BLASTX nr result

ID: Bupleurum21_contig00002590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002590
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32261.3| unnamed protein product [Vitis vinifera]               89   1e-15
ref|XP_002268490.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    89   1e-15
ref|XP_002320364.1| predicted protein [Populus trichocarpa] gi|2...    77   6e-12
ref|XP_002520678.1| hypothetical protein RCOM_0555710 [Ricinus c...    74   6e-11
ref|XP_003521534.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    69   2e-09

>emb|CBI32261.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 56/125 (44%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
 Frame = -2

Query: 906 ASAFKMCPDATGEDAGRGLPSTPSQNLIDWK--VPDENTEIGQCLHQGNNGHQTQAENSV 733
           ASAF+ C D + E A + LPS    +  D K  VP ++++IG  +   N   + ++E  V
Sbjct: 220 ASAFQWCSDGS-EAANQVLPSVLLGSCADEKCLVPRKHSDIGGSVSHTNGSDEGKSECPV 278

Query: 732 IVGVTQIQPKVAPRELTSQERDEAITXXXXXXXXXXXXKQIRYESRKIRAESRVRIKGRF 553
           +       PKV+  EL SQERD AI+            K IRYESRK RAESR+RIKGRF
Sbjct: 279 VTKTLPALPKVSVHELNSQERDSAISRYKEKKKTRRYEKHIRYESRKARAESRIRIKGRF 338

Query: 552 AKMDH 538
           AKMDH
Sbjct: 339 AKMDH 343


>ref|XP_002268490.1| PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform 1
           [Vitis vinifera]
          Length = 394

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 56/125 (44%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
 Frame = -2

Query: 906 ASAFKMCPDATGEDAGRGLPSTPSQNLIDWK--VPDENTEIGQCLHQGNNGHQTQAENSV 733
           ASAF+ C D + E A + LPS    +  D K  VP ++++IG  +   N   + ++E  V
Sbjct: 271 ASAFQWCSDGS-EAANQVLPSVLLGSCADEKCLVPRKHSDIGGSVSHTNGSDEGKSECPV 329

Query: 732 IVGVTQIQPKVAPRELTSQERDEAITXXXXXXXXXXXXKQIRYESRKIRAESRVRIKGRF 553
           +       PKV+  EL SQERD AI+            K IRYESRK RAESR+RIKGRF
Sbjct: 330 VTKTLPALPKVSVHELNSQERDSAISRYKEKKKTRRYEKHIRYESRKARAESRIRIKGRF 389

Query: 552 AKMDH 538
           AKMDH
Sbjct: 390 AKMDH 394


>ref|XP_002320364.1| predicted protein [Populus trichocarpa] gi|222861137|gb|EEE98679.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 49/115 (42%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
 Frame = -2

Query: 873 GEDAGR-GLPST-PSQNLIDWK-VPDENTEIGQCLHQGNNGHQTQAENSVIVGVTQIQPK 703
           GE A +   PST P  N  + + VP++   I       N+GH+ + + S I G   + P 
Sbjct: 4   GEAANQVSFPSTLPGSNFEESRAVPEKEFNISDSASHINDGHEAEPQPSTI-GTLPVLPN 62

Query: 702 VAPRELTSQERDEAITXXXXXXXXXXXXKQIRYESRKIRAESRVRIKGRFAKMDH 538
               EL+SQERD AI+            K+IRYESRK+RA+SR RIKGRFAK+DH
Sbjct: 63  DGTHELSSQERDSAISRYKEKKQTRRYDKRIRYESRKVRADSRTRIKGRFAKLDH 117


>ref|XP_002520678.1| hypothetical protein RCOM_0555710 [Ricinus communis]
           gi|223540063|gb|EEF41640.1| hypothetical protein
           RCOM_0555710 [Ricinus communis]
          Length = 411

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 39/91 (42%), Positives = 50/91 (54%)
 Frame = -2

Query: 813 VPDENTEIGQCLHQGNNGHQTQAENSVIVGVTQIQPKVAPRELTSQERDEAITXXXXXXX 634
           VPD+ + I       N  H+ + +     G+  + PKV   ++ SQERD AI+       
Sbjct: 320 VPDKQSNIDGSASYANGSHEGEPQYPASTGLISVFPKVVSHDINSQERDSAISRYKEKRK 379

Query: 633 XXXXXKQIRYESRKIRAESRVRIKGRFAKMD 541
                K IRYESRK RAESR RI+GRFAKMD
Sbjct: 380 TRRYDKHIRYESRKARAESRTRIRGRFAKMD 410


>ref|XP_003521534.1| PREDICTED: zinc finger protein CONSTANS-LIKE 13-like [Glycine max]
          Length = 349

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
 Frame = -2

Query: 852 LPSTPSQNLIDWKVPDENTE--IGQCLHQGNNGHQTQAENSVIVGVTQIQPKVAPRELTS 679
           +P  P       ++P +++   +G+    G+NG +     S+        PK A  ELTS
Sbjct: 243 VPPDPLMRTYTEEIPFKHSTSAVGETQTYGDNGGKPSI--SLKSETLSTTPKAAACELTS 300

Query: 678 QERDEAITXXXXXXXXXXXXKQIRYESRKIRAESRVRIKGRFAKMDH 538
           QERD A+             K IRYESRK+RAESRVR+KGRFAKM+H
Sbjct: 301 QERDSALLRYKQKKKTRRFDKHIRYESRKVRAESRVRVKGRFAKMEH 347


Top