BLASTX nr result

ID: Bupleurum21_contig00002608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002608
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522001.1| conserved hypothetical protein [Ricinus comm...   327   2e-87
ref|XP_002319663.1| chromatin remodeling complex subunit [Populu...   318   1e-84
ref|XP_002263799.2| PREDICTED: uncharacterized protein LOC100244...   316   5e-84
emb|CBI22318.3| unnamed protein product [Vitis vinifera]              316   5e-84
gb|AAF99756.1|AC003981_6 F22O13.8 [Arabidopsis thaliana]              300   3e-79

>ref|XP_002522001.1| conserved hypothetical protein [Ricinus communis]
           gi|223538805|gb|EEF40405.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1447

 Score =  327 bits (839), Expect = 2e-87
 Identities = 162/247 (65%), Positives = 203/247 (82%), Gaps = 4/247 (1%)
 Frame = +1

Query: 187 SKAAEAQESLEDESLAKVEAEVREELAQSYDGDELEKAVMDEIEAFKEEWETVLDDLETD 366
           SKAAEAQE+LE ESL+KVE+EVREEL QS  GD+LE AV DE+ AFKEEWETVLD+LET+
Sbjct: 74  SKAAEAQEALEKESLSKVESEVREELGQSLHGDDLEAAVEDEMTAFKEEWETVLDELETE 133

Query: 367 CANLLEQLEGAGIELPSLYKWIESQAPESCSTETWKRRTHWVGSRVTDDVTESIADAEKY 546
            A+LLEQL+GAGIELPSLYKWIE QAP  C TE WK R HWVGS+VT ++TE++ADAEKY
Sbjct: 134 SAHLLEQLDGAGIELPSLYKWIERQAPNGCQTEAWKSRAHWVGSQVTSEITEAVADAEKY 193

Query: 547 LQTHRPVRKKLGKVLEEGASGFLEKKIACSNGMEGLGKSSDVDWSSFNKIFTSSSKN--T 720
           LQ+HRPVR++ GK+LEEGASGFL+KK++     + + ++ D+DW S NK+F+S S     
Sbjct: 194 LQSHRPVRRRHGKLLEEGASGFLDKKLSIDGTKDNVAENGDIDWDSLNKLFSSGSCKDVA 253

Query: 721 SFGSNQWASVYLASTPQQAAELGIKFPGVDEVEEIDDLEG-SSTFLISEAIITE-DINLT 894
           SFGS  WASVYLA+TPQ+AAE+G+KFPGVDEVEEI+D++G S+   I+ AI  E ++ L+
Sbjct: 254 SFGSKHWASVYLANTPQEAAEMGLKFPGVDEVEEIEDIDGCSNDPFIAVAIANEKELILS 313

Query: 895 EEQKKNY 915
           EEQ+KNY
Sbjct: 314 EEQRKNY 320


>ref|XP_002319663.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222858039|gb|EEE95586.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1404

 Score =  318 bits (816), Expect = 1e-84
 Identities = 158/247 (63%), Positives = 205/247 (82%), Gaps = 4/247 (1%)
 Frame = +1

Query: 187 SKAAEAQESLEDESLAKVEAEVREELAQSYDGDELEKAVMDEIEAFKEEWETVLDDLETD 366
           SKAAEAQE+LE ESLAKVE++VREELA+S  GD+LE AV DE+  F+EEWE VLD+LET+
Sbjct: 21  SKAAEAQEALEKESLAKVESDVREELARSLQGDDLEAAVEDEMATFREEWENVLDELETE 80

Query: 367 CANLLEQLEGAGIELPSLYKWIESQAPESCSTETWKRRTHWVGSRVTDDVTESIADAEKY 546
             +LLEQL+G GIELP+LYKWIESQAP SC TE WKRR HWVG+++T + T+++ADAEKY
Sbjct: 81  SYHLLEQLDGTGIELPNLYKWIESQAPNSCCTEAWKRRAHWVGTQMTKETTDTVADAEKY 140

Query: 547 LQTHRPVRKKLGKVLEEGASGFLEKKIACSNGMEGLGKSSDVDWSSFNKIFTSSSKN--T 720
           LQ HRPVR+K GK+LEEGASGFL+KK+A  +G E + ++ +VDW+S  K+F++SS     
Sbjct: 141 LQIHRPVRRKHGKLLEEGASGFLQKKLA-MDGSEAIAENREVDWASMKKLFSTSSSEDVA 199

Query: 721 SFGSNQWASVYLASTPQQAAELGIKFPGVDEVEEIDDLEGSSTF-LISEAIITE-DINLT 894
           SFGS  WASVYLA+TPQ+AA +G+KFPGV+EVEEI+D++G+ST   ++EAI  E ++ L+
Sbjct: 200 SFGSKHWASVYLANTPQEAALMGLKFPGVNEVEEIEDIDGNSTDPFVAEAIANEKELVLS 259

Query: 895 EEQKKNY 915
           EEQ+KNY
Sbjct: 260 EEQRKNY 266


>ref|XP_002263799.2| PREDICTED: uncharacterized protein LOC100244360 [Vitis vinifera]
          Length = 1507

 Score =  316 bits (810), Expect = 5e-84
 Identities = 159/247 (64%), Positives = 200/247 (80%), Gaps = 4/247 (1%)
 Frame = +1

Query: 187 SKAAEAQESLEDESLAKVEAEVREELAQSYDGDELEKAVMDEIEAFKEEWETVLDDLETD 366
           SKAAEAQESLE+ESL+K+E EVREELAQ+  G++LE AV +E+  FKEEWE VLD+LET+
Sbjct: 60  SKAAEAQESLEEESLSKLEIEVREELAQTLQGNDLETAVAEEMANFKEEWEAVLDELETE 119

Query: 367 CANLLEQLEGAGIELPSLYKWIESQAPESCSTETWKRRTHWVGSRVTDDVTESIADAEKY 546
            A+LLEQL+GAGIELPSLYKWIESQAP  C TE WK+R HW+GS+VT D TESI +AEK+
Sbjct: 120 SAHLLEQLDGAGIELPSLYKWIESQAPNGCCTEAWKQRVHWIGSQVTGDTTESIIEAEKH 179

Query: 547 LQTHRPVRKKLGKVLEEGASGFLEKKIACSNGMEGLGKSSDVDWSSFNKIFT--SSSKNT 720
           LQT RPVR++ GK+LEEGASG+L  K+A     E + ++++VDW SFNK F+  +S  +T
Sbjct: 180 LQTDRPVRRRHGKLLEEGASGYLANKLASDGNREAVTENAEVDWCSFNKCFSDHASEDST 239

Query: 721 SFGSNQWASVYLASTPQQAAELGIKFPGVDEVEEIDDLEG-SSTFLISEAIITE-DINLT 894
            FGS  WASVYLASTPQQAA +G+KFPGVDEVEEIDD++G SS   +++AI  E  ++L+
Sbjct: 240 LFGSEHWASVYLASTPQQAAVMGLKFPGVDEVEEIDDIDGNSSDPFVADAIANERAVDLS 299

Query: 895 EEQKKNY 915
           EEQKK +
Sbjct: 300 EEQKKKF 306


>emb|CBI22318.3| unnamed protein product [Vitis vinifera]
          Length = 1477

 Score =  316 bits (810), Expect = 5e-84
 Identities = 159/247 (64%), Positives = 200/247 (80%), Gaps = 4/247 (1%)
 Frame = +1

Query: 187 SKAAEAQESLEDESLAKVEAEVREELAQSYDGDELEKAVMDEIEAFKEEWETVLDDLETD 366
           SKAAEAQESLE+ESL+K+E EVREELAQ+  G++LE AV +E+  FKEEWE VLD+LET+
Sbjct: 32  SKAAEAQESLEEESLSKLEIEVREELAQTLQGNDLETAVAEEMANFKEEWEAVLDELETE 91

Query: 367 CANLLEQLEGAGIELPSLYKWIESQAPESCSTETWKRRTHWVGSRVTDDVTESIADAEKY 546
            A+LLEQL+GAGIELPSLYKWIESQAP  C TE WK+R HW+GS+VT D TESI +AEK+
Sbjct: 92  SAHLLEQLDGAGIELPSLYKWIESQAPNGCCTEAWKQRVHWIGSQVTGDTTESIIEAEKH 151

Query: 547 LQTHRPVRKKLGKVLEEGASGFLEKKIACSNGMEGLGKSSDVDWSSFNKIFT--SSSKNT 720
           LQT RPVR++ GK+LEEGASG+L  K+A     E + ++++VDW SFNK F+  +S  +T
Sbjct: 152 LQTDRPVRRRHGKLLEEGASGYLANKLASDGNREAVTENAEVDWCSFNKCFSDHASEDST 211

Query: 721 SFGSNQWASVYLASTPQQAAELGIKFPGVDEVEEIDDLEG-SSTFLISEAIITE-DINLT 894
            FGS  WASVYLASTPQQAA +G+KFPGVDEVEEIDD++G SS   +++AI  E  ++L+
Sbjct: 212 LFGSEHWASVYLASTPQQAAVMGLKFPGVDEVEEIDDIDGNSSDPFVADAIANERAVDLS 271

Query: 895 EEQKKNY 915
           EEQKK +
Sbjct: 272 EEQKKKF 278


>gb|AAF99756.1|AC003981_6 F22O13.8 [Arabidopsis thaliana]
          Length = 1471

 Score =  300 bits (769), Expect = 3e-79
 Identities = 152/246 (61%), Positives = 196/246 (79%), Gaps = 3/246 (1%)
 Frame = +1

Query: 187 SKAAEAQESLEDESLAKVEAEVREELAQSYDGDELEKAVMDEIEAFKEEWETVLDDLETD 366
           SKAAEAQE+LE ESL+KVE+EVREELAQ+  GDEL++AV  E+  FK+EWE  LD+LET+
Sbjct: 125 SKAAEAQEALEKESLSKVESEVREELAQALRGDELDEAVAAEMMTFKDEWEATLDELETE 184

Query: 367 CANLLEQLEGAGIELPSLYKWIESQAPESCSTETWKRRTHWVGSRVTDDVTESIADAEKY 546
            A LLEQL+GAGIELP LY+ IESQAP  C TE WK+R HWVG++VT +  ES+A+AE++
Sbjct: 185 SATLLEQLDGAGIELPKLYEMIESQAPNGCYTEAWKQRAHWVGTQVTKETVESLANAERF 244

Query: 547 LQTHRPVRKKLGKVLEEGASGFLEKKIACSNGMEGLGKSSDVDWSSFNKIFTSS-SKNTS 723
           L THRPVRK+ GK+LEEGASGFLEKK+A     E L  +S++DWSS NK+F+    ++ S
Sbjct: 245 LHTHRPVRKRHGKLLEEGASGFLEKKLADGAVKESLAGTSELDWSSLNKVFSEKRDESVS 304

Query: 724 FGSNQWASVYLASTPQQAAELGIKFPGVDEVEEIDDLEGS-STFLISEAIITE-DINLTE 897
           FGS QWASVYLASTP QAA +G++FPGV+EVEEI++++ S +   +++AI  E ++ LTE
Sbjct: 305 FGSKQWASVYLASTPHQAAAMGLEFPGVNEVEEIEEIDASLADPFLADAIDNERELALTE 364

Query: 898 EQKKNY 915
           EQK NY
Sbjct: 365 EQKTNY 370


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