BLASTX nr result

ID: Bupleurum21_contig00002695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002695
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285762.1| PREDICTED: uncharacterized protein LOC100259...   397   e-108
ref|XP_002301062.1| predicted protein [Populus trichocarpa] gi|2...   390   e-106
gb|ABK93831.1| unknown [Populus trichocarpa] gi|118487520|gb|ABK...   390   e-106
ref|XP_003526575.1| PREDICTED: uncharacterized protein LOC100794...   385   e-105
ref|XP_002513943.1| conserved hypothetical protein [Ricinus comm...   384   e-104

>ref|XP_002285762.1| PREDICTED: uncharacterized protein LOC100259041 [Vitis vinifera]
           gi|147765766|emb|CAN68978.1| hypothetical protein
           VITISV_040774 [Vitis vinifera]
          Length = 319

 Score =  397 bits (1020), Expect = e-108
 Identities = 196/277 (70%), Positives = 221/277 (79%), Gaps = 2/277 (0%)
 Frame = +3

Query: 6   FVVLFTICNVTFATRTLKELVEDQPNLLQYHKGPLLAGNISVNLIWYGKFKPSQRAXXXX 185
           F+ + ++ +V++A R L ELV+ QP LL+YH GPLL+G IS+NLIWYGKFKPSQRA    
Sbjct: 13  FLFVISLFHVSYAARKLNELVQQQPLLLEYHNGPLLSGKISINLIWYGKFKPSQRAIVSD 72

Query: 186 XXXXXXXXXXTQ--PSVQTWWKTTEKYYHLANSKNKRSTKHPSLSLGKQILDTTYSLGKS 359
                     +Q  PSV TWWKTTEKYYHL  SKN  S K   LSLG+QILD TYSLGKS
Sbjct: 73  FITSLSSSSLSQDQPSVATWWKTTEKYYHLT-SKNPSSLK---LSLGEQILDETYSLGKS 128

Query: 360 LSDEQIVALASKGGDRNAVNVVLTASDVAVAGFCRNRCGTHGASSSKKGNVKATKNYRFA 539
           L+ +QIV LASKG   NA+NVVLT+SDVAV GFC +RCGTHG+SSS K      KNY+FA
Sbjct: 129 LTGKQIVQLASKGEQMNAINVVLTSSDVAVEGFCSSRCGTHGSSSSSKNVQVKGKNYKFA 188

Query: 540 YIWVGNSDTQCPGHCAWPFHQPVYGPQVAPLVAPNNDVGLDGMVINLASLLAGTATNPFG 719
           Y+WVGNS+TQCPG CAWPFHQP+YGPQ  PLVAPNNDVGLDG+VINLASLLAGTATNPFG
Sbjct: 189 YVWVGNSETQCPGQCAWPFHQPIYGPQSPPLVAPNNDVGLDGIVINLASLLAGTATNPFG 248

Query: 720 NGYYQGSAEAPLEVASACPGVYAKGAYPGYAGDLLVD 830
           NGY+QG AEAPLE ASACPGVY KGAYPGYAGDLLVD
Sbjct: 249 NGYFQGPAEAPLEAASACPGVYGKGAYPGYAGDLLVD 285


>ref|XP_002301062.1| predicted protein [Populus trichocarpa] gi|222842788|gb|EEE80335.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score =  390 bits (1001), Expect = e-106
 Identities = 194/279 (69%), Positives = 218/279 (78%), Gaps = 5/279 (1%)
 Frame = +3

Query: 9   VVLFTICNVTFATRTLKELVEDQPNLLQYHKGPLLAGNISVNLIWYGKFKPSQRAXXXXX 188
           ++L  + +V+FA R L ELV+DQP LL+YH G LL G ISVNLIWYGKFKPSQRA     
Sbjct: 13  LLLVCLFHVSFAARKLNELVQDQPQLLRYHDGALLYGKISVNLIWYGKFKPSQRAIISDF 72

Query: 189 XXXXXXXXXT----QPSVQTWWKTTEKYYHLANSKNKRSTKHPSLSLGKQILDTTYSLGK 356
                    +    QPSV  WW+TTEKYYHL + KN  S     L+LG QILD  YSLGK
Sbjct: 73  VTSLSVSPSSLKDSQPSVAKWWETTEKYYHLTSKKNTLS-----LTLGTQILDAKYSLGK 127

Query: 357 SLSDEQIVALASKGGDRNAVNVVLTASDVAVAGFCRNRCGTHGAS-SSKKGNVKATKNYR 533
           SL+D+QIV LASKG  ++AVN+VLT+SDV V GFC NRCGTHG++  SK GN+K  KNYR
Sbjct: 128 SLTDKQIVELASKGDQKDAVNIVLTSSDVTVEGFCLNRCGTHGSALGSKSGNIKG-KNYR 186

Query: 534 FAYIWVGNSDTQCPGHCAWPFHQPVYGPQVAPLVAPNNDVGLDGMVINLASLLAGTATNP 713
           FAYIWVGNS+TQCPG+CAWPFHQP+YGPQ  PLVAPNNDVGLDGMVINLASL+AGTATNP
Sbjct: 187 FAYIWVGNSETQCPGYCAWPFHQPIYGPQNPPLVAPNNDVGLDGMVINLASLMAGTATNP 246

Query: 714 FGNGYYQGSAEAPLEVASACPGVYAKGAYPGYAGDLLVD 830
           FGNGYYQG  EAPLE ASACPGVY KGAYPGYAG LLVD
Sbjct: 247 FGNGYYQGPKEAPLEAASACPGVYGKGAYPGYAGSLLVD 285


>gb|ABK93831.1| unknown [Populus trichocarpa] gi|118487520|gb|ABK95587.1| unknown
           [Populus trichocarpa]
          Length = 319

 Score =  390 bits (1001), Expect = e-106
 Identities = 194/279 (69%), Positives = 218/279 (78%), Gaps = 5/279 (1%)
 Frame = +3

Query: 9   VVLFTICNVTFATRTLKELVEDQPNLLQYHKGPLLAGNISVNLIWYGKFKPSQRAXXXXX 188
           ++L  + +V+FA R L ELV+DQP LL+YH G LL G ISVNLIWYGKFKPSQRA     
Sbjct: 13  LLLVCLFHVSFAARKLNELVQDQPQLLRYHDGALLYGKISVNLIWYGKFKPSQRAIISDF 72

Query: 189 XXXXXXXXXT----QPSVQTWWKTTEKYYHLANSKNKRSTKHPSLSLGKQILDTTYSLGK 356
                    +    QPSV  WW+TTEKYYHL + KN  S     L+LG QILD  YSLGK
Sbjct: 73  VTSLSVSPSSLKDSQPSVAKWWETTEKYYHLTSKKNTLS-----LTLGTQILDAKYSLGK 127

Query: 357 SLSDEQIVALASKGGDRNAVNVVLTASDVAVAGFCRNRCGTHGAS-SSKKGNVKATKNYR 533
           SL+D+QIV LASKG  ++AVN+VLT+SDV V GFC NRCGTHG++  SK GN+K  KNYR
Sbjct: 128 SLTDKQIVELASKGDQKDAVNIVLTSSDVTVEGFCLNRCGTHGSALGSKSGNIKG-KNYR 186

Query: 534 FAYIWVGNSDTQCPGHCAWPFHQPVYGPQVAPLVAPNNDVGLDGMVINLASLLAGTATNP 713
           FAYIWVGNS+TQCPG+CAWPFHQP+YGPQ  PLVAPNNDVGLDGMVINLASL+AGTATNP
Sbjct: 187 FAYIWVGNSETQCPGYCAWPFHQPIYGPQNPPLVAPNNDVGLDGMVINLASLMAGTATNP 246

Query: 714 FGNGYYQGSAEAPLEVASACPGVYAKGAYPGYAGDLLVD 830
           FGNGYYQG  EAPLE ASACPGVY KGAYPGYAG LLVD
Sbjct: 247 FGNGYYQGPKEAPLEAASACPGVYGKGAYPGYAGSLLVD 285


>ref|XP_003526575.1| PREDICTED: uncharacterized protein LOC100794117 [Glycine max]
          Length = 324

 Score =  385 bits (990), Expect = e-105
 Identities = 191/280 (68%), Positives = 219/280 (78%), Gaps = 6/280 (2%)
 Frame = +3

Query: 9   VVLFTICNVTFATRTLKELVEDQPNLLQYHKGPLLAGNISVNLIWYGKFKPSQRAXXXXX 188
           ++L ++  ++FA R L +LV+DQ  LL YH GPLL G I+VNLIWYG FKPSQ+A     
Sbjct: 14  LLLISVFQLSFAARRLNQLVQDQSQLLHYHNGPLLYGKIAVNLIWYGHFKPSQKAIITDF 73

Query: 189 XXXXXXXXX--TQPSVQTWWKTTEKYYHLANSKNKRSTKHPSLSLGKQILDTTYSLGKSL 362
                      +QPSV TWWKTTEKYYHL+  KNK++    SLSLG Q LD  +SLGKSL
Sbjct: 74  VTSLSSPSSQSSQPSVATWWKTTEKYYHLS-PKNKKAASSLSLSLGDQFLDEGFSLGKSL 132

Query: 363 SDEQIVALASKGGDRNAVNVVLTASDVAVAGFCRNRCGTHGASSS----KKGNVKATKNY 530
           + + +V LASKGG RNA+NVVLT++DVAV GFC +RCGTHG+SSS    KK N    KNY
Sbjct: 133 TSKNLVELASKGGQRNAINVVLTSADVAVEGFCMSRCGTHGSSSSASHVKKNN--NGKNY 190

Query: 531 RFAYIWVGNSDTQCPGHCAWPFHQPVYGPQVAPLVAPNNDVGLDGMVINLASLLAGTATN 710
           +FAYIWVGNS+TQCPG CAWPFHQP+YGPQ  PLVAPNNDVGLDGMVINLASLLAGTATN
Sbjct: 191 KFAYIWVGNSETQCPGQCAWPFHQPIYGPQSPPLVAPNNDVGLDGMVINLASLLAGTATN 250

Query: 711 PFGNGYYQGSAEAPLEVASACPGVYAKGAYPGYAGDLLVD 830
           PFGNGY+QG AEAPLE ASACPGVY KGAYPGYAG+LLVD
Sbjct: 251 PFGNGYFQGPAEAPLEAASACPGVYGKGAYPGYAGNLLVD 290


>ref|XP_002513943.1| conserved hypothetical protein [Ricinus communis]
           gi|223547029|gb|EEF48526.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 317

 Score =  384 bits (987), Expect = e-104
 Identities = 190/276 (68%), Positives = 220/276 (79%), Gaps = 3/276 (1%)
 Frame = +3

Query: 12  VLFTICNVTFATRTLKELVEDQPNLLQYHKGPLLAGNISVNLIWYGKFKPSQRAXXXXXX 191
           +L +I  ++ A R L ELV+DQP LL+YH GPLL+G IS+NLIWYGKF+PSQ+A      
Sbjct: 14  ILISIFQISLAARKLNELVQDQPQLLRYHNGPLLSGKISINLIWYGKFQPSQKAIISDFI 73

Query: 192 XXXXXXXX--TQPSVQTWWKTTEKYYHLANSKNKRSTKHPSLSLGKQILDTTYSLGKSLS 365
                     +QPSV +WWKTTEKYYHL    +K++T   SL+LGKQI+D  YSLGKSL+
Sbjct: 74  SSLSEHQSQNSQPSVASWWKTTEKYYHL---NSKKATL--SLTLGKQIVDEAYSLGKSLT 128

Query: 366 DEQIVALASKGGDRNAVNVVLTASDVAVAGFCRNRCGTHG-ASSSKKGNVKATKNYRFAY 542
           +E IV LASKG   NA+NVVLT++DVAV GFC NRCGTHG AS SK G++K  KNY+FAY
Sbjct: 129 NEHIVELASKGDKMNAINVVLTSADVAVDGFCLNRCGTHGSASGSKTGHIKG-KNYKFAY 187

Query: 543 IWVGNSDTQCPGHCAWPFHQPVYGPQVAPLVAPNNDVGLDGMVINLASLLAGTATNPFGN 722
           IWVGNS+ QCPG+CAWPFHQP+YGPQ  PLVAPNNDVGLDGMVINLA LLAGTATNPFGN
Sbjct: 188 IWVGNSEIQCPGYCAWPFHQPIYGPQNQPLVAPNNDVGLDGMVINLAGLLAGTATNPFGN 247

Query: 723 GYYQGSAEAPLEVASACPGVYAKGAYPGYAGDLLVD 830
           GY+QG  EAPLE ASACPGVY KGAYPGYAG+LLVD
Sbjct: 248 GYFQGPKEAPLEAASACPGVYGKGAYPGYAGNLLVD 283


Top