BLASTX nr result

ID: Bupleurum21_contig00002636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002636
         (1739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis v...   570   e-160
emb|CBI19930.3| unnamed protein product [Vitis vinifera]              570   e-160
ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|2...   558   e-156
ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus ...   556   e-156
ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|2...   541   e-151

>ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis vinifera]
          Length = 370

 Score =  570 bits (1470), Expect = e-160
 Identities = 275/367 (74%), Positives = 310/367 (84%)
 Frame = +1

Query: 430  EMVGEGELKNEKLDLSFQKLXXXXXXXXXXXXXXXXXINEWKDIPMELLLRIVSLVDDRT 609
            EMVG+G    E+L+  F++L                 I EWKD+PMELLLRIV+LVDDRT
Sbjct: 2    EMVGQG---GEELEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRT 58

Query: 610  AIVASGVCSGWRDAVCWGLTRLSLTWCKKNMNNLVLSLTPKFSKLQVLILRQDTSQLQDK 789
             I+ASGVCSGWRDA+C GLT LSL+WCK NMNNLVLSL PKF+KLQ L LRQD  QL+DK
Sbjct: 59   VIMASGVCSGWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDK 118

Query: 790  AVETIANFCHDLQDLDLSKSFQLTDRSLYALAHGCPNLTKLNISGCSAFSDAALAYLSGF 969
            AVE IAN+CHDLQDLDLSKSF+L+D SLYALAHGCPNLTKLNISGC+AFSDAALA+L+ F
Sbjct: 119  AVEIIANYCHDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSF 178

Query: 970  CRKLKTLNLCGCTKAASDSALKAIGYNCTQLQYLNLGWCENVGDTGVMSLAYGCPDLRIL 1149
            CR+LK LNLCGC KAAS+ AL+AIG NC+QLQ LNLGWCE+V D GVMSLAYGCPDLR L
Sbjct: 179  CRRLKILNLCGCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMSLAYGCPDLRAL 238

Query: 1150 DLCGCVLITDASVVALANNCLHLQSLGLYFCQNITDRAIYALAHSRVKNKQSVWESVKNR 1329
            DLCGCV ITD SV+ALAN CLHL+SLGLYFCQNITD+A+Y+LA SRVKNK  +WES+K+R
Sbjct: 239  DLCGCVHITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSR 298

Query: 1330 YEEEGLKNLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACAVQA 1509
            Y EEGL NLNISQCTALTPPAVQA+CDS PALHTCPGRHSLIISGCL+LTSVHCAC VQA
Sbjct: 299  YSEEGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQA 358

Query: 1510 HRATNNV 1530
            HR  + +
Sbjct: 359  HRTASQL 365


>emb|CBI19930.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  570 bits (1470), Expect = e-160
 Identities = 275/367 (74%), Positives = 310/367 (84%)
 Frame = +1

Query: 430  EMVGEGELKNEKLDLSFQKLXXXXXXXXXXXXXXXXXINEWKDIPMELLLRIVSLVDDRT 609
            EMVG+G    E+L+  F++L                 I EWKD+PMELLLRIV+LVDDRT
Sbjct: 60   EMVGQG---GEELEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRT 116

Query: 610  AIVASGVCSGWRDAVCWGLTRLSLTWCKKNMNNLVLSLTPKFSKLQVLILRQDTSQLQDK 789
             I+ASGVCSGWRDA+C GLT LSL+WCK NMNNLVLSL PKF+KLQ L LRQD  QL+DK
Sbjct: 117  VIMASGVCSGWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDK 176

Query: 790  AVETIANFCHDLQDLDLSKSFQLTDRSLYALAHGCPNLTKLNISGCSAFSDAALAYLSGF 969
            AVE IAN+CHDLQDLDLSKSF+L+D SLYALAHGCPNLTKLNISGC+AFSDAALA+L+ F
Sbjct: 177  AVEIIANYCHDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSF 236

Query: 970  CRKLKTLNLCGCTKAASDSALKAIGYNCTQLQYLNLGWCENVGDTGVMSLAYGCPDLRIL 1149
            CR+LK LNLCGC KAAS+ AL+AIG NC+QLQ LNLGWCE+V D GVMSLAYGCPDLR L
Sbjct: 237  CRRLKILNLCGCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMSLAYGCPDLRAL 296

Query: 1150 DLCGCVLITDASVVALANNCLHLQSLGLYFCQNITDRAIYALAHSRVKNKQSVWESVKNR 1329
            DLCGCV ITD SV+ALAN CLHL+SLGLYFCQNITD+A+Y+LA SRVKNK  +WES+K+R
Sbjct: 297  DLCGCVHITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSR 356

Query: 1330 YEEEGLKNLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACAVQA 1509
            Y EEGL NLNISQCTALTPPAVQA+CDS PALHTCPGRHSLIISGCL+LTSVHCAC VQA
Sbjct: 357  YSEEGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQA 416

Query: 1510 HRATNNV 1530
            HR  + +
Sbjct: 417  HRTASQL 423


>ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|222856121|gb|EEE93668.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  558 bits (1438), Expect = e-156
 Identities = 268/365 (73%), Positives = 305/365 (83%)
 Frame = +1

Query: 433  MVGEGELKNEKLDLSFQKLXXXXXXXXXXXXXXXXXINEWKDIPMELLLRIVSLVDDRTA 612
            M GEG+ ++E L+L F+KL                 I EWKDIP+ELLLRIVSLVDDRT 
Sbjct: 1    MAGEGKARSEDLNLCFEKLMMLAFGGAV--------ITEWKDIPVELLLRIVSLVDDRTV 52

Query: 613  IVASGVCSGWRDAVCWGLTRLSLTWCKKNMNNLVLSLTPKFSKLQVLILRQDTSQLQDKA 792
            I+ASGVCSGWRDA+C GLT L L+WCK NMNNLVLSL PKF+KLQ L+LRQD  QL+D A
Sbjct: 53   IMASGVCSGWRDAICMGLTHLCLSWCKNNMNNLVLSLAPKFTKLQTLVLRQDKPQLEDHA 112

Query: 793  VETIANFCHDLQDLDLSKSFQLTDRSLYALAHGCPNLTKLNISGCSAFSDAALAYLSGFC 972
            VETIA++CHDLQDLDLSKSF+L+D SLYALAHGCPNLTKLNISGC+AFSD  L YL+ FC
Sbjct: 113  VETIASYCHDLQDLDLSKSFKLSDLSLYALAHGCPNLTKLNISGCTAFSDDGLEYLTEFC 172

Query: 973  RKLKTLNLCGCTKAASDSALKAIGYNCTQLQYLNLGWCENVGDTGVMSLAYGCPDLRILD 1152
            +KLK LNLCGC K A+D AL+ IG NC+QLQ LNLGWCENVGD GVMSLAYGCPDLR LD
Sbjct: 173  QKLKFLNLCGCVKGATDRALQGIGRNCSQLQTLNLGWCENVGDVGVMSLAYGCPDLRTLD 232

Query: 1153 LCGCVLITDASVVALANNCLHLQSLGLYFCQNITDRAIYALAHSRVKNKQSVWESVKNRY 1332
            LCGCV ITD SV+ALAN C HL+SLGLY+C+NITDRA+Y+L H+RVKNK S+WES+K R 
Sbjct: 233  LCGCVCITDDSVIALANRCPHLRSLGLYYCRNITDRAMYSLVHNRVKNKLSMWESMKGRC 292

Query: 1333 EEEGLKNLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACAVQAH 1512
            +EEGL  LNISQCTALTPPAVQALCDS PALHTC GRHSL++SGCLNLTSVHC CAVQAH
Sbjct: 293  DEEGLSRLNISQCTALTPPAVQALCDSFPALHTCSGRHSLVMSGCLNLTSVHCVCAVQAH 352

Query: 1513 RATNN 1527
            R+ ++
Sbjct: 353  RSASS 357


>ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus communis]
            gi|223540477|gb|EEF42044.1| F-box/LRR-repeat protein,
            putative [Ricinus communis]
          Length = 373

 Score =  556 bits (1434), Expect = e-156
 Identities = 269/363 (74%), Positives = 304/363 (83%), Gaps = 2/363 (0%)
 Frame = +1

Query: 433  MVGEGELKNEKLDLSFQKLXXXXXXXXXXXXXXXXX--INEWKDIPMELLLRIVSLVDDR 606
            MVG G+L++E L+  F+KL                   I EWKDIPMELLLRIVSLVDDR
Sbjct: 1    MVGGGKLRSEDLNRCFEKLMMAGAAGNTEGRVKMEGVVITEWKDIPMELLLRIVSLVDDR 60

Query: 607  TAIVASGVCSGWRDAVCWGLTRLSLTWCKKNMNNLVLSLTPKFSKLQVLILRQDTSQLQD 786
            T I+ASGVCSGWRDA+C GLT L L+WCK +MNNLVL L PKF+KL+ L+LRQD  QL+D
Sbjct: 61   TIIMASGVCSGWRDAICLGLTHLCLSWCKNHMNNLVLWLAPKFTKLETLVLRQDKPQLED 120

Query: 787  KAVETIANFCHDLQDLDLSKSFQLTDRSLYALAHGCPNLTKLNISGCSAFSDAALAYLSG 966
             AVE IA +CHDL+DLDLSKSF+LTD SLYALAHGCPNLTKLNISGC++FSD  L YL+G
Sbjct: 121  NAVEAIARYCHDLEDLDLSKSFKLTDCSLYALAHGCPNLTKLNISGCTSFSDGGLEYLTG 180

Query: 967  FCRKLKTLNLCGCTKAASDSALKAIGYNCTQLQYLNLGWCENVGDTGVMSLAYGCPDLRI 1146
            FCRKLK LNLCGC KAA+D AL+AIG NC+QLQ LNLGWCENVGD GVMSLAYGCPDLR 
Sbjct: 181  FCRKLKILNLCGCVKAATDRALQAIGRNCSQLQSLNLGWCENVGDVGVMSLAYGCPDLRT 240

Query: 1147 LDLCGCVLITDASVVALANNCLHLQSLGLYFCQNITDRAIYALAHSRVKNKQSVWESVKN 1326
            LDLCGCV ITD SV+ALA  CLHL+SLGLY+C+NITDRA+Y+L HSRVKNK ++WESVK 
Sbjct: 241  LDLCGCVNITDDSVIALAYRCLHLRSLGLYYCRNITDRAMYSLVHSRVKNKPAMWESVKG 300

Query: 1327 RYEEEGLKNLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACAVQ 1506
            R +EEGL++LNISQCTALTPPAVQALCD  PALHTC GRHSL++SGCLNLTSVHCACAVQ
Sbjct: 301  RCDEEGLRSLNISQCTALTPPAVQALCDCFPALHTCSGRHSLVMSGCLNLTSVHCACAVQ 360

Query: 1507 AHR 1515
            AHR
Sbjct: 361  AHR 363


>ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|222843928|gb|EEE81475.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  541 bits (1395), Expect = e-151
 Identities = 254/330 (76%), Positives = 290/330 (87%)
 Frame = +1

Query: 541  INEWKDIPMELLLRIVSLVDDRTAIVASGVCSGWRDAVCWGLTRLSLTWCKKNMNNLVLS 720
            I EWKDIPM+LLLRIVSLVDDRT I+ASGVCSGWRDA+C GLT L L+WCK NMNNLVLS
Sbjct: 24   ITEWKDIPMKLLLRIVSLVDDRTLIMASGVCSGWRDAICSGLTHLCLSWCKNNMNNLVLS 83

Query: 721  LTPKFSKLQVLILRQDTSQLQDKAVETIANFCHDLQDLDLSKSFQLTDRSLYALAHGCPN 900
            L PKF+KLQ L+LRQD  QL+D AVETIA++CHDLQDLDLSKSF+L+D SLYALAHG PN
Sbjct: 84   LAPKFTKLQTLVLRQDKPQLEDNAVETIASYCHDLQDLDLSKSFKLSDLSLYALAHGFPN 143

Query: 901  LTKLNISGCSAFSDAALAYLSGFCRKLKTLNLCGCTKAASDSALKAIGYNCTQLQYLNLG 1080
            LTKLNISGC+AFSD +L YL+ FCRKLK LNLCGC   A+D AL+AIG NC+QLQ LNLG
Sbjct: 144  LTKLNISGCTAFSDVSLEYLTEFCRKLKILNLCGCVNGATDRALQAIGRNCSQLQSLNLG 203

Query: 1081 WCENVGDTGVMSLAYGCPDLRILDLCGCVLITDASVVALANNCLHLQSLGLYFCQNITDR 1260
            WCENV D GVMSLAYGCPD+R LDLCGCV ITD SV+ALAN C HL+SL LY+C+NITDR
Sbjct: 204  WCENVSDVGVMSLAYGCPDIRTLDLCGCVCITDDSVIALANRCPHLRSLCLYYCRNITDR 263

Query: 1261 AIYALAHSRVKNKQSVWESVKNRYEEEGLKNLNISQCTALTPPAVQALCDSCPALHTCPG 1440
            A+Y+L H+RVKNK ++WES+K RY+EEGLK+LNISQCTA+TPPAVQALCDS PALHTC G
Sbjct: 264  AMYSLVHNRVKNKPAMWESMKGRYDEEGLKSLNISQCTAITPPAVQALCDSFPALHTCSG 323

Query: 1441 RHSLIISGCLNLTSVHCACAVQAHRATNNV 1530
            RHSL++SGC NLTSVHCACAVQAH   +++
Sbjct: 324  RHSLVMSGCWNLTSVHCACAVQAHHTASSI 353


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