BLASTX nr result

ID: Bupleurum21_contig00002765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002765
         (1597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635632.1| PREDICTED: U-box domain-containing protein 4...   475   e-140
ref|XP_003534872.1| PREDICTED: U-box domain-containing protein 2...   467   e-136
ref|XP_004134799.1| PREDICTED: U-box domain-containing protein 4...   472   e-130
ref|XP_003546191.1| PREDICTED: U-box domain-containing protein 4...   468   e-129
ref|XP_003594249.1| U-box domain-containing protein [Medicago tr...   466   e-128

>ref|XP_003635632.1| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
            gi|147866196|emb|CAN79837.1| hypothetical protein
            VITISV_007520 [Vitis vinifera]
          Length = 452

 Score =  475 bits (1222), Expect(2) = e-140
 Identities = 262/407 (64%), Positives = 305/407 (74%), Gaps = 3/407 (0%)
 Frame = -3

Query: 1595 SVADSHSSMXXXXXXXXXXXXXXXXXSKIQRPLGRSMRTIRSTLYQSDEQSFNSEPGSPR 1416
            S+ +SHS+                   KIQR LGRSMRTIRS LYQ+D     ++    +
Sbjct: 3    SLEESHSNSNVLASSRTLYNTSSTSSIKIQRSLGRSMRTIRSNLYQTDRSCSFAD----K 58

Query: 1415 STYVSENLTDSVMDLRLGELATKPXXXXXXXXXXXXXXXXXSQAFSDFSACSSDISGELQ 1236
            S+ VSENLTDSV+D+RLGELA++                    AFSDFSACSSDISGELQ
Sbjct: 59   SSCVSENLTDSVIDMRLGELASRSNKSAQSPSQDEEYLDLS-HAFSDFSACSSDISGELQ 117

Query: 1235 RLATLPSPETPGL---TDPVREPEPCQGFLQRDNFSTEIIESISPEDLLPTVKLCIDGLN 1065
            RLA+LP  E       +DP  EPEPC GFLQR+NFSTEIIESISPEDL PTVK+C+DGL 
Sbjct: 118  RLASLPPSEDVAKNESSDP--EPEPCLGFLQRENFSTEIIESISPEDLQPTVKMCVDGLQ 175

Query: 1064 STSIXXXXXXXXXXXXXXXXRSDNRALIGESGAIPALISLLHSSDPWTQEHAVTAILNLS 885
            S S+                R+DNRALIGESGA+PALI LL  +DPWTQEHAVTA+LNLS
Sbjct: 176  SPSVAVKRSAAAKLRLLAKNRADNRALIGESGAVPALIPLLRCTDPWTQEHAVTALLNLS 235

Query: 884  LLEENKTLITKHGAIKPLIYVLKTGTETSKQNAACALLNLSFLDENKVSVGASGAIPPLV 705
            L EENKTLIT  GAIK L+YVLKTGTETSKQNAACALLNLS +D+NK+S+GA GAIPPLV
Sbjct: 236  LHEENKTLITNAGAIKSLVYVLKTGTETSKQNAACALLNLSLIDDNKISIGACGAIPPLV 295

Query: 704  ALLKNGSSRGKKDAITTLYKICSVKVNKERVVAAGAVKPLVEMVAEQGSGMAEKAMVVLS 525
            +LL NGS+RGKKDA+TTLYK+CS+K NKER V+AGAVK LVE+VAEQG+G+AEKAMV+LS
Sbjct: 296  SLLLNGSNRGKKDALTTLYKLCSMKQNKERAVSAGAVKLLVELVAEQGTGLAEKAMVILS 355

Query: 524  SLAGTDVGKTEIVEEGGIPALVEAIEDGSMKGKEFAVVTLLQLCSEN 384
            SLA    G+T IVEEGGIPALVEAIEDGS+KGKEFAV+TLL LC+++
Sbjct: 356  SLAAIPEGRTAIVEEGGIPALVEAIEDGSVKGKEFAVLTLLLLCADS 402



 Score = 52.0 bits (123), Expect(2) = e-140
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -2

Query: 264 AKAKHKAETLLGYLREPRQEASSSSP 187
           A+AKHKAETLLGYLREPRQEAS+SSP
Sbjct: 427 ARAKHKAETLLGYLREPRQEASTSSP 452


>ref|XP_003534872.1| PREDICTED: U-box domain-containing protein 2-like [Glycine max]
          Length = 458

 Score =  467 bits (1202), Expect(2) = e-136
 Identities = 257/381 (67%), Positives = 295/381 (77%), Gaps = 4/381 (1%)
 Frame = -3

Query: 1514 KIQRPLGRSMRTIRSTLYQSDEQSFNSEPGSPRSTYVSENLTDSVMDLRLGELATKPXXX 1335
            K QR +GRSMRTIRS+ +Q D  S +    + +ST +SENLTDSV+DLRLGELA +    
Sbjct: 29   KTQRHIGRSMRTIRSSFFQDDNSS-SCCSFTEKSTCLSENLTDSVVDLRLGELALR-NSK 86

Query: 1334 XXXXXXXXXXXXXXSQAFSDFSACSSDISGELQRLATLPSPETPGLTD----PVREPEPC 1167
                          SQAFSDFSACSSDISGELQRLATLPSP+   ++     P  E EPC
Sbjct: 87   SVKSSPAEEDLLDLSQAFSDFSACSSDISGELQRLATLPSPKKSDVSGDNEAPELEIEPC 146

Query: 1166 QGFLQRDNFSTEIIESISPEDLLPTVKLCIDGLNSTSIXXXXXXXXXXXXXXXXRSDNRA 987
             GFLQR+NFSTEIIESISPEDL PTVK+CIDGL S S+                R+DNR 
Sbjct: 147  MGFLQRENFSTEIIESISPEDLQPTVKMCIDGLQSQSVAVKRSAAAKLRLLAKNRADNRV 206

Query: 986  LIGESGAIPALISLLHSSDPWTQEHAVTAILNLSLLEENKTLITKHGAIKPLIYVLKTGT 807
            LI ESGA+P L+ LL  SDPWTQEHAVTA+LNLSL E+NK LIT  GA+K LIYVLKTGT
Sbjct: 207  LIAESGAVPVLVPLLRCSDPWTQEHAVTALLNLSLHEDNKMLITNAGAVKSLIYVLKTGT 266

Query: 806  ETSKQNAACALLNLSFLDENKVSVGASGAIPPLVALLKNGSSRGKKDAITTLYKICSVKV 627
            ETSKQNAACALL+L+ ++ENK S+GASGAIPPLV+LL NGSSRGKKDA+TTLYK+CSV+ 
Sbjct: 267  ETSKQNAACALLSLALVEENKGSIGASGAIPPLVSLLLNGSSRGKKDALTTLYKLCSVRQ 326

Query: 626  NKERVVAAGAVKPLVEMVAEQGSGMAEKAMVVLSSLAGTDVGKTEIVEEGGIPALVEAIE 447
            NKER V+AGAVKPLVE+VAEQG+GMAEKAMVVL+SLAG   GK  IVEEGGI ALVEAIE
Sbjct: 327  NKERAVSAGAVKPLVELVAEQGNGMAEKAMVVLNSLAGIQEGKDAIVEEGGIAALVEAIE 386

Query: 446  DGSMKGKEFAVVTLLQLCSEN 384
            DGS+KGKEFAV+TLLQLC ++
Sbjct: 387  DGSVKGKEFAVLTLLQLCVDS 407



 Score = 45.1 bits (105), Expect(2) = e-136
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = -2

Query: 264 AKAKHKAETLLGYLREPRQEASSSS 190
           A+AKHKAETLL YLREPRQEA+S+S
Sbjct: 432 ARAKHKAETLLRYLREPRQEAASTS 456



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
 Frame = -3

Query: 998 DNRALIGESGAIPALISLLHSSDPWTQEHAVTAILNLSLLEENKTLITKHGAIKPLIYVL 819
           +N+  IG SGAIP L+SLL +     ++ A+T +  L  + +NK      GA+KPL+ ++
Sbjct: 285 ENKGSIGASGAIPPLVSLLLNGSSRGKKDALTTLYKLCSVRQNKERAVSAGAVKPLVELV 344

Query: 818 KTGTETSKQNAACALLNLSFLDENKVSVGASGAIPPLVALLKNGSSRGKKDAITTLYKIC 639
                   + A   L +L+ + E K ++   G I  LV  +++GS +GK+ A+ TL ++C
Sbjct: 345 AEQGNGMAEKAMVVLNSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLC 404

Query: 638 -SVKVNKERVVAAGAVKPLVEMVAEQGSGMAE-KAMVVLSSL 519
               +N+  +V  G + PLV + ++ GS  A+ KA  +L  L
Sbjct: 405 VDSVINRGFLVREGGIPPLVAL-SQTGSARAKHKAETLLRYL 445


>ref|XP_004134799.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
            gi|449524460|ref|XP_004169241.1| PREDICTED: U-box
            domain-containing protein 4-like [Cucumis sativus]
          Length = 459

 Score =  472 bits (1214), Expect = e-130
 Identities = 261/408 (63%), Positives = 298/408 (73%), Gaps = 4/408 (0%)
 Frame = -3

Query: 1595 SVADSHSSMXXXXXXXXXXXXXXXXXSKIQRPLGRSMRTIRSTLYQSDEQSFNSEPGSPR 1416
            S+ DSHS+                  SKI R +GRSMRTIRS  +Q D     +   + +
Sbjct: 3    SLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVAAK 62

Query: 1415 STYVSENLTDSVMDLRLGELATKPXXXXXXXXXXXXXXXXXSQAFSDFSACSSDISGELQ 1236
            S  VSENLTDSV+DLRLGELA++                  S AFSDFSACSSDISGELQ
Sbjct: 63   SGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGELQ 122

Query: 1235 RLATLPS----PETPGLTDPVREPEPCQGFLQRDNFSTEIIESISPEDLLPTVKLCIDGL 1068
            RLA+LPS    P+  G  D   EPEPC GFLQR+NFSTEIIESISPEDL PTVK+CIDGL
Sbjct: 123  RLASLPSMAVVPQREG-EDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDGL 181

Query: 1067 NSTSIXXXXXXXXXXXXXXXXRSDNRALIGESGAIPALISLLHSSDPWTQEHAVTAILNL 888
             S+SI                RSDNR LIGESGA+PALI LL S+DPWTQEHAVTA+LNL
Sbjct: 182  QSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLNL 241

Query: 887  SLLEENKTLITKHGAIKPLIYVLKTGTETSKQNAACALLNLSFLDENKVSVGASGAIPPL 708
            SL E NK +IT  GA+K L+Y LKTGTETSKQNAACAL++L+ L+ENK S+G  GAIPPL
Sbjct: 242  SLHESNKVIITNAGAVKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIPPL 301

Query: 707  VALLKNGSSRGKKDAITTLYKICSVKVNKERVVAAGAVKPLVEMVAEQGSGMAEKAMVVL 528
            V+LL NGS+RGKKDA+TTLYK+CS+K NKER V AGAVKPLV +VAEQG+G+AEKAMVVL
Sbjct: 302  VSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMVVL 361

Query: 527  SSLAGTDVGKTEIVEEGGIPALVEAIEDGSMKGKEFAVVTLLQLCSEN 384
            SSLAG   GK  IVEEGGI ALVEAIEDGS+KGKEFAV+TLLQLC E+
Sbjct: 362  SSLAGIQEGKDAIVEEGGIAALVEAIEDGSLKGKEFAVLTLLQLCVES 409



 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
 Frame = -3

Query: 998 DNRALIGESGAIPALISLLHSSDPWTQEHAVTAILNLSLLEENKTLITKHGAIKPLIYVL 819
           +N+  IG  GAIP L+SLL +     ++ A+T +  L  ++ NK      GA+KPL+ ++
Sbjct: 287 ENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALV 346

Query: 818 KTGTETSKQNAACALLNLSFLDENKVSVGASGAIPPLVALLKNGSSRGKKDAITTLYKIC 639
                   + A   L +L+ + E K ++   G I  LV  +++GS +GK+ A+ TL ++C
Sbjct: 347 AEQGTGLAEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSLKGKEFAVLTLLQLC 406

Query: 638 SVKV-NKERVVAAGAVKPLVEMVAEQGSGMAE-KAMVVLSSL 519
              V N+  +V+ G + PLV + ++ GS  A+ KA  +L  L
Sbjct: 407 VESVRNRGLLVSEGGIPPLVAL-SQTGSVRAKHKAETLLGYL 447


>ref|XP_003546191.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 457

 Score =  468 bits (1204), Expect = e-129
 Identities = 258/381 (67%), Positives = 292/381 (76%), Gaps = 4/381 (1%)
 Frame = -3

Query: 1514 KIQRPLGRSMRTIRSTLYQSDEQSFNSEPGSPRSTYVSENLTDSVMDLRLGELATKPXXX 1335
            K QR +GRSMRTIRS  +Q D  S  S   + +ST +SENLTDSV+DLRLGELA +    
Sbjct: 29   KTQRQIGRSMRTIRSNFFQDDNSSSCSF--TEKSTCLSENLTDSVVDLRLGELALR-NSK 85

Query: 1334 XXXXXXXXXXXXXXSQAFSDFSACSSDISGELQRLATLPSPETPGLTD----PVREPEPC 1167
                          SQAFSDFSACSSDISGELQRLATLPSP+    +     P  E EPC
Sbjct: 86   SVKYSPTEEELLDLSQAFSDFSACSSDISGELQRLATLPSPKKSDFSGENEAPEPEIEPC 145

Query: 1166 QGFLQRDNFSTEIIESISPEDLLPTVKLCIDGLNSTSIXXXXXXXXXXXXXXXXRSDNRA 987
             GFLQR+NFSTEIIESISPEDL PTVK+CIDGL S S+                R+DNR 
Sbjct: 146  MGFLQRENFSTEIIESISPEDLQPTVKMCIDGLQSQSVAVKRSAAAKLRLLAKNRADNRV 205

Query: 986  LIGESGAIPALISLLHSSDPWTQEHAVTAILNLSLLEENKTLITKHGAIKPLIYVLKTGT 807
            LI ESGA+P L  LL  SDPWTQEHAVTA+LNLSL E+NK LIT  GA+K L+YVLKTGT
Sbjct: 206  LIAESGAVPVLAPLLRCSDPWTQEHAVTALLNLSLHEDNKMLITNAGAVKSLVYVLKTGT 265

Query: 806  ETSKQNAACALLNLSFLDENKVSVGASGAIPPLVALLKNGSSRGKKDAITTLYKICSVKV 627
            ETSKQNAACALL+L+ ++ENK S+GASGAIPPLV+LL NGSSRGKKDA+TTLYK+CSV+ 
Sbjct: 266  ETSKQNAACALLSLALVEENKSSIGASGAIPPLVSLLLNGSSRGKKDALTTLYKLCSVRQ 325

Query: 626  NKERVVAAGAVKPLVEMVAEQGSGMAEKAMVVLSSLAGTDVGKTEIVEEGGIPALVEAIE 447
            NKER V+AGAVKPLVE+VAEQGSGMAEKAMVVL+SLAG   GK  IVEEGGI ALVEAIE
Sbjct: 326  NKERTVSAGAVKPLVELVAEQGSGMAEKAMVVLNSLAGIQEGKNAIVEEGGIAALVEAIE 385

Query: 446  DGSMKGKEFAVVTLLQLCSEN 384
            DGS+KGKEFAV+TLLQLC ++
Sbjct: 386  DGSVKGKEFAVLTLLQLCVDS 406



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 53/162 (32%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
 Frame = -3

Query: 998 DNRALIGESGAIPALISLLHSSDPWTQEHAVTAILNLSLLEENKTLITKHGAIKPLIYVL 819
           +N++ IG SGAIP L+SLL +     ++ A+T +  L  + +NK      GA+KPL+ ++
Sbjct: 284 ENKSSIGASGAIPPLVSLLLNGSSRGKKDALTTLYKLCSVRQNKERTVSAGAVKPLVELV 343

Query: 818 KTGTETSKQNAACALLNLSFLDENKVSVGASGAIPPLVALLKNGSSRGKKDAITTLYKIC 639
                   + A   L +L+ + E K ++   G I  LV  +++GS +GK+ A+ TL ++C
Sbjct: 344 AEQGSGMAEKAMVVLNSLAGIQEGKNAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLC 403

Query: 638 SVKV-NKERVVAAGAVKPLVEMVAEQGSGMAE-KAMVVLSSL 519
              V N+  +V  G + PLV + ++ GS  A+ KA  +L  L
Sbjct: 404 VDSVRNRGFLVREGGIPPLVAL-SQTGSVRAKHKAETLLRYL 444


>ref|XP_003594249.1| U-box domain-containing protein [Medicago truncatula]
            gi|355483297|gb|AES64500.1| U-box domain-containing
            protein [Medicago truncatula]
          Length = 460

 Score =  466 bits (1198), Expect = e-128
 Identities = 259/386 (67%), Positives = 296/386 (76%), Gaps = 9/386 (2%)
 Frame = -3

Query: 1514 KIQRPLGRSMRTIRSTLYQSDEQSFNSEPGSPRSTYVSENLTDSVMDLRLGELATKPXXX 1335
            K QR +GRSMRT RS+++  D  S      + RST VSENLTDSV+DLRLGELA+K    
Sbjct: 29   KSQRNIGRSMRTRRSSIFDEDNSSCTF---TERSTCVSENLTDSVVDLRLGELASK-NHK 84

Query: 1334 XXXXXXXXXXXXXXSQAFSDF--SACSSDISGELQRLATLPSPETPGLTD-------PVR 1182
                          SQAFS++  SACSSDISGELQRLATLPSPE  G +         V 
Sbjct: 85   SGKSSTSEQDLLDLSQAFSEYAYSACSSDISGELQRLATLPSPECDGGSGVGGDGVVEVV 144

Query: 1181 EPEPCQGFLQRDNFSTEIIESISPEDLLPTVKLCIDGLNSTSIXXXXXXXXXXXXXXXXR 1002
            EPEPC GFLQR+NFSTEIIESISPEDL PTVKLC+DGL S+S+                R
Sbjct: 145  EPEPCMGFLQRENFSTEIIESISPEDLQPTVKLCVDGLQSSSVAVKRSAAAKLRLLAKNR 204

Query: 1001 SDNRALIGESGAIPALISLLHSSDPWTQEHAVTAILNLSLLEENKTLITKHGAIKPLIYV 822
            +DNR LIGESGA+P L+ LL  SDPWTQEHAVTA+LNLSL E+NK LI   GA+K LIYV
Sbjct: 205  ADNRVLIGESGAVPLLVPLLRCSDPWTQEHAVTALLNLSLHEDNKKLIFNAGAVKSLIYV 264

Query: 821  LKTGTETSKQNAACALLNLSFLDENKVSVGASGAIPPLVALLKNGSSRGKKDAITTLYKI 642
            LKTGTETSKQNAACALL+L+ ++ENK S+GASGAIPPLV+LL NGS+RGKKDA+TTLYK+
Sbjct: 265  LKTGTETSKQNAACALLSLALVEENKSSIGASGAIPPLVSLLLNGSNRGKKDALTTLYKL 324

Query: 641  CSVKVNKERVVAAGAVKPLVEMVAEQGSGMAEKAMVVLSSLAGTDVGKTEIVEEGGIPAL 462
            CSVK NKER V+AG VKPLVE+VAEQG+GM EKAMVVL+SLAG D GK  IVEEGGI AL
Sbjct: 325  CSVKQNKERAVSAGVVKPLVELVAEQGNGMMEKAMVVLNSLAGFDEGKEAIVEEGGIAAL 384

Query: 461  VEAIEDGSMKGKEFAVVTLLQLCSEN 384
            VEAIEDGS+KGKEFAV+TLLQLC+E+
Sbjct: 385  VEAIEDGSVKGKEFAVLTLLQLCAES 410


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