BLASTX nr result

ID: Bupleurum21_contig00002732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002732
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632932.1| PREDICTED: 60S ribosomal protein L7-4-like [...   284   8e-75
ref|XP_003632930.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...   281   5e-74
ref|NP_187967.1| 60S ribosomal protein L7-4 [Arabidopsis thalian...   281   7e-74
ref|XP_002882831.1| hypothetical protein ARALYDRAFT_478749 [Arab...   280   9e-74
ref|XP_004167340.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...   280   1e-73

>ref|XP_003632932.1| PREDICTED: 60S ribosomal protein L7-4-like [Vitis vinifera]
           gi|297735811|emb|CBI18498.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  284 bits (726), Expect = 8e-75
 Identities = 141/173 (81%), Positives = 157/173 (90%)
 Frame = +2

Query: 50  MVEVEMKGNPVVPESFLKKQKRAEEWALAKKQEVEATKKKNLENRKLIFNRAKAYSKEYQ 229
           M E + KG PV+PES LKKQKR EEW LAKKQEVEA KKKN +NRKLI++RAK Y+KEY+
Sbjct: 1   MGEEDAKGGPVIPESVLKKQKRNEEWTLAKKQEVEAKKKKNADNRKLIYSRAKQYAKEYE 60

Query: 230 EQEKELIRLKREARLKGGFYVSPEPKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 409
           EQ+KELI+LKREA+LKGGFYV PE KLLF+IRIRGINA+ PKT+KILQLLRLRQIFNGVF
Sbjct: 61  EQQKELIQLKREAKLKGGFYVDPEAKLLFMIRIRGINAMHPKTRKILQLLRLRQIFNGVF 120

Query: 410 LKVNKATLNMLHRVEPYVTYGYPNHKSVKELIYKRGHGKLNGQRIALTDNSIV 568
           LKVNKAT+NMLHRVEPYVTYGYPN KSV+ELIYKRG+GKLN QR ALTDNSIV
Sbjct: 121 LKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIV 173


>ref|XP_003632930.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L7-4-like
           [Vitis vinifera]
          Length = 246

 Score =  281 bits (719), Expect = 5e-74
 Identities = 141/173 (81%), Positives = 155/173 (89%)
 Frame = +2

Query: 50  MVEVEMKGNPVVPESFLKKQKRAEEWALAKKQEVEATKKKNLENRKLIFNRAKAYSKEYQ 229
           M E E KG PV+PES LKKQKR+EEW L KKQEVEA KKKN ENRKLI++RAK Y+KEY+
Sbjct: 1   MGEEEAKGGPVIPESVLKKQKRSEEWTLXKKQEVEAKKKKNAENRKLIYSRAKQYAKEYE 60

Query: 230 EQEKELIRLKREARLKGGFYVSPEPKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 409
           EQ+KELI+LK EA+LKGGFYV PE KLLFIIRIRGINA+ PKT+KILQLL LRQIFNGVF
Sbjct: 61  EQQKELIQLKHEAKLKGGFYVDPEVKLLFIIRIRGINAMHPKTRKILQLLCLRQIFNGVF 120

Query: 410 LKVNKATLNMLHRVEPYVTYGYPNHKSVKELIYKRGHGKLNGQRIALTDNSIV 568
           LKVNKAT+NMLHRVEPYVTYGYPN KSV+ELIYKRG+GKLN QR ALTDNSIV
Sbjct: 121 LKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIV 173


>ref|NP_187967.1| 60S ribosomal protein L7-4 [Arabidopsis thaliana]
           gi|42572417|ref|NP_974304.1| 60S ribosomal protein L7-4
           [Arabidopsis thaliana] gi|42572419|ref|NP_974305.1| 60S
           ribosomal protein L7-4 [Arabidopsis thaliana]
           gi|38503370|sp|Q9LHP1.1|RL74_ARATH RecName: Full=60S
           ribosomal protein L7-4 gi|11994560|dbj|BAB02600.1| 60S
           ribosomal protein L7 [Arabidopsis thaliana]
           gi|14532552|gb|AAK64004.1| AT3g13580/K20M4_2
           [Arabidopsis thaliana] gi|15810196|gb|AAL06999.1|
           AT3g13580/K20M4_2 [Arabidopsis thaliana]
           gi|18655395|gb|AAL76153.1| AT3g13580/K20M4_2
           [Arabidopsis thaliana] gi|332641855|gb|AEE75376.1| 60S
           ribosomal protein L7-4 [Arabidopsis thaliana]
           gi|332641856|gb|AEE75377.1| 60S ribosomal protein L7-4
           [Arabidopsis thaliana] gi|332641857|gb|AEE75378.1| 60S
           ribosomal protein L7-4 [Arabidopsis thaliana]
          Length = 244

 Score =  281 bits (718), Expect = 7e-74
 Identities = 146/173 (84%), Positives = 154/173 (89%)
 Frame = +2

Query: 50  MVEVEMKGNPVVPESFLKKQKRAEEWALAKKQEVEATKKKNLENRKLIFNRAKAYSKEYQ 229
           M E E K   VVPES LKK+KR EEWALAKKQE+EA KK+N E RKLIFNRAK YSKEYQ
Sbjct: 1   MTEAESK--TVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQ 58

Query: 230 EQEKELIRLKREARLKGGFYVSPEPKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 409
           E+E+ELI+LKREA+LKGGFYV PE KLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 59  EKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 118

Query: 410 LKVNKATLNMLHRVEPYVTYGYPNHKSVKELIYKRGHGKLNGQRIALTDNSIV 568
           LKVNKAT+NML RVEPYVTYGYPN KSVKELIYKRG GKLN QR ALTDNSIV
Sbjct: 119 LKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIV 171


>ref|XP_002882831.1| hypothetical protein ARALYDRAFT_478749 [Arabidopsis lyrata subsp.
           lyrata] gi|297328671|gb|EFH59090.1| hypothetical protein
           ARALYDRAFT_478749 [Arabidopsis lyrata subsp. lyrata]
          Length = 244

 Score =  280 bits (717), Expect = 9e-74
 Identities = 146/173 (84%), Positives = 154/173 (89%)
 Frame = +2

Query: 50  MVEVEMKGNPVVPESFLKKQKRAEEWALAKKQEVEATKKKNLENRKLIFNRAKAYSKEYQ 229
           M E E K   VVPES LKK+KR EEWALAKKQE+EA KK+N E RKLIFNRAK YSKEYQ
Sbjct: 1   MTEAESK--TVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQ 58

Query: 230 EQEKELIRLKREARLKGGFYVSPEPKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 409
           E+E+ELI+LKREA+LKGGFYV PE KLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 59  EKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 118

Query: 410 LKVNKATLNMLHRVEPYVTYGYPNHKSVKELIYKRGHGKLNGQRIALTDNSIV 568
           LKVNKAT+NML RVEPYVTYGYPN KSV ELIYKRG GKLN QRIALTDNSIV
Sbjct: 119 LKVNKATINMLRRVEPYVTYGYPNLKSVTELIYKRGFGKLNHQRIALTDNSIV 171


>ref|XP_004167340.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L7-4-like
           [Cucumis sativus]
          Length = 246

 Score =  280 bits (716), Expect = 1e-73
 Identities = 140/168 (83%), Positives = 152/168 (90%)
 Frame = +2

Query: 65  MKGNPVVPESFLKKQKRAEEWALAKKQEVEATKKKNLENRKLIFNRAKAYSKEYQEQEKE 244
           +KG PVVPES LKKQKR EEWALA+K+ +E  KKKN ENRKLI+ RAK Y+KEY EQ+KE
Sbjct: 6   VKGGPVVPESVLKKQKRNEEWALAEKKXLEVAKKKNAENRKLIYTRAKLYAKEYDEQQKE 65

Query: 245 LIRLKREARLKGGFYVSPEPKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK 424
           LI+LKREA+LKGGFYV PE KLLFIIRIRGINAIDPKT+KILQLLRLRQIFNGVFLKVNK
Sbjct: 66  LIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTRKILQLLRLRQIFNGVFLKVNK 125

Query: 425 ATLNMLHRVEPYVTYGYPNHKSVKELIYKRGHGKLNGQRIALTDNSIV 568
           ATLNMLHRVEPYVTYGYPN KSVKELIYKRG GKLN +R ALTDNSI+
Sbjct: 126 ATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSII 173


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