BLASTX nr result

ID: Bupleurum21_contig00002738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002738
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511400.1| conserved hypothetical protein [Ricinus comm...   277   2e-72
emb|CAN67215.1| hypothetical protein VITISV_005839 [Vitis vinifera]   268   1e-69
ref|XP_002282743.1| PREDICTED: peroxisomal membrane protein PEX1...   267   2e-69
ref|XP_002321598.1| predicted protein [Populus trichocarpa] gi|2...   262   8e-68
ref|XP_002318047.1| predicted protein [Populus trichocarpa] gi|2...   246   8e-63

>ref|XP_002511400.1| conserved hypothetical protein [Ricinus communis]
           gi|223550515|gb|EEF52002.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 535

 Score =  277 bits (709), Expect = 2e-72
 Identities = 157/305 (51%), Positives = 193/305 (63%), Gaps = 15/305 (4%)
 Frame = -3

Query: 925 MATQSAPP-SNPTDQTPQNPVSENEKPVSEVHQD-------RSPPSVFVNSEPIREDQVQ 770
           MAT+S PP S+ +D+ PQN   E  +P +E+ Q        +SPPSVFVNSEP+REDQVQ
Sbjct: 1   MATESPPPPSSSSDEKPQNSAVEAAQPTNEIQQQAREEVTKQSPPSVFVNSEPMREDQVQ 60

Query: 769 NAVKFLSHPKVKGSPVMYRRSFLEKKGLTKEEIDEAFRRVPDPSPGVSTAQPAGDGSVN- 593
           NAVKFLSHPKV+GSPVMYRRSFLE+KGLTKEEIDEAFRRVPDPSP       + +  +N 
Sbjct: 61  NAVKFLSHPKVRGSPVMYRRSFLERKGLTKEEIDEAFRRVPDPSPSAQATSTSQEAQLNS 120

Query: 592 PPNLQQQTPSQALQPAAATPVGTVSKVGTLAQYRFGWQQALLAISVLAISGAGTALVFKK 413
             N+Q  + +QALQPAAA P G +S  GTL + RF W  A+ A+ VLA SGAGTA++ K 
Sbjct: 121 TSNIQPASQTQALQPAAAAPTGAISSAGTLMRTRFHWYHAVFAVGVLAASGAGTAVLIKN 180

Query: 412 AIVPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASDVARATQDMLVSKN 233
            IVPR                                      AA+DVA+A+Q+ML SKN
Sbjct: 181 CIVPRFKSWIRKVVFEEEDPVKKTNAKPSLAEEAAAAAKAAAAAAADVAKASQEMLNSKN 240

Query: 232 GEKIYFDELMNLLGVQVQEMKSMSDAIKKLEGKN------TISRQDDHRVAVSNSNPPYP 71
            EK YF E MNLL +QVQEMKSMS AI KLEG+N      ++  Q+D+ ++V N +P   
Sbjct: 241 EEKRYFGEFMNLLDLQVQEMKSMSTAIHKLEGQNNNLGRTSLVNQEDYTLSVGN-HPKQT 299

Query: 70  YANGK 56
           Y NGK
Sbjct: 300 YVNGK 304


>emb|CAN67215.1| hypothetical protein VITISV_005839 [Vitis vinifera]
          Length = 523

 Score =  268 bits (685), Expect = 1e-69
 Identities = 158/308 (51%), Positives = 191/308 (62%), Gaps = 14/308 (4%)
 Frame = -3

Query: 925 MATQSAPPSNPTDQTPQNPVSENEKPVSEVHQDR------SPPSVFVNSEPIREDQVQNA 764
           MATQS PP + T + PQ P SE  +P +E  QD       SPPSVFVNSEP+RE+QVQNA
Sbjct: 1   MATQSTPPPDSTTEKPQTPASEXVQPRNEDQQDAKAAATISPPSVFVNSEPMREEQVQNA 60

Query: 763 VKFLSHPKVKGSPVMYRRSFLEKKGLTKEEIDEAFRRVPDPSP---GVSTAQPAGDGSVN 593
           VKFLSHPKV+GSPV+YRRSFLEKKGLTKEEIDEAFRRVPD SP   GV       DG + 
Sbjct: 61  VKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDQSPTVTGVQAVSANQDGQLK 120

Query: 592 PPNLQQQTPSQALQPAAATPVGTVSKVGTLAQYRFGWQQALLAISVLAISGAGTALVFKK 413
             N+QQQ  +Q L P+AATP G +SK GT  QYRF W  A LAI  LA SGAGTA++FK 
Sbjct: 121 SSNIQQQAQAQTLHPSAATPAGVISKTGT--QYRFHWSHAFLAIGFLAASGAGTAILFKN 178

Query: 412 AIVPRL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASDVARATQDMLVSK 236
           A +PRL                                      AA+DVA+ +Q++L SK
Sbjct: 179 AFIPRLKSWIRKIVLEGENDIVQKSNSKPSLAEEATAAAKAAAAAAADVAKTSQEILTSK 238

Query: 235 NGEKIYFDELMNLLGVQVQEMKSMSDAIKKLEGKNT----ISRQDDHRVAVSNSNPPYPY 68
             E    +E MNLL VQVQEMKSMS+AI+KLEG N     + +Q+D R  ++ S   +  
Sbjct: 239 IEENRRLEEFMNLLNVQVQEMKSMSNAIRKLEGPNNSTGRLIQQEDTRGLMTTSK--HLN 296

Query: 67  ANGKSDFN 44
            NGK++F+
Sbjct: 297 VNGKAEFD 304


>ref|XP_002282743.1| PREDICTED: peroxisomal membrane protein PEX14 [Vitis vinifera]
           gi|297733783|emb|CBI15030.3| unnamed protein product
           [Vitis vinifera]
          Length = 523

 Score =  267 bits (683), Expect = 2e-69
 Identities = 158/308 (51%), Positives = 191/308 (62%), Gaps = 14/308 (4%)
 Frame = -3

Query: 925 MATQSAPPSNPTDQTPQNPVSENEKPVSEVHQDR------SPPSVFVNSEPIREDQVQNA 764
           MATQS PP + T + PQ P SE  +P +E  QD       SPPSVFVNSEP+RE+QVQNA
Sbjct: 1   MATQSTPPPDSTTEKPQTPASEIVQPRNEDQQDAKAAATISPPSVFVNSEPMREEQVQNA 60

Query: 763 VKFLSHPKVKGSPVMYRRSFLEKKGLTKEEIDEAFRRVPDPSP---GVSTAQPAGDGSVN 593
           VKFLSHPKV+GSPV+YRRSFLEKKGLTKEEIDEAFRRVPD SP   GV       DG + 
Sbjct: 61  VKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDQSPTVTGVQAVSANQDGQLK 120

Query: 592 PPNLQQQTPSQALQPAAATPVGTVSKVGTLAQYRFGWQQALLAISVLAISGAGTALVFKK 413
             N+QQQ  +Q L P+AATP G +SK GT  QYRF W  A LAI  LA SGAGTA++FK 
Sbjct: 121 SSNIQQQAQAQTLHPSAATPAGVISKTGT--QYRFHWSHAFLAIGFLAASGAGTAILFKN 178

Query: 412 AIVPRL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASDVARATQDMLVSK 236
           A +PRL                                      AA+DVA+ +Q++L SK
Sbjct: 179 AFIPRLKSWIRKIVLEGENDIVQKSNSKPSLAEEATAAAKAAAAAAADVAKTSQEILTSK 238

Query: 235 NGEKIYFDELMNLLGVQVQEMKSMSDAIKKLEGKNT----ISRQDDHRVAVSNSNPPYPY 68
             E    +E MNLL VQVQEMKSMS+AI+KLEG N     + +Q+D R  ++ S   +  
Sbjct: 239 IEENRRLEEFMNLLNVQVQEMKSMSNAIRKLEGPNNSTGRLIQQEDTRGLMTTSK--HLN 296

Query: 67  ANGKSDFN 44
            NGK++F+
Sbjct: 297 VNGKAEFD 304


>ref|XP_002321598.1| predicted protein [Populus trichocarpa] gi|222868594|gb|EEF05725.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  262 bits (670), Expect = 8e-68
 Identities = 149/289 (51%), Positives = 189/289 (65%), Gaps = 16/289 (5%)
 Frame = -3

Query: 862 ENEKPVSEVHQD-------RSPPSVFVNSEPIREDQVQNAVKFLSHPKVKGSPVMYRRSF 704
           EN +P + V Q        +SPPSVFVNSEP+RE+QVQNAVKFLSHPKV+GSPVMYRRSF
Sbjct: 1   ENVQPSTGVQQGAGAEAIKQSPPSVFVNSEPMREEQVQNAVKFLSHPKVRGSPVMYRRSF 60

Query: 703 LEKKGLTKEEIDEAFRRVPDPSPGV-STAQPAGDGSV-NPPNLQQQTPSQALQPAAATPV 530
           LEKKGLTKEEIDEAFRRVPDP+P   +T+    +G V + PN+Q   P+Q LQP AA P 
Sbjct: 61  LEKKGLTKEEIDEAFRRVPDPTPSTQATSSSQAEGQVISTPNVQPPAPAQTLQPVAAAPT 120

Query: 529 GTVSKVGTLAQYRFGWQQALLAISVLAISGAGTALVFKKAIVPRL-XXXXXXXXXXXXXX 353
           G +S + TL Q++F W  A +A+ VLA+SGAGTA++ KK I+PRL               
Sbjct: 121 GVISTMRTLTQHQFNWHHAFVAVGVLAVSGAGTAVLVKKTIIPRLKSWIRKVVLEEEDDS 180

Query: 352 XXXXXXXXXXXXXXXXXXXXXXXAASDVARATQDMLVSKNGEKIYFDELMNLLGVQVQEM 173
                                  AA+DVARA+Q+ML SKN EKI F E MN+L VQVQEM
Sbjct: 181 VMKTNTKLSLAEEAAAAAKAAAAAAADVARASQEMLNSKNEEKICFKEFMNMLDVQVQEM 240

Query: 172 KSMSDAIKKLEG------KNTISRQDDHRVAVSNSNPPYPYANGKSDFN 44
           KSMS AI +LEG      +N+++ Q+D+R +V  +NP   + NGK++F+
Sbjct: 241 KSMSTAIHRLEGQTDYRVRNSLADQEDYRASV--ANPKQTFTNGKAEFD 287


>ref|XP_002318047.1| predicted protein [Populus trichocarpa] gi|222858720|gb|EEE96267.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score =  246 bits (627), Expect = 8e-63
 Identities = 141/286 (49%), Positives = 180/286 (62%), Gaps = 16/286 (5%)
 Frame = -3

Query: 853 KPVSEVHQD-------RSPPSVFVNSEPIREDQVQNAVKFLSHPKVKGSPVMYRRSFLEK 695
           +P + + QD       +SPPSVFVNSEP+RE+QVQNAVKFLSHPKV+GSPVMYRRSFLEK
Sbjct: 1   QPTNGIQQDAEVEAIKQSPPSVFVNSEPMREEQVQNAVKFLSHPKVRGSPVMYRRSFLEK 60

Query: 694 KGLTKEEIDEAFRRVPDPSPGV-STAQPAGDGSV-NPPNLQQQTPSQALQPAAATPVGTV 521
           KGLTKEEIDEAF RVPDP+P   +T+    +G V + PN Q    +Q LQP AA P   +
Sbjct: 61  KGLTKEEIDEAFLRVPDPTPSTQATSLNQAEGQVKSTPNAQPLASAQTLQPVAAGPTAVI 120

Query: 520 SKVGTLAQYRFGWQQALLAISVLAISGAGTALVFKKAIVPRLXXXXXXXXXXXXXXXXXX 341
           S VGTL + RF W  A+ A+ +LA+SGAGT ++ K  ++PRL                  
Sbjct: 121 SSVGTLTRSRFHWYHAVFAVGLLAVSGAGTVVLVKNTVIPRLKSWIRKVVLEEEDDNVKK 180

Query: 340 XXXXXXXXXXXXXXXXXXXAAS-DVARATQDMLVSKNGEKIYFDELMNLLGVQVQEMKSM 164
                              AA+ DVARA+Q++L SKN EK YF E M +L VQVQEMKSM
Sbjct: 181 TNLKPSLAEEAAAAAKSAAAAAVDVARASQELLNSKNEEKRYFKEFMKMLDVQVQEMKSM 240

Query: 163 SDAIKKLEG------KNTISRQDDHRVAVSNSNPPYPYANGKSDFN 44
           S AI +LEG      +N+++ Q+D+R  V  +NP   Y NGK++F+
Sbjct: 241 STAIHRLEGQTDNRVRNSLADQEDYRALV--ANPKQTYTNGKTEFD 284


Top