BLASTX nr result

ID: Bupleurum21_contig00002666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002666
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83835.1| hypothetical protein VITISV_009604 [Vitis vinifera]   177   1e-42
ref|XP_002269322.1| PREDICTED: uncharacterized protein At4g22758...   174   7e-42
gb|ABB87098.1| hypothetical protein [Solanum tuberosum]               169   2e-40
emb|CAC09928.1| hypothetical protein [Catharanthus roseus]            166   2e-39
ref|XP_002328077.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39

>emb|CAN83835.1| hypothetical protein VITISV_009604 [Vitis vinifera]
          Length = 197

 Score =  177 bits (448), Expect = 1e-42
 Identities = 93/140 (66%), Positives = 112/140 (80%), Gaps = 1/140 (0%)
 Frame = -2

Query: 419 KNNRKGRVSEKASSFHGRTQETMTV-AKLNRPRTVPDLLAGKRVAVGSPSEVKPAKLTKL 243
           + NRKGR+++++SSFH     TM   A+L RP+T+PDLL+G+R   G   E  P +LTKL
Sbjct: 13  EKNRKGRLAQRSSSFHSGIPMTMAPQAELRRPKTLPDLLSGRRSVSGLSPEGGP-RLTKL 71

Query: 242 LLNVTVQRSLGPVMVIMSPESMVGDLIAAVLRQYAKEGRRPIIGTDNCAAFDLHYSQFSL 63
           LLNVTVQRSLGPV V+MSP+S VGDLIAAVLRQYAKEGRR ++ T + A FDLHYSQFSL
Sbjct: 72  LLNVTVQRSLGPVQVVMSPDSTVGDLIAAVLRQYAKEGRRLVLPTTDPAGFDLHYSQFSL 131

Query: 62  ESLDREEKLINLGSRNFFMC 3
           ESLDR EKL+ LGSRNFF+C
Sbjct: 132 ESLDRNEKLMTLGSRNFFLC 151


>ref|XP_002269322.1| PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera]
          Length = 196

 Score =  174 bits (441), Expect = 7e-42
 Identities = 94/140 (67%), Positives = 114/140 (81%), Gaps = 1/140 (0%)
 Frame = -2

Query: 419 KNNRKGRVSEKASSFHGRTQETMTV-AKLNRPRTVPDLLAGKRVAVGSPSEVKPAKLTKL 243
           + NRKGR+++++SSFH     TM   A+L RP+T+PDLL+G+ V+  SP E  P +LTKL
Sbjct: 13  EKNRKGRLAQRSSSFHSGIPMTMAPQAELRRPKTLPDLLSGRSVSGLSP-EGGP-RLTKL 70

Query: 242 LLNVTVQRSLGPVMVIMSPESMVGDLIAAVLRQYAKEGRRPIIGTDNCAAFDLHYSQFSL 63
           LLNVTVQRSLGPV V+MSP+S VGDLIAAVLRQYAKEGRR ++ T + A FDLHYSQFSL
Sbjct: 71  LLNVTVQRSLGPVQVVMSPDSTVGDLIAAVLRQYAKEGRRLVLPTTDPAGFDLHYSQFSL 130

Query: 62  ESLDREEKLINLGSRNFFMC 3
           ESLDR EKL+ LGSRNFF+C
Sbjct: 131 ESLDRNEKLMTLGSRNFFLC 150


>gb|ABB87098.1| hypothetical protein [Solanum tuberosum]
          Length = 190

 Score =  169 bits (429), Expect = 2e-40
 Identities = 88/141 (62%), Positives = 107/141 (75%), Gaps = 2/141 (1%)
 Frame = -2

Query: 419 KNNRKGRVSEKASSFHGRTQETMTVAKLNRPRTVPDLLAGKRVAVGSPSEVK--PAKLTK 246
           KN +  R+SEK+ SFHG+   +     L RP+TVPDLLAG R + G  + VK  P KLTK
Sbjct: 15  KNRKDMRLSEKSKSFHGQISGSSKTEVLRRPKTVPDLLAGGRNSAGESTAVKIRPMKLTK 74

Query: 245 LLLNVTVQRSLGPVMVIMSPESMVGDLIAAVLRQYAKEGRRPIIGTDNCAAFDLHYSQFS 66
           LLLNVT+QRS+GPV V++S ES V DLIAA LRQY+KEGRRP++ + + A +DLHYSQFS
Sbjct: 75  LLLNVTIQRSVGPVQVLISLESTVADLIAAALRQYSKEGRRPVLSSVDAADYDLHYSQFS 134

Query: 65  LESLDREEKLINLGSRNFFMC 3
           LESL+REE L  LGSRNFFMC
Sbjct: 135 LESLEREENLNALGSRNFFMC 155


>emb|CAC09928.1| hypothetical protein [Catharanthus roseus]
          Length = 196

 Score =  166 bits (420), Expect = 2e-39
 Identities = 92/146 (63%), Positives = 111/146 (76%), Gaps = 7/146 (4%)
 Frame = -2

Query: 419 KNNRKGRVSEKASSFH-----GRTQETMTVAKLNRPRTVPDLLAG-KRVAVGSPS-EVKP 261
           + NRKGR++EKA SFH     G   ETM    LNRPRTVP+LL+G K V   SP  + +P
Sbjct: 17  EKNRKGRLAEKALSFHAGTSVGNAAETML---LNRPRTVPNLLSGGKFVDKTSPEFQFQP 73

Query: 260 AKLTKLLLNVTVQRSLGPVMVIMSPESMVGDLIAAVLRQYAKEGRRPIIGTDNCAAFDLH 81
            KLTKLLLNVT+  S+GP+ V+ SPE+ V DLI+A LRQY+KEGRRPI+ + + A FDLH
Sbjct: 74  PKLTKLLLNVTIMGSVGPIQVLTSPEATVEDLISAALRQYSKEGRRPILKSTDAAGFDLH 133

Query: 80  YSQFSLESLDREEKLINLGSRNFFMC 3
           YSQFSLESL REEKLI+LGSRNFF+C
Sbjct: 134 YSQFSLESLHREEKLISLGSRNFFLC 159


>ref|XP_002328077.1| predicted protein [Populus trichocarpa] gi|222837592|gb|EEE75957.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  165 bits (418), Expect = 3e-39
 Identities = 85/139 (61%), Positives = 111/139 (79%)
 Frame = -2

Query: 419 KNNRKGRVSEKASSFHGRTQETMTVAKLNRPRTVPDLLAGKRVAVGSPSEVKPAKLTKLL 240
           + NRK R++ KASSFHG+    +  A++ RP+T+PDLLAG+ +   +P EV+P KLTK+L
Sbjct: 17  ERNRKNRLTAKASSFHGKIPAEIPEARIRRPKTLPDLLAGRNLTAKAP-EVRP-KLTKVL 74

Query: 239 LNVTVQRSLGPVMVIMSPESMVGDLIAAVLRQYAKEGRRPIIGTDNCAAFDLHYSQFSLE 60
           +NVTVQ S+G V V+MSPES VG+LI+A ++QY KEGRRPII  D  + F+LHYSQFSLE
Sbjct: 75  VNVTVQGSVGAVQVLMSPESTVGELISAAIQQYKKEGRRPIIAND--SRFNLHYSQFSLE 132

Query: 59  SLDREEKLINLGSRNFFMC 3
           SLDREEK++ LGSRNFF+C
Sbjct: 133 SLDREEKVMALGSRNFFLC 151


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