BLASTX nr result

ID: Bupleurum21_contig00002731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002731
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26220.3| unnamed protein product [Vitis vinifera]              380   e-103
ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera]           380   e-103
emb|CAN71612.1| hypothetical protein VITISV_012971 [Vitis vinifera]   376   e-102
ref|XP_002517211.1| Cyclin-L1, putative [Ricinus communis] gi|22...   359   6e-97
ref|XP_004140152.1| PREDICTED: cyclin-T1-4-like [Cucumis sativus]     340   5e-91

>emb|CBI26220.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  380 bits (976), Expect = e-103
 Identities = 201/319 (63%), Positives = 242/319 (75%)
 Frame = +2

Query: 131  MALAQAYRSQVGPFRGDRRSSFNRNHHTVITNTAPTTNNSYNLPDNFLSNYNNSYDFSRN 310
            M+  Q YR+Q G F  + R SF RN ++          NS N+ DN + +YN  +DFSRN
Sbjct: 1    MSFTQTYRAQGGTFHDNYRPSFIRNKNS----------NSANINDNRIRSYN-PHDFSRN 49

Query: 311  FWEQNYYNKYAEADVAPAMKRRKVSTSAWESSMRPYIQPYTFESGPSVNKNSSVRVDSMR 490
            F E++    Y   D AP++KRRK S SAWE + R Y Q  T+++ PS   NS V   + R
Sbjct: 50   FRERSKNYNYVNHDAAPSLKRRKFSASAWEDTGRRYQQQTTYDNAPSTC-NSLVPAPT-R 107

Query: 491  PDAIAHHQPPTCKRDRSKFEEEDVVFMSRDEIERCSPSRKDGIDALQETRLRYSYCSFLQ 670
            P+A A+    +CKRDRSK E++D+VFMSRDEIERCSPSRKDGIDAL+E  LRYSYC+FLQ
Sbjct: 108  PNANAYTST-SCKRDRSKLEDDDMVFMSRDEIERCSPSRKDGIDALREMHLRYSYCAFLQ 166

Query: 671  NLGIQLEIPQTTIGTAMVLCHRFFVRKSHACHDRFLISTAAIFLAAKSEETACPLNNVLR 850
            NLG++LE+PQTTIGTAMVLCHRFFVR+SHACHDRFLI+TA++FLAAKSEET  PLNNV+R
Sbjct: 167  NLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFLIATASLFLAAKSEETQRPLNNVVR 226

Query: 851  ASCEMLHNQDFDVLLYSFPVGWFEQYRERVIEAEQLILTTLNFELNVQHPYASLTSTLDK 1030
            ASCE+LH  D   L Y  PV WFEQYRERVIEAEQ+ILTTL+FEL V+HPY  LTS L+K
Sbjct: 227  ASCEILHKLDLTFLSYLLPVDWFEQYRERVIEAEQMILTTLDFELTVEHPYVPLTSVLNK 286

Query: 1031 LGLSQSILVNLALSLVSEG 1087
            LGLSQ++LVNLAL LVSEG
Sbjct: 287  LGLSQTVLVNLALHLVSEG 305


>ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera]
          Length = 363

 Score =  380 bits (976), Expect = e-103
 Identities = 201/319 (63%), Positives = 242/319 (75%)
 Frame = +2

Query: 131  MALAQAYRSQVGPFRGDRRSSFNRNHHTVITNTAPTTNNSYNLPDNFLSNYNNSYDFSRN 310
            M+  Q YR+Q G F  + R SF RN ++          NS N+ DN + +YN  +DFSRN
Sbjct: 1    MSFTQTYRAQGGTFHDNYRPSFIRNKNS----------NSANINDNRIRSYN-PHDFSRN 49

Query: 311  FWEQNYYNKYAEADVAPAMKRRKVSTSAWESSMRPYIQPYTFESGPSVNKNSSVRVDSMR 490
            F E++    Y   D AP++KRRK S SAWE + R Y Q  T+++ PS   NS V   + R
Sbjct: 50   FRERSKNYNYVNHDAAPSLKRRKFSASAWEDTGRRYQQQTTYDNAPSTC-NSLVPAPT-R 107

Query: 491  PDAIAHHQPPTCKRDRSKFEEEDVVFMSRDEIERCSPSRKDGIDALQETRLRYSYCSFLQ 670
            P+A A+    +CKRDRSK E++D+VFMSRDEIERCSPSRKDGIDAL+E  LRYSYC+FLQ
Sbjct: 108  PNANAYTST-SCKRDRSKLEDDDMVFMSRDEIERCSPSRKDGIDALREMHLRYSYCAFLQ 166

Query: 671  NLGIQLEIPQTTIGTAMVLCHRFFVRKSHACHDRFLISTAAIFLAAKSEETACPLNNVLR 850
            NLG++LE+PQTTIGTAMVLCHRFFVR+SHACHDRFLI+TA++FLAAKSEET  PLNNV+R
Sbjct: 167  NLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFLIATASLFLAAKSEETQRPLNNVVR 226

Query: 851  ASCEMLHNQDFDVLLYSFPVGWFEQYRERVIEAEQLILTTLNFELNVQHPYASLTSTLDK 1030
            ASCE+LH  D   L Y  PV WFEQYRERVIEAEQ+ILTTL+FEL V+HPY  LTS L+K
Sbjct: 227  ASCEILHKLDLTFLSYLLPVDWFEQYRERVIEAEQMILTTLDFELTVEHPYVPLTSVLNK 286

Query: 1031 LGLSQSILVNLALSLVSEG 1087
            LGLSQ++LVNLAL LVSEG
Sbjct: 287  LGLSQTVLVNLALHLVSEG 305


>emb|CAN71612.1| hypothetical protein VITISV_012971 [Vitis vinifera]
          Length = 443

 Score =  376 bits (965), Expect = e-102
 Identities = 200/319 (62%), Positives = 239/319 (74%)
 Frame = +2

Query: 131  MALAQAYRSQVGPFRGDRRSSFNRNHHTVITNTAPTTNNSYNLPDNFLSNYNNSYDFSRN 310
            M+  Q YR+Q G    + R SF RN ++          NS N+ DN + +YN  +DFSRN
Sbjct: 1    MSFTQTYRAQGGTLHDNYRPSFIRNKNS----------NSANINDNRIRSYN-PHDFSRN 49

Query: 311  FWEQNYYNKYAEADVAPAMKRRKVSTSAWESSMRPYIQPYTFESGPSVNKNSSVRVDSMR 490
            F E +    Y   D AP++KRRK S SAWE + R Y Q  T+++ PS   NS V   + R
Sbjct: 50   FREXSKNYNYVNHDAAPSLKRRKFSASAWEDTGRHYQQQTTYDNAPSTC-NSLVPAPT-R 107

Query: 491  PDAIAHHQPPTCKRDRSKFEEEDVVFMSRDEIERCSPSRKDGIDALQETRLRYSYCSFLQ 670
            P+A A+    +CKRDRSK E++D+VFMSRDEIERCSPSRKDGIDAL+E  LRYSYC+FLQ
Sbjct: 108  PNANAYTST-SCKRDRSKLEDDDMVFMSRDEIERCSPSRKDGIDALREMHLRYSYCAFLQ 166

Query: 671  NLGIQLEIPQTTIGTAMVLCHRFFVRKSHACHDRFLISTAAIFLAAKSEETACPLNNVLR 850
            NLG++LE PQTTIGTAMVLCHRFFVR+SHACHDRFLI+TA++FLAAKSEET  PLNNV+R
Sbjct: 167  NLGLRLEXPQTTIGTAMVLCHRFFVRRSHACHDRFLIATASLFLAAKSEETQRPLNNVVR 226

Query: 851  ASCEMLHNQDFDVLLYSFPVGWFEQYRERVIEAEQLILTTLNFELNVQHPYASLTSTLDK 1030
            ASCE+LH  D   L Y  PV WFEQYRERVIEAEQ+ILTTL+FEL V+HPY  LTS L+K
Sbjct: 227  ASCEILHKLDLTFLSYLLPVDWFEQYRERVIEAEQMILTTLDFELTVEHPYVPLTSVLNK 286

Query: 1031 LGLSQSILVNLALSLVSEG 1087
            LGLSQ++LVNLAL LVSEG
Sbjct: 287  LGLSQTVLVNLALHLVSEG 305


>ref|XP_002517211.1| Cyclin-L1, putative [Ricinus communis] gi|223543846|gb|EEF45374.1|
            Cyclin-L1, putative [Ricinus communis]
          Length = 403

 Score =  359 bits (922), Expect = 6e-97
 Identities = 191/330 (57%), Positives = 238/330 (72%), Gaps = 14/330 (4%)
 Frame = +2

Query: 140  AQAYRSQVGPFRGDRRSSFNRNHHTVITN--------TAPTTNNS--YNLPDNFLSNYNN 289
            A+ Y SQ      DR  +FNRN++    N         + +TNN+  YN   N+ +N+N 
Sbjct: 20   ARNYHSQGSTLHDDRCHTFNRNNYNNNRNRNINTHRHNSNSTNNTHNYNYNYNYNNNWNY 79

Query: 290  SYDFSRNFWE----QNYYNKYAEADVAPAMKRRKVSTSAWESSMRPYIQPYTFESGPSVN 457
            ++DFS  F +    +N    Y   D AP++KRRK S   WE   R ++QP ++ES  S  
Sbjct: 80   NHDFSGKFRDHIDSENNNYVYPPND-APSLKRRKFSAGTWEDVRREFVQPVSYESAASSA 138

Query: 458  KNSSVRVDSMRPDAIAHHQPPTCKRDRSKFEEEDVVFMSRDEIERCSPSRKDGIDALQET 637
             N+ V +     +        +CKRDRSK E++D VFMSRDEIER SPSRKDGIDAL+E+
Sbjct: 139  YNNLVPLTRSNAETSTS---TSCKRDRSKLEDDDPVFMSRDEIERHSPSRKDGIDALRES 195

Query: 638  RLRYSYCSFLQNLGIQLEIPQTTIGTAMVLCHRFFVRKSHACHDRFLISTAAIFLAAKSE 817
             LRYSYC+FLQNLG++L++PQTTIGTAMVLCHRFFVR+SHACHDRFLI+TAA+FLA+KSE
Sbjct: 196  HLRYSYCAFLQNLGVRLDLPQTTIGTAMVLCHRFFVRRSHACHDRFLIATAALFLASKSE 255

Query: 818  ETACPLNNVLRASCEMLHNQDFDVLLYSFPVGWFEQYRERVIEAEQLILTTLNFELNVQH 997
            ET  PLNN+LRAS E+LH QD  +L Y  PV WFEQYRERVIEAEQ+ILTTLNFELNVQH
Sbjct: 256  ETPRPLNNMLRASSEILHKQDMSLLSYLLPVDWFEQYRERVIEAEQMILTTLNFELNVQH 315

Query: 998  PYASLTSTLDKLGLSQSILVNLALSLVSEG 1087
            PYA LTS L+K+G SQ++LVNLAL+L+SEG
Sbjct: 316  PYAPLTSVLNKIGFSQTVLVNLALNLISEG 345


>ref|XP_004140152.1| PREDICTED: cyclin-T1-4-like [Cucumis sativus]
          Length = 378

 Score =  340 bits (871), Expect = 5e-91
 Identities = 186/329 (56%), Positives = 229/329 (69%), Gaps = 10/329 (3%)
 Frame = +2

Query: 131  MALAQAYRSQVGPFRGDRRSSFNR----NHHTVITNTAPTTNNSYNLPDN---FLSNYNN 289
            MA  + + SQ G    D  ++ NR    NHH   T+ +   +  Y    N   FL  Y N
Sbjct: 1    MARVRNFSSQGGMVNDDYWATLNRYDVKNHHQN-TSRSSYYDYGYGYGSNHFEFLGQYKN 59

Query: 290  SYDFSRNFWEQNYYNKYAEADVAPAMKRRKVSTSAWESSMRPYIQPYTFESGPSVNKNSS 469
                 R+ + +       +   + + KRRK S S WE S R + Q  T+++GPS+  N  
Sbjct: 60   QV--GRSIYARPDNLNSTKPHNSQSFKRRKFSASRWEDSGRYHWQGRTYDNGPSIYSNL- 116

Query: 470  VRVDSMRPDAIAHHQPPT---CKRDRSKFEEEDVVFMSRDEIERCSPSRKDGIDALQETR 640
                 + P   +++   T   CKRDR   E+++  FMSRDEIERCSPSRKDGID ++ET 
Sbjct: 117  -----VHPPPRSNNDVSTSASCKRDRRIMEDDEPFFMSRDEIERCSPSRKDGIDTIRETH 171

Query: 641  LRYSYCSFLQNLGIQLEIPQTTIGTAMVLCHRFFVRKSHACHDRFLISTAAIFLAAKSEE 820
            LRY+YC+FLQ+LG+QLE+PQTTIGTAM+LCHRFFVR+SHACHDRFLI+T+A+FLAAKSEE
Sbjct: 172  LRYTYCAFLQSLGLQLELPQTTIGTAMILCHRFFVRRSHACHDRFLIATSALFLAAKSEE 231

Query: 821  TACPLNNVLRASCEMLHNQDFDVLLYSFPVGWFEQYRERVIEAEQLILTTLNFELNVQHP 1000
            T  PLNNVLRASCE+LH QDF+VL Y  PV WFEQYRERV EAEQLILTTLNFELNVQHP
Sbjct: 232  TPRPLNNVLRASCEILHKQDFNVLSYMLPVDWFEQYRERVTEAEQLILTTLNFELNVQHP 291

Query: 1001 YASLTSTLDKLGLSQSILVNLALSLVSEG 1087
            YA L S L+K+GLSQSILVNLAL+L+SEG
Sbjct: 292  YAPLMSVLNKIGLSQSILVNLALNLISEG 320


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