BLASTX nr result

ID: Bupleurum21_contig00002699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002699
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002894050.1| hypothetical protein ARALYDRAFT_473889 [Arab...    66   3e-09
ref|NP_564506.1| succinate dehydrogenase 5 [Arabidopsis thaliana...    65   5e-09
gb|ABK96322.1| unknown [Populus trichocarpa x Populus deltoides]       64   2e-08
ref|XP_002326924.1| predicted protein [Populus trichocarpa] gi|1...    64   2e-08
gb|AAL77110.1| unknown [Hordeum vulgare subsp. vulgare]                57   1e-06

>ref|XP_002894050.1| hypothetical protein ARALYDRAFT_473889 [Arabidopsis lyrata subsp.
           lyrata] gi|297339892|gb|EFH70309.1| hypothetical protein
           ARALYDRAFT_473889 [Arabidopsis lyrata subsp. lyrata]
          Length = 260

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = +2

Query: 410 EDVQIKNAIKDLLAADWSELPKAVTNNAKKELSKNTEDKAGQEILK 547
           +D  + NA KDL+AADW+ELP AV  NAK  +SKNT+DKAGQE LK
Sbjct: 103 KDSDVLNAFKDLMAADWAELPSAVVRNAKSAISKNTDDKAGQEALK 148


>ref|NP_564506.1| succinate dehydrogenase 5 [Arabidopsis thaliana]
           gi|25091506|sp|Q9SX77.1|UMP6_ARATH RecName:
           Full=Uncharacterized protein At1g47420, mitochondrial;
           Flags: Precursor gi|5668814|gb|AAD46040.1|AC007519_25
           ESTs gb|H36253 and gb|AA04251 come from this gene
           [Arabidopsis thaliana]
           gi|12744995|gb|AAK06877.1|AF344326_1 unknown protein
           [Arabidopsis thaliana] gi|14334512|gb|AAK59453.1|
           unknown protein [Arabidopsis thaliana]
           gi|15450966|gb|AAK96754.1| Unknown protein [Arabidopsis
           thaliana] gi|17104551|gb|AAL34164.1| unknown protein
           [Arabidopsis thaliana] gi|21536627|gb|AAM60959.1|
           unknown [Arabidopsis thaliana]
           gi|23198274|gb|AAN15664.1| Unknown protein [Arabidopsis
           thaliana] gi|332194047|gb|AEE32168.1| succinate
           dehydrogenase 5 [Arabidopsis thaliana]
          Length = 257

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = +2

Query: 410 EDVQIKNAIKDLLAADWSELPKAVTNNAKKELSKNTEDKAGQEILK 547
           ED  + NA KDL+AADW+ELP AV  +AK  +SKNT+DKAGQE LK
Sbjct: 100 EDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALK 145


>gb|ABK96322.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 239

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/46 (63%), Positives = 37/46 (80%)
 Frame = +2

Query: 410 EDVQIKNAIKDLLAADWSELPKAVTNNAKKELSKNTEDKAGQEILK 547
           +D +I N  KDL+A +W ELP AV ++AKK LSKNT+DKAGQ+ILK
Sbjct: 82  KDPEILNVFKDLMATNWDELPNAVVSDAKKALSKNTDDKAGQDILK 127


>ref|XP_002326924.1| predicted protein [Populus trichocarpa] gi|118481849|gb|ABK92861.1|
           unknown [Populus trichocarpa]
           gi|222835239|gb|EEE73674.1| predicted protein [Populus
           trichocarpa]
          Length = 239

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = +2

Query: 410 EDVQIKNAIKDLLAADWSELPKAVTNNAKKELSKNTEDKAGQEILK 547
           +D +I N  KDL+A +W ELP AV ++AKK LSKNT+DK GQEILK
Sbjct: 82  KDPEILNVFKDLMATNWDELPNAVVSDAKKALSKNTDDKVGQEILK 127


>gb|AAL77110.1| unknown [Hordeum vulgare subsp. vulgare]
          Length = 245

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = +2

Query: 413 DVQIKNAIKDLLAADWSELPKAVTNNAKKELSKNTEDKAGQEILK 547
           D +I+ A KDL+AA W+ELP ++   AKKE+SK T+DKAGQE L+
Sbjct: 89  DPEIETAFKDLMAASWNELPGSLVEEAKKEVSKATDDKAGQEALE 133


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