BLASTX nr result

ID: Bupleurum21_contig00002722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002722
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   431   e-119
emb|CBI40505.3| unnamed protein product [Vitis vinifera]              431   e-119
emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]   431   e-119
ref|XP_003529893.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   422   e-116
ref|XP_003548422.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   422   e-116

>ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Vitis
            vinifera]
          Length = 751

 Score =  431 bits (1109), Expect = e-119
 Identities = 220/266 (82%), Positives = 240/266 (90%), Gaps = 1/266 (0%)
 Frame = +2

Query: 5    KNASSFSRMEIEDSPTASPKSSPGGSDSYLSETRFDQCSVSSASLKAIKDAGYDKMTVVQ 184
            KNASS      ++   A P+SS G SDSYLSETRFDQC +S  SLKAIKDAGY+KMTVVQ
Sbjct: 254  KNASSLFGAAAKE---AVPRSSTGKSDSYLSETRFDQCPISPLSLKAIKDAGYEKMTVVQ 310

Query: 185  AATLPVILKGKDVLAKARTGTGKTVAFLLPSIELVTKSPPVGHDQKRPPILVLVVCPTRE 364
             ATLPVILKGKDVLAKA+TGTGKTVAFLLPSIE++ KSPP+  DQKRPPI+VLV+CPTRE
Sbjct: 311  EATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEILVKSPPISRDQKRPPIVVLVICPTRE 370

Query: 365  LASQAAAEANKLLKYHPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTP 544
            LASQAAAEAN LLKYHPS+GVQVVIGGTRL LEQKRMQ NPCQILVATPGRLKDHIENT 
Sbjct: 371  LASQAAAEANTLLKYHPSLGVQVVIGGTRLALEQKRMQANPCQILVATPGRLKDHIENTA 430

Query: 545  GFATRLMGVKALVLDEADHLLDMGFRKDIERIIAAVPKQRQTLMFSATVPQEVRQICHVA 724
            GFATRLMGVK LVLDEADHLLDMGFRKDIE+IIAAVPKQRQTL+FSATVP+EVRQICH+A
Sbjct: 431  GFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLLFSATVPEEVRQICHIA 490

Query: 725  LKRDHEFIDTV-KGSEDTHAQVTQTH 799
            LKRDHEFI+TV +GSE+TH+QV QTH
Sbjct: 491  LKRDHEFINTVQEGSEETHSQVRQTH 516


>emb|CBI40505.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  431 bits (1109), Expect = e-119
 Identities = 220/266 (82%), Positives = 240/266 (90%), Gaps = 1/266 (0%)
 Frame = +2

Query: 5    KNASSFSRMEIEDSPTASPKSSPGGSDSYLSETRFDQCSVSSASLKAIKDAGYDKMTVVQ 184
            KNASS      ++   A P+SS G SDSYLSETRFDQC +S  SLKAIKDAGY+KMTVVQ
Sbjct: 235  KNASSLFGAAAKE---AVPRSSTGKSDSYLSETRFDQCPISPLSLKAIKDAGYEKMTVVQ 291

Query: 185  AATLPVILKGKDVLAKARTGTGKTVAFLLPSIELVTKSPPVGHDQKRPPILVLVVCPTRE 364
             ATLPVILKGKDVLAKA+TGTGKTVAFLLPSIE++ KSPP+  DQKRPPI+VLV+CPTRE
Sbjct: 292  EATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEILVKSPPISRDQKRPPIVVLVICPTRE 351

Query: 365  LASQAAAEANKLLKYHPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTP 544
            LASQAAAEAN LLKYHPS+GVQVVIGGTRL LEQKRMQ NPCQILVATPGRLKDHIENT 
Sbjct: 352  LASQAAAEANTLLKYHPSLGVQVVIGGTRLALEQKRMQANPCQILVATPGRLKDHIENTA 411

Query: 545  GFATRLMGVKALVLDEADHLLDMGFRKDIERIIAAVPKQRQTLMFSATVPQEVRQICHVA 724
            GFATRLMGVK LVLDEADHLLDMGFRKDIE+IIAAVPKQRQTL+FSATVP+EVRQICH+A
Sbjct: 412  GFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLLFSATVPEEVRQICHIA 471

Query: 725  LKRDHEFIDTV-KGSEDTHAQVTQTH 799
            LKRDHEFI+TV +GSE+TH+QV QTH
Sbjct: 472  LKRDHEFINTVQEGSEETHSQVRQTH 497


>emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]
          Length = 863

 Score =  431 bits (1109), Expect = e-119
 Identities = 220/266 (82%), Positives = 240/266 (90%), Gaps = 1/266 (0%)
 Frame = +2

Query: 5    KNASSFSRMEIEDSPTASPKSSPGGSDSYLSETRFDQCSVSSASLKAIKDAGYDKMTVVQ 184
            KNASS      ++   A P+SS G SDSYLSETRFDQC +S  SLKAIKDAGY+KMTVVQ
Sbjct: 366  KNASSLFGAAAKE---AVPRSSTGKSDSYLSETRFDQCPISPLSLKAIKDAGYEKMTVVQ 422

Query: 185  AATLPVILKGKDVLAKARTGTGKTVAFLLPSIELVTKSPPVGHDQKRPPILVLVVCPTRE 364
             ATLPVILKGKDVLAKA+TGTGKTVAFLLPSIE++ KSPP+  DQKRPPI+VLV+CPTRE
Sbjct: 423  EATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEILVKSPPISRDQKRPPIVVLVICPTRE 482

Query: 365  LASQAAAEANKLLKYHPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTP 544
            LASQAAAEAN LLKYHPS+GVQVVIGGTRL LEQKRMQ NPCQILVATPGRLKDHIENT 
Sbjct: 483  LASQAAAEANTLLKYHPSLGVQVVIGGTRLALEQKRMQANPCQILVATPGRLKDHIENTA 542

Query: 545  GFATRLMGVKALVLDEADHLLDMGFRKDIERIIAAVPKQRQTLMFSATVPQEVRQICHVA 724
            GFATRLMGVK LVLDEADHLLDMGFRKDIE+IIAAVPKQRQTL+FSATVP+EVRQICH+A
Sbjct: 543  GFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLLFSATVPEEVRQICHIA 602

Query: 725  LKRDHEFIDTV-KGSEDTHAQVTQTH 799
            LKRDHEFI+TV +GSE+TH+QV QTH
Sbjct: 603  LKRDHEFINTVQEGSEETHSQVRQTH 628


>ref|XP_003529893.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine
           max]
          Length = 703

 Score =  422 bits (1085), Expect = e-116
 Identities = 210/252 (83%), Positives = 229/252 (90%), Gaps = 1/252 (0%)
 Frame = +2

Query: 47  PTASPKSSPGGSDSYLSETRFDQCSVSSASLKAIKDAGYDKMTVVQAATLPVILKGKDVL 226
           PT  P S  GGSDSYLSETRFDQCS+S  SLK +KDAGY+KMTVVQ ATLPVILKGKDVL
Sbjct: 216 PTPRPSSPGGGSDSYLSETRFDQCSISPLSLKGVKDAGYEKMTVVQEATLPVILKGKDVL 275

Query: 227 AKARTGTGKTVAFLLPSIELVTKSPPVGHDQKRPPILVLVVCPTRELASQAAAEANKLLK 406
           AKA+TGTGKTVAFLLPSIE+V KSPP   D +RPPI VLV+CPTRELASQAAAEA KLLK
Sbjct: 276 AKAKTGTGKTVAFLLPSIEVVAKSPPSDRDHRRPPIAVLVICPTRELASQAAAEATKLLK 335

Query: 407 YHPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLMGVKALVL 586
           YHP+IGVQVVIGGTRL LEQKRMQ NPCQILVATPGRL+DH ENT GFATRLMGVK LVL
Sbjct: 336 YHPTIGVQVVIGGTRLALEQKRMQANPCQILVATPGRLRDHTENTAGFATRLMGVKVLVL 395

Query: 587 DEADHLLDMGFRKDIERIIAAVPKQRQTLMFSATVPQEVRQICHVALKRDHEFIDTV-KG 763
           DEADHLLDMGFRKDIE+IIAAVPKQRQTLMFSATVP+EVRQ+CH+AL+RDHEFI+TV +G
Sbjct: 396 DEADHLLDMGFRKDIEKIIAAVPKQRQTLMFSATVPEEVRQVCHIALRRDHEFINTVQEG 455

Query: 764 SEDTHAQVTQTH 799
           +E+TH+QV QTH
Sbjct: 456 TEETHSQVCQTH 467


>ref|XP_003548422.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine max]
          Length = 806

 Score =  422 bits (1084), Expect = e-116
 Identities = 210/252 (83%), Positives = 229/252 (90%), Gaps = 1/252 (0%)
 Frame = +2

Query: 47   PTASPKSSPGGSDSYLSETRFDQCSVSSASLKAIKDAGYDKMTVVQAATLPVILKGKDVL 226
            PT  P S  GGSDSYLSETRFDQCS+S  SLK +KDAGY+KMTVVQ ATLPVILKGKDVL
Sbjct: 319  PTPRPSSPGGGSDSYLSETRFDQCSISPLSLKGVKDAGYEKMTVVQEATLPVILKGKDVL 378

Query: 227  AKARTGTGKTVAFLLPSIELVTKSPPVGHDQKRPPILVLVVCPTRELASQAAAEANKLLK 406
            AKA+TGTGKTVAFLLPSIE+V KSPP   D +RPPI VLV+CPTRELASQAAAEA KLLK
Sbjct: 379  AKAKTGTGKTVAFLLPSIEVVAKSPPSDRDHRRPPISVLVICPTRELASQAAAEATKLLK 438

Query: 407  YHPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLMGVKALVL 586
            YHP+IGVQVVIGGTRL LEQKRMQ NPCQILVATPGRL+DH ENT GFATRLMGVK LVL
Sbjct: 439  YHPTIGVQVVIGGTRLALEQKRMQANPCQILVATPGRLRDHTENTAGFATRLMGVKVLVL 498

Query: 587  DEADHLLDMGFRKDIERIIAAVPKQRQTLMFSATVPQEVRQICHVALKRDHEFIDTV-KG 763
            DEADHLLDMGFRKDIE+IIAAVPKQRQTLMFSATVP+EVRQ+CH+AL+RDHEFI+TV +G
Sbjct: 499  DEADHLLDMGFRKDIEKIIAAVPKQRQTLMFSATVPEEVRQVCHIALRRDHEFINTVQEG 558

Query: 764  SEDTHAQVTQTH 799
            +E+TH+QV QTH
Sbjct: 559  TEETHSQVRQTH 570


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