSS
Sbjct: 378 VRTYTEGGNILTKSMLDAILKSLTSVGRFGECNKLLKAMEEGGYVVGSGMQNKIAFGLSS 437
Query: 721 EGEKDEAIEFIDSIETYGGGPNHKTWVSLIEGYYVAGHLNKASDCIRKMIEKEGPSSAGY 542
+ DEA EF++++E PN++TW SLIEGY VAG L+KASDC +KM+EKEG S AGY
Sbjct: 438 ARKTDEANEFMNNMEDSDCRPNYRTWSSLIEGYCVAGDLDKASDCFQKMVEKEGVSYAGY 497
Query: 541 PFEVLVTAYCSKNKARDAFELLLVLVRDKELKPRHTTYKTLTRKLLVQGHFKEALHLLGL 362
FEVLV AYC K ++ DA LL L ++ KP H+TYK L KLLVQG F+ AL+LLGL
Sbjct: 498 AFEVLVNAYCCKGRSVDACGLLCDLASKEKFKPWHSTYKLLISKLLVQGGFQAALNLLGL 557
Query: 361 MKTQGFPPFLDPFIEYVSKSGTADDAILLLQSMTVKRFPATSVYLRVFEAYFKVGKHDEA 182
MK FPPFLDPFIEYVS++GT DDAI L++MTVKRFP+TSV+L+ FEA+FK G+H+EA
Sbjct: 558 MKDHEFPPFLDPFIEYVSRTGTGDDAITFLRAMTVKRFPSTSVFLQTFEAFFKAGRHNEA 617
Query: 181 QNFLSKCPRFIRNNADVLNLFFTKRA 104
Q+FLSKCP +IRN+ADVLNLF+T ++
Sbjct: 618 QDFLSKCPGYIRNHADVLNLFYTMKS 643
>emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]
Length = 650
Score = 587 bits (1514), Expect = e-165
Identities = 298/506 (58%), Positives = 374/506 (73%), Gaps = 5/506 (0%)
Frame = -2
Query: 1606 RSELSNPNCRCYNHMLGILGANGFVKEFWELVGVMKNKGYEXXXXXXXXXXXRFEKDGLS 1427
R+E + + YN MLGILG+NGFV EFW+LV VMK KGY FEK+ L
Sbjct: 138 RAESERLSSKSYNLMLGILGSNGFVSEFWDLVEVMKKKGYGVSKAAYVKALENFEKEALG 197
Query: 1426 GDLEKLNELFASGSTDNSIEKICLRVSKVFQKNVWGDDVEKKL--MDVSYSSDLVAMVLE 1253
DLEKL LFASGS DNSI+KIC RVSK+ + VWGD+VE +L + V++S DLVAMVLE
Sbjct: 198 SDLEKLRGLFASGSVDNSIQKICSRVSKIIRSEVWGDNVEGQLHNLKVTFSGDLVAMVLE 257
Query: 1252 KLGSDPNKGLIFFRWIEDSDLFKHDECTYNVMARVLGRQGYTDKFFRVVGEMRGAGYEMT 1073
LG +P K LIFFRW+E+SDL KHD+ TYN M RVLGR+ ++F++V EMR AGYEM
Sbjct: 258 NLGLEPMKALIFFRWVEESDLXKHDKXTYNAMLRVLGREDCIERFWKVADEMRNAGYEME 317
Query: 1072 TETYVHVFNQLIKKKLIKDVVDLYEFAMGGVNKPSVRDCTFLLRKIIVNDKHDMDLFQRV 893
TY V + K+K+I +VVDLYEFAM G NKPS+ DCTFLLRKI+V+ D+ LF RV
Sbjct: 318 VATYXKVVGRFYKRKMIXEVVDLYEFAMSGANKPSMYDCTFLLRKIVVSKVLDISLFSRV 377
Query: 892 IKIYKDSGNVLTSSNLETVLKSVTS---FEECNKILKAVKEGGLSLSDDLQSKIAFRLSS 722
++ Y + GN+LT S L+ LKS+TS F ECNK+LKA++EGG + +Q+KIAF LSS
Sbjct: 378 VRTYTEGGNILTKSMLDAXLKSLTSVGRFGECNKLLKAMEEGGYVVGSGMQNKIAFGLSS 437
Query: 721 EGEKDEAIEFIDSIETYGGGPNHKTWVSLIEGYYVAGHLNKASDCIRKMIEKEGPSSAGY 542
+ DEA EF++++E PN++TW SLIEGY VAG L+KASDC +KM+EKEG S GY
Sbjct: 438 ARKTDEANEFMNNMEDSDCRPNYRTWSSLIEGYCVAGDLDKASDCFQKMVEKEGVSYXGY 497
Query: 541 PFEVLVTAYCSKNKARDAFELLLVLVRDKELKPRHTTYKTLTRKLLVQGHFKEALHLLGL 362
FEVLV AYC K ++ DA LL L ++ KP H+TYK L KLLVQG F+ AL+LLGL
Sbjct: 498 AFEVLVNAYCCKGRSVDACGLLCDLASKEKFKPWHSTYKLLISKLLVQGGFQAALNLLGL 557
Query: 361 MKTQGFPPFLDPFIEYVSKSGTADDAILLLQSMTVKRFPATSVYLRVFEAYFKVGKHDEA 182
MK FPPFLDPFIEYVS++GT DDAI L++MTVKRFP+TSV+L+ FEA+FK G+H+EA
Sbjct: 558 MKDHEFPPFLDPFIEYVSRTGTGDDAITFLRAMTVKRFPSTSVFLQTFEAFFKAGRHNEA 617
Query: 181 QNFLSKCPRFIRNNADVLNLFFTKRA 104
Q+FLSKCP +IRN+ADVLNLF+T ++
Sbjct: 618 QDFLSKCPGYIRNHADVLNLFYTMKS 643
>ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Glycine max]
Length = 629
Score = 541 bits (1393), Expect = e-151
Identities = 275/515 (53%), Positives = 364/515 (70%), Gaps = 5/515 (0%)
Frame = -2
Query: 1648 KRCLQWKPKRVSLSRSELSNPNCRCYNHMLGILGANGFVKEFWELVGVMKNKGYEXXXXX 1469
+R QW +S + + +CYN ML +LG NGFV EFW+LV VMK KGY
Sbjct: 110 RRFFQW------VSENHPERLSSKCYNSMLCVLGTNGFVDEFWDLVNVMKKKGYGVSKGV 163
Query: 1468 XXXXXXRFEKDGLSGDLEKLNELFASGSTDNSIEKICLRVSKVFQKNVWGDDVEKKLMD- 1292
FEK G+ GD+ KL LF DNS EK V ++ + NVWGDDVEK++ D
Sbjct: 164 KERVLESFEKGGMDGDVAKLKGLF-----DNSKEKNIAIVCRIVRNNVWGDDVEKQIEDL 218
Query: 1291 -VSYSSDLVAMVLEKLGSDPNKGLIFFRWIEDSDLFKHDECTYNVMARVLGRQGYTDKFF 1115
V +SS++V VLE L +P K LIFFRW+E+S LFKHD TYN MARVLGR+ D+F+
Sbjct: 219 NVGFSSEVVKTVLESLVLEPVKALIFFRWLEESGLFKHDGRTYNAMARVLGREDLIDRFW 278
Query: 1114 RVVGEMRGAGYEMTTETYVHVFNQLIKKKLIKDVVDLYEFAMGGVNKPSVRDCTFLLRKI 935
++VG+MR AG+EM ET+V V + K++++KD V+LYEFAM G NKP+V+ C FLLRK+
Sbjct: 279 KLVGDMRSAGFEMEAETFVKVLGRFCKRRMVKDAVELYEFAMAGANKPTVQCCVFLLRKV 338
Query: 934 IVNDKHDMDLFQRVIKIYKDSGNVLTSSNLETVLKSVTSFE---ECNKILKAVKEGGLSL 764
+ D DLF RV+K++ +GNVLT S VLKS+TS E NK+LK +++ G
Sbjct: 339 AAGKELDTDLFSRVLKVFTGNGNVLTDSVANAVLKSLTSVGRTGEWNKVLKEMEDCGFVA 398
Query: 763 SDDLQSKIAFRLSSEGEKDEAIEFIDSIETYGGGPNHKTWVSLIEGYYVAGHLNKASDCI 584
LQSKIA+RL + G K++A EF++ IE G P KTW SLI+GY VAG+L+KA +
Sbjct: 399 GGSLQSKIAYRLGAAGNKEQAHEFMNRIEVSGSNPYRKTWESLIQGYCVAGNLDKAFESF 458
Query: 583 RKMIEKEGPSSAGYPFEVLVTAYCSKNKARDAFELLLVLVRDKELKPRHTTYKTLTRKLL 404
++++EKEG +SAGY F VL+ +YC N+A DA ++L LV +K+LKP H+TYK L KLL
Sbjct: 459 KEIVEKEGVASAGYSFNVLMNSYCQMNRAVDASKILCRLVNEKQLKPWHSTYKLLVTKLL 518
Query: 403 VQGHFKEALHLLGLMKTQGFPPFLDPFIEYVSKSGTADDAILLLQSMTVKRFPATSVYLR 224
VQG F +AL++LGLM+T GFPPF DPFIE++SKSG+ DDA+L L++MT KRFP+TS++LR
Sbjct: 519 VQGGFTDALNILGLMRTHGFPPFTDPFIEHLSKSGSGDDAVLFLKAMTSKRFPSTSMFLR 578
Query: 223 VFEAYFKVGKHDEAQNFLSKCPRFIRNNADVLNLF 119
+FEA+FK +H+EAQNFLSKCPR+IRN+ADVLNLF
Sbjct: 579 MFEAFFKHRRHEEAQNFLSKCPRYIRNHADVLNLF 613
>ref|XP_002305302.1| predicted protein [Populus trichocarpa] gi|222848266|gb|EEE85813.1|
predicted protein [Populus trichocarpa]
Length = 616
Score = 529 bits (1363), Expect = e-147
Identities = 271/496 (54%), Positives = 354/496 (71%), Gaps = 5/496 (1%)
Frame = -2
Query: 1579 RCYNHMLGILGANGFVKEFWELVGVMKNKGYEXXXXXXXXXXXRFEKDGLSGDLEKLNEL 1400
+ YN MLGILG NG V EFW+LV MK KG+ +FEK+GL+ DLEKL +
Sbjct: 121 KSYNWMLGILGVNGLVVEFWDLVDKMKIKGHGVSGVTRDRVQEKFEKEGLNDDLEKLKGV 180
Query: 1399 FASGSTDNSIEKICLRVSKVFQKNVWGDDVEKKLMDV--SYSSDLVAMVLEKLGSDPNKG 1226
FA GS DNS+EKI LRVS++ + VWG+DVE ++ + +SSDLV +VLE L +P K
Sbjct: 181 FAKGSVDNSVEKIGLRVSRIVRNKVWGEDVEGEIKHLCAEFSSDLVKIVLEHLVMEPVKA 240
Query: 1225 LIFFRWIEDSDLFKHDECTYNVMARVLGRQGYTDKFFRVVGEMRGAGYEMTTETYVHVFN 1046
LIFFRW+EDS+L KHD +YN MARVLGR+ D+F++V+ EMR G+EM T T+ V
Sbjct: 241 LIFFRWVEDSELCKHDGRSYNAMARVLGREDCIDRFWKVIDEMRSNGFEMETGTFDTVLA 300
Query: 1045 QLIKKKLIKDVVDLYEFAMGGVNKPSVRDCTFLLRKIIVNDKHDMDLFQRVIKIYKDSGN 866
+ + +K+IK+ +DLYEFAM G NKPS + CT+LLRKI+V + DM LF RV++I+ GN
Sbjct: 301 RFMSRKMIKEAIDLYEFAMTGANKPSAKCCTYLLRKIVVGKQLDMGLFSRVVEIFTGHGN 360
Query: 865 VLTSSNLETVLKSVTS---FEECNKILKAVKEGGLSLSDDLQSKIAFRLSSEGEKDEAIE 695
VLT + L+ VLK++T+ F ECNK+L+ +K G S +LQ KIAF L+S G+ DEA E
Sbjct: 361 VLTDAMLDAVLKALTNVGKFGECNKVLREMKVAGFVASGNLQRKIAFGLTSAGKNDEANE 420
Query: 694 FIDSIETYGGGPNHKTWVSLIEGYYVAGHLNKASDCIRKMIEKEGPSSAGYPFEVLVTAY 515
F++ +E+ G ++K W SLIEG+ V+G L KASDC + M+EK+G S AGY E+LV AY
Sbjct: 421 FVNHMESSGRDLSYKAWASLIEGHCVSGDLEKASDCFKIMVEKKGVSGAGYAVELLVNAY 480
Query: 514 CSKNKARDAFELLLVLVRDKELKPRHTTYKTLTRKLLVQGHFKEALHLLGLMKTQGFPPF 335
C KN+A DA LL V L P TTYK L KLLVQG FK+AL+LLGLM++ G PPF
Sbjct: 481 CLKNRAMDACNLLCDYVCQNHLCPWQTTYKVLISKLLVQGAFKDALNLLGLMQSHGIPPF 540
Query: 334 LDPFIEYVSKSGTADDAILLLQSMTVKRFPATSVYLRVFEAYFKVGKHDEAQNFLSKCPR 155
+DPF E+VSKSGT DDAI + +MT K+FP+ SV LR+F+A+FK +H EAQ+FLSKCP
Sbjct: 541 IDPFFEFVSKSGTGDDAIAFMNAMTTKKFPSISVALRMFKAFFKAKRHGEAQDFLSKCPI 600
Query: 154 FIRNNADVLNLFFTKR 107
+IRN ADVLNLF +K+
Sbjct: 601 YIRNRADVLNLFCSKK 616
>ref|XP_002329308.1| predicted protein [Populus trichocarpa] gi|222870762|gb|EEF07893.1|
predicted protein [Populus trichocarpa]
Length = 658
Score = 527 bits (1358), Expect = e-147
Identities = 273/522 (52%), Positives = 361/522 (69%), Gaps = 5/522 (0%)
Frame = -2
Query: 1648 KRCLQWKPKRVSLSRSELSNPNCRCYNHMLGILGANGFVKEFWELVGVMKNKGYEXXXXX 1469
KR W K+ S S S YN MLGILG NG V EFWELV MK KGY
Sbjct: 134 KRFFDWVLKKDSERLSSKS------YNWMLGILGVNGLVAEFWELVDKMKTKGYGVSGVT 187
Query: 1468 XXXXXXRFEKDGLSGDLEKLNELFASGSTDNSIEKICLRVSKVFQKNVWGDDVEKKLMDV 1289
+FE +GL GD+EKL +FA+GS DNS+EKI LR+S++ + WG+DVE ++ +
Sbjct: 188 RDRVLEKFENEGLKGDIEKLKGVFATGSIDNSVEKIGLRMSRIVRSKFWGEDVEGEIKGL 247
Query: 1288 S--YSSDLVAMVLEKLGSDPNKGLIFFRWIEDSDLFKHDECTYNVMARVLGRQGYTDKFF 1115
S +SS LV +VLE L +P K LIFFRW+E+S+L KHD +YN MARVLG + D+F+
Sbjct: 248 SAEFSSGLVKIVLEHLAIEPMKALIFFRWVEESELCKHDGGSYNAMARVLGSKDCIDRFW 307
Query: 1114 RVVGEMRGAGYEMTTETYVHVFNQLIKKKLIKDVVDLYEFAMGGVNKPSVRDCTFLLRKI 935
+V+ EMR G+EM ET+ V +++K+IK+ VDLYEFAM G NKPS + CT+LLR I
Sbjct: 308 KVIDEMRSNGFEMEVETFDTVLAWFMRRKMIKEAVDLYEFAMNGANKPSSKYCTYLLRNI 367
Query: 934 IVNDKHDMDLFQRVIKIYKDSGNVLTSSNLETVLKSVTS---FEECNKILKAVKEGGLSL 764
+V + D+ LF R++K++ ++GNVLT S L+ VLK++ S F+ECNKIL+ + G
Sbjct: 368 VVCKQLDIGLFSRIVKVFTENGNVLTDSMLDAVLKALRSVGRFKECNKILREMMVAGFVA 427
Query: 763 SDDLQSKIAFRLSSEGEKDEAIEFIDSIETYGGGPNHKTWVSLIEGYYVAGHLNKASDCI 584
S +LQ KIAF L+S G+ EAIEF+D +E+ G ++K W SLIEG+ V+G L KASDC
Sbjct: 428 SGNLQRKIAFGLTSAGKNYEAIEFVDHMESSGSDLDNKAWASLIEGHCVSGDLEKASDCF 487
Query: 583 RKMIEKEGPSSAGYPFEVLVTAYCSKNKARDAFELLLVLVRDKELKPRHTTYKTLTRKLL 404
+KM+EK+G + AGY E+LV AYC KN+A DA LL V +L P TTYK L KLL
Sbjct: 488 KKMVEKKGVTGAGYAVELLVNAYCLKNRAGDACNLLCDYVCQNQLHPWRTTYKVLISKLL 547
Query: 403 VQGHFKEALHLLGLMKTQGFPPFLDPFIEYVSKSGTADDAILLLQSMTVKRFPATSVYLR 224
QG FK+AL+LLGLM++ G PP++DPF E+VSKSGT DDAI + +MT K+FP+ SV LR
Sbjct: 548 AQGGFKDALNLLGLMQSHGIPPYIDPFFEFVSKSGTGDDAIAFMNAMTTKKFPSISVSLR 607
Query: 223 VFEAYFKVGKHDEAQNFLSKCPRFIRNNADVLNLFFTKRASR 98
+FEA+F +H EAQ+FLSKCP FIRN+ADVL LF + ++S+
Sbjct: 608 LFEAFFNAKRHSEAQDFLSKCPVFIRNHADVLTLFCSMKSSK 649
Score = 59.3 bits (142), Expect = 5e-06
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Frame = -2
Query: 1447 FEKDGLSGDLEKLNELFASG-STDNSIEK------ICLRVSKVFQKNVWGDDVEKKL--M 1295
F K ++ N LFA S++ S+ + + L V VF K DD+ K+L
Sbjct: 51 FSKTPQKHNIYNKNPLFARNLSSEASLVEPTKDPDLVLLVCDVFTKFDDSDDINKELELS 110
Query: 1294 DVSYSSDLVAMVLEKLGSDPNKGLIFFRWIEDSDLFKHDECTYNVMARVLGRQGYTDKFF 1115
V S DLV VL+ LGS P FF W+ D + +YN M +LG G +F+
Sbjct: 111 SVVISHDLVLKVLKSLGSKPGVAKRFFDWVLKKDSERLSSKSYNWMLGILGVNGLVAEFW 170
Query: 1114 RVVGEMRGAGYEMTTETYVHVFNQLIKKKLIKDVVDLY-EFAMGGVN 977
+V +M+ GY ++ T V + + L D+ L FA G ++
Sbjct: 171 ELVDKMKTKGYGVSGVTRDRVLEKFENEGLKGDIEKLKGVFATGSID 217