BLASTX nr result
ID: Bupleurum21_contig00002627
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00002627
(1755 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI34709.3| unnamed protein product [Vitis vinifera] 539 e-150
ref|XP_002276931.1| PREDICTED: uncharacterized protein LOC100265... 538 e-150
ref|XP_002509767.1| conserved hypothetical protein [Ricinus comm... 514 e-143
emb|CAN68047.1| hypothetical protein VITISV_017724 [Vitis vinifera] 495 e-137
ref|XP_002892714.1| S1 RNA-binding domain-containing protein [Ar... 493 e-137
>emb|CBI34709.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 539 bits (1388), Expect = e-150
Identities = 299/519 (57%), Positives = 371/519 (71%), Gaps = 5/519 (0%)
Frame = +1
Query: 85 KDVPEFAKQNNLELVEKSQIFDHDSEQGTSEDSAGSSSAKDTTVEIVSASEKSPDQSLEC 264
K +F+ L EK E+G+S S+ + A ++ + S ++ D S
Sbjct: 193 KKEAKFSDMTLLRKPEKLTKISIGIEEGSSSGSSEYTGAANSMNNDIEESLETRDDSFSM 252
Query: 265 ENASPLKSETLTELQPFQRNDL----GSDLKIAVTEASETICDGSNTNDSVKAVLH-KPE 429
L ++ LQP + +D+ + ++ A +E S S++A L KP+
Sbjct: 253 --GPELVDNSIIGLQPLEHSDIIDMGPAKVETAASEPSNRKSVDPKGKLSMEAALQGKPK 310
Query: 430 RLNQSMKRTSDVTRKEKVLVNTETYDSTIGLENQVTPPPLEERENIDWKRAEDLVKTGGR 609
RL QS+K S++++ E VL N E+Y +++ LEN + L+ E+ DW RAEDLVKTGGR
Sbjct: 311 RLEQSVKEMSNLSQPETVLANPESYGNSVELENFLATSSLKGHEDTDWSRAEDLVKTGGR 370
Query: 610 EEVEVISSSTRGFVVSFGSIIGFLPYRNLAAKHKFLAVESWLRRRGLDPSIYKQKLSIIG 789
EEVE+ISSSTRGFVVSFGS+IGFLPYRNLAAK KFLA ESWLRR+GLDPS+Y+Q L I+G
Sbjct: 371 EEVELISSSTRGFVVSFGSLIGFLPYRNLAAKWKFLAFESWLRRKGLDPSMYRQNLGIVG 430
Query: 790 SSELAAKDTAPISSIDVGNENKVNEDIPSSNKLEDLLMIYDQEKLKFLSSFIGQKFKVNV 969
S E+ A + +P ++ ++ +I + LEDLL IYDQEK+KFLSSF+GQK VNV
Sbjct: 431 SHEV-ANNPSPDANPGPEIHKQLEGEISPNMNLEDLLRIYDQEKIKFLSSFVGQKINVNV 489
Query: 970 LLAERESRRLILSXXXXXXXXXXXXXXXXMAKLSIGDIVKCCIKKITYFGIFVEVEGVPA 1149
++A+R++RRLI S MAKLSIGDIVKC IKKITYFGIFVEVEGVPA
Sbjct: 490 VMADRKTRRLIFSGRPKEKEEMVEKKRSLMAKLSIGDIVKCRIKKITYFGIFVEVEGVPA 549
Query: 1150 LIHQTEVSWDATLDPASYFKIGQVVEAKVHQIDFSGERIFLSLKNIMPDPVIEAMEAVVG 1329
L+HQTEVSWDATLDPASYFKIGQ+VEAKVHQ+DFS ERIFLSLK I PDP+IEA+E VVG
Sbjct: 550 LVHQTEVSWDATLDPASYFKIGQIVEAKVHQLDFSLERIFLSLKEITPDPLIEALEFVVG 609
Query: 1330 NRDSFGGDLAAAVADNEWADVESLIKELQQFEGIQAVSRGSFFLSPGLAPSFQVYMASMI 1509
+ + G L AA AD EW DVESLIKEL+Q EGIQ+VS+G FFLSPGLAP+FQVYMASM
Sbjct: 610 D-NPLDGRLEAAQADTEWPDVESLIKELEQIEGIQSVSKGRFFLSPGLAPTFQVYMASMF 668
Query: 1510 ENQYKLLARAGNRVQEVIVQSSLGKEDMKSAILTCTNRV 1626
ENQYKLLAR+GN+VQEVIV++SLGKEDMKSAILTCTNRV
Sbjct: 669 ENQYKLLARSGNKVQEVIVEASLGKEDMKSAILTCTNRV 707
>ref|XP_002276931.1| PREDICTED: uncharacterized protein LOC100265091 [Vitis vinifera]
Length = 773
Score = 538 bits (1385), Expect = e-150
Identities = 294/494 (59%), Positives = 364/494 (73%), Gaps = 5/494 (1%)
Frame = +1
Query: 160 EQGTSEDSAGSSSAKDTTVEIVSASEKSPDQSLECENASPLKSETLTELQPFQRNDL--- 330
E+G+S S+ + A ++ + S ++ D S L ++ LQP + +D+
Sbjct: 284 EEGSSSGSSEYTGAANSMNNDIEESLETRDDSFSM--GPELVDNSIIGLQPLEHSDIIDM 341
Query: 331 -GSDLKIAVTEASETICDGSNTNDSVKAVLH-KPERLNQSMKRTSDVTRKEKVLVNTETY 504
+ ++ A +E S S++A L KP+RL QS+K S++++ E VL N E+Y
Sbjct: 342 GPAKVETAASEPSNRKSVDPKGKLSMEAALQGKPKRLEQSVKEMSNLSQPETVLANPESY 401
Query: 505 DSTIGLENQVTPPPLEERENIDWKRAEDLVKTGGREEVEVISSSTRGFVVSFGSIIGFLP 684
+++ LEN + L+ E+ DW RAEDLVKTGGREEVE+ISSSTRGFVVSFGS+IGFLP
Sbjct: 402 GNSVELENFLATSSLKGHEDTDWSRAEDLVKTGGREEVELISSSTRGFVVSFGSLIGFLP 461
Query: 685 YRNLAAKHKFLAVESWLRRRGLDPSIYKQKLSIIGSSELAAKDTAPISSIDVGNENKVNE 864
YRNLAAK KFLA ESWLRR+GLDPS+Y+Q L I+GS E+ A + +P ++ ++
Sbjct: 462 YRNLAAKWKFLAFESWLRRKGLDPSMYRQNLGIVGSHEV-ANNPSPDANPGPEIHKQLEG 520
Query: 865 DIPSSNKLEDLLMIYDQEKLKFLSSFIGQKFKVNVLLAERESRRLILSXXXXXXXXXXXX 1044
+I + LEDLL IYDQEK+KFLSSF+GQK VNV++A+R++RRLI S
Sbjct: 521 EISPNMNLEDLLRIYDQEKIKFLSSFVGQKINVNVVMADRKTRRLIFSGRPKEKEEMVEK 580
Query: 1045 XXXXMAKLSIGDIVKCCIKKITYFGIFVEVEGVPALIHQTEVSWDATLDPASYFKIGQVV 1224
MAKLSIGDIVKC IKKITYFGIFVEVEGVPAL+HQTEVSWDATLDPASYFKIGQ+V
Sbjct: 581 KRSLMAKLSIGDIVKCRIKKITYFGIFVEVEGVPALVHQTEVSWDATLDPASYFKIGQIV 640
Query: 1225 EAKVHQIDFSGERIFLSLKNIMPDPVIEAMEAVVGNRDSFGGDLAAAVADNEWADVESLI 1404
EAKVHQ+DFS ERIFLSLK I PDP+IEA+E VVG+ + G L AA AD EW DVESLI
Sbjct: 641 EAKVHQLDFSLERIFLSLKEITPDPLIEALEFVVGD-NPLDGRLEAAQADTEWPDVESLI 699
Query: 1405 KELQQFEGIQAVSRGSFFLSPGLAPSFQVYMASMIENQYKLLARAGNRVQEVIVQSSLGK 1584
KEL+Q EGIQ+VS+G FFLSPGLAP+FQVYMASM ENQYKLLAR+GN+VQEVIV++SLGK
Sbjct: 700 KELEQIEGIQSVSKGRFFLSPGLAPTFQVYMASMFENQYKLLARSGNKVQEVIVEASLGK 759
Query: 1585 EDMKSAILTCTNRV 1626
EDMKSAILTCTNRV
Sbjct: 760 EDMKSAILTCTNRV 773
>ref|XP_002509767.1| conserved hypothetical protein [Ricinus communis]
gi|223549666|gb|EEF51154.1| conserved hypothetical
protein [Ricinus communis]
Length = 748
Score = 514 bits (1324), Expect = e-143
Identities = 288/526 (54%), Positives = 366/526 (69%), Gaps = 18/526 (3%)
Frame = +1
Query: 106 KQNNLELVEKSQIFDHDSEQGTSEDSAGSSSAKDTTVEIVSASEKSPDQSLECENASPLK 285
KQ +L+ E ++I + +E GT ++ + T ++ S D+S E +S K
Sbjct: 238 KQESLDGAE-TKISNGATELGTGKEEDDIKYSGFTLLKKPETSVSDVDESSETVGSSVPK 296
Query: 286 SETLTE-------------LQPFQRNDLGSDLKIAVTEASETICDGSNTNDSVK-----A 411
+ L +QP +++++G ++ D +DSVK
Sbjct: 297 EQELEVGIKKNSFLFCFEGMQPLEKSNIGP---------TDDQSDKKLVDDSVKFSVDTT 347
Query: 412 VLHKPERLNQSMKRTSDVTRKEKVLVNTETYDSTIGLENQVTPPPLEERENIDWKRAEDL 591
+ KP+RL+Q +K T TR+E L++ E+Y + L+N PP+ E+ DW RAEDL
Sbjct: 348 LQGKPKRLDQYVKETLASTREETTLLHPESYGNADELKNL---PPISPIEDADWSRAEDL 404
Query: 592 VKTGGREEVEVISSSTRGFVVSFGSIIGFLPYRNLAAKHKFLAVESWLRRRGLDPSIYKQ 771
KTG R EVE++S+STRGF+VSFGS++GFLPYRNL AK KFLA ESWL+++GLDPS+YKQ
Sbjct: 405 FKTGNRGEVELVSASTRGFIVSFGSLVGFLPYRNLVAKWKFLAFESWLKQKGLDPSMYKQ 464
Query: 772 KLSIIGSSELAAKDTAPISSIDVGNENKVNEDIPSSNKLEDLLMIYDQEKLKFLSSFIGQ 951
L IIGS ++ K+ SS D K+ +I + KLEDLL IYDQEKLKFLSSF+GQ
Sbjct: 465 NLGIIGSYDVLDKNFD--SSADQEINKKIGGEITPNMKLEDLLRIYDQEKLKFLSSFVGQ 522
Query: 952 KFKVNVLLAERESRRLILSXXXXXXXXXXXXXXXXMAKLSIGDIVKCCIKKITYFGIFVE 1131
K KVNV++A++ R+L S MAKL IGD+VKCCIKKITYFGIFVE
Sbjct: 523 KIKVNVVVADKILRKLTFSLRPKEKEESVQRKRNLMAKLQIGDVVKCCIKKITYFGIFVE 582
Query: 1132 VEGVPALIHQTEVSWDATLDPASYFKIGQVVEAKVHQIDFSGERIFLSLKNIMPDPVIEA 1311
VEGV ALIHQTEVSWDATLDPASYFK+GQ+VEAKVHQ+DF+ ERIFLSLK I PDP+IEA
Sbjct: 583 VEGVAALIHQTEVSWDATLDPASYFKVGQIVEAKVHQMDFTLERIFLSLKEITPDPLIEA 642
Query: 1312 MEAVVGNRDSFGGDLAAAVADNEWADVESLIKELQQFEGIQAVSRGSFFLSPGLAPSFQV 1491
+E+VVG+RDS G L AA AD+EWADVESLIKELQQ +GIQ+VS+G FFLSPGLAP+FQV
Sbjct: 643 LESVVGDRDSMDGRLQAAEADSEWADVESLIKELQQTKGIQSVSKGRFFLSPGLAPTFQV 702
Query: 1492 YMASMIENQYKLLARAGNRVQEVIVQSSLGKEDMKSAILTCTNRVK 1629
YMASM ENQYKLLAR+GN+VQEVIV++SL KE+MKS IL+CT RV+
Sbjct: 703 YMASMFENQYKLLARSGNKVQEVIVEASLDKEEMKSTILSCTYRVE 748
>emb|CAN68047.1| hypothetical protein VITISV_017724 [Vitis vinifera]
Length = 768
Score = 495 bits (1274), Expect = e-137
Identities = 275/469 (58%), Positives = 336/469 (71%), Gaps = 11/469 (2%)
Frame = +1
Query: 187 GSSSAKDTTVEIVSASEKSPDQSLECENAS-----PLKSETLTELQPFQRNDLGSDLKIA 351
GSSS ++ ++SLE + S L ++ LQP + +D+ D+ A
Sbjct: 286 GSSSGSSEYTGAANSMNNDIEESLETRDDSFSMGPELVDNSIIGLQPLEHSDI-IDMGPA 344
Query: 352 VTEASETICDGSNTND-----SVKAVLH-KPERLNQSMKRTSDVTRKEKVLVNTETYDST 513
E + + D S++A L KP+RL QS+K S +++ E VL N E+Y ++
Sbjct: 345 KVETXASEPSNXKSVDPKGKLSMEAALQGKPKRLEQSVKEMSXLSQPETVLANPESYGNS 404
Query: 514 IGLENQVTPPPLEERENIDWKRAEDLVKTGGREEVEVISSSTRGFVVSFGSIIGFLPYRN 693
+ LEN + L+ E+ DW RAEDLVKTGGREEVE+ISSSTRGFVVSFGS+IGFLPYRN
Sbjct: 405 VELENFLATSSLKGHEDTDWSRAEDLVKTGGREEVELISSSTRGFVVSFGSLIGFLPYRN 464
Query: 694 LAAKHKFLAVESWLRRRGLDPSIYKQKLSIIGSSELAAKDTAPISSIDVGNENKVNEDIP 873
LAAK KFLA ESWLRR+GLDPS+Y+Q L I+GS E+ A + +P ++ ++ I
Sbjct: 465 LAAKWKFLAFESWLRRKGLDPSMYRQNLGIVGSHEV-ANNPSPDANPGPEXHKQLEGXIS 523
Query: 874 SSNKLEDLLMIYDQEKLKFLSSFIGQKFKVNVLLAERESRRLILSXXXXXXXXXXXXXXX 1053
+ LEDLL IYDQEK+KFLSSF+GQK VNV++A+R++RRLI S
Sbjct: 524 PNMNLEDLLRIYDQEKIKFLSSFVGQKINVNVVMADRKTRRLIFSGRPKEKEEMVEKKRS 583
Query: 1054 XMAKLSIGDIVKCCIKKITYFGIFVEVEGVPALIHQTEVSWDATLDPASYFKIGQVVEAK 1233
MAKLSIGDIVKC IKKITYFGIFVEVEGVPAL+HQTEVSWDATLDPASYFKIGQ+VEAK
Sbjct: 584 LMAKLSIGDIVKCRIKKITYFGIFVEVEGVPALVHQTEVSWDATLDPASYFKIGQIVEAK 643
Query: 1234 VHQIDFSGERIFLSLKNIMPDPVIEAMEAVVGNRDSFGGDLAAAVADNEWADVESLIKEL 1413
VHQ+DFS ERIFLSLK I PDP+IEA+E VVG+ + G L AA AD EW DVESLIKEL
Sbjct: 644 VHQLDFSLERIFLSLKEITPDPLIEALEFVVGD-NPLDGRLEAAQADTEWPDVESLIKEL 702
Query: 1414 QQFEGIQAVSRGSFFLSPGLAPSFQVYMASMIENQYKLLARAGNRVQEV 1560
+Q EGIQ+VS+G FFLSPGLAP+FQVYMASM ENQYKLLAR+GN+VQEV
Sbjct: 703 EQIEGIQSVSKGRFFLSPGLAPTFQVYMASMFENQYKLLARSGNKVQEV 751
>ref|XP_002892714.1| S1 RNA-binding domain-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297338556|gb|EFH68973.1| S1 RNA-binding
domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 768
Score = 493 bits (1268), Expect = e-137
Identities = 280/548 (51%), Positives = 363/548 (66%), Gaps = 8/548 (1%)
Frame = +1
Query: 10 EQGTPEDFSGSSSVKDLTAEFVSPSKDVPEFAKQNNLELVEKSQIFDHDSEQGTS----- 174
E+G ED + S E S +++ E + + VE S+I ++ ++ +
Sbjct: 244 EEGGQEDVTYSEYTLLEKPEARSKPENIKE--EVGDSRAVESSEIENNSIQKPEARPEPE 301
Query: 175 --EDSAGSSSAKDTTVEIVSASEKSPDQSLECENASPLKSETLTELQPFQRNDLGSDLKI 348
+++ G S A +++ EI + S + + L CE +S E P + KI
Sbjct: 302 NVDNNVGDSGAMESS-EIENNSIPT-EMQLNCERSSGSSEERTINSDPIE--------KI 351
Query: 349 AVTEASETICDGSNTNDSVKAVLHKPERLNQSMKRTSDVTRKEKVLVNTETYDSTIGLEN 528
S+TI + S + KP+RL+ S S + + ++VN E ++ L+
Sbjct: 352 LSKPISQTIVEAS--------LQGKPQRLDPSSVEPSVSDKGQPLIVNHEGRQVSVELKG 403
Query: 529 QVTPPPLEERENIDWKRAEDLVKTGGREEVEVISSSTRGFVVSFGSIIGFLPYRNLAAKH 708
T LEE DW AE LVKT R +VE+ISSSTRGF VS+GS+IGFLPYRNLAAK
Sbjct: 404 PPTRSSLEEN---DWNEAESLVKTELRADVELISSSTRGFAVSYGSLIGFLPYRNLAAKW 460
Query: 709 KFLAVESWLRRRGLDPSIYKQKLSIIGSSELAAKDTAPISSIDVGNENKVNEDIPSSNKL 888
KFLA ESWLRR+G+DPS+Y+Q L +IG ++ +K +P SS+D +N ++ S KL
Sbjct: 461 KFLAFESWLRRKGVDPSLYRQNLGVIGGQDVTSKAPSPDSSLDSEVATSINGEVSSDMKL 520
Query: 889 EDLLMIYDQEKLKFLSSFIGQKFKVNVLLAERESRRLILSXXXXXXXXXXXXXXXXMAKL 1068
EDLLM+YD+EK KFLSSF+GQK KVNV++A R SR+LI S MAKL
Sbjct: 521 EDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRNLMAKL 580
Query: 1069 SIGDIVKCCIKKITYFGIFVEVEGVPALIHQTEVSWDATLDPASYFKIGQVVEAKVHQID 1248
+GD+VKCCIKKITYFGIF E+EGVPAL+HQ+EVSWDATLDPASYFKIGQ+VEAKVHQ+D
Sbjct: 581 RVGDVVKCCIKKITYFGIFCELEGVPALVHQSEVSWDATLDPASYFKIGQIVEAKVHQLD 640
Query: 1249 FSGERIFLSLKNIMPDPVIEAMEAVV-GNRDSFGGDLAAAVADNEWADVESLIKELQQFE 1425
F+ ERIFLSLK I PDP+ EA+E+VV G+ D GG L AA D EW DVESLIKEL+ E
Sbjct: 641 FALERIFLSLKEITPDPLTEALESVVGGDNDQLGGRLQAAELDAEWPDVESLIKELEMVE 700
Query: 1426 GIQAVSRGSFFLSPGLAPSFQVYMASMIENQYKLLARAGNRVQEVIVQSSLGKEDMKSAI 1605
GIQ+VS+ FFLSPGLAP+FQVYMA M +NQYKLLARAGNRVQE+IV++SL KE+MKS I
Sbjct: 701 GIQSVSKSRFFLSPGLAPTFQVYMAPMFKNQYKLLARAGNRVQELIVEASLSKEEMKSTI 760
Query: 1606 LTCTNRVK 1629
++CTNRV+
Sbjct: 761 MSCTNRVE 768