BLASTX nr result

ID: Bupleurum21_contig00002533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002533
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266937.1| PREDICTED: fasciclin-like arabinogalactan pr...   136   3e-30
ref|XP_004144534.1| PREDICTED: fasciclin-like arabinogalactan pr...   123   2e-26
gb|AAT37955.1| fasciclin-like AGP 12 [Populus tremula x Populus ...   123   3e-26
ref|XP_002532284.1| conserved hypothetical protein [Ricinus comm...   122   7e-26
ref|XP_003618017.1| Fasciclin-like arabinogalactan protein [Medi...   121   1e-25

>ref|XP_002266937.1| PREDICTED: fasciclin-like arabinogalactan protein 7 isoform 2
           [Vitis vinifera] gi|225446997|ref|XP_002266986.1|
           PREDICTED: fasciclin-like arabinogalactan protein 7
           isoform 3 [Vitis vinifera]
           gi|225446999|ref|XP_002266893.1| PREDICTED:
           fasciclin-like arabinogalactan protein 7 isoform 1
           [Vitis vinifera] gi|147823112|emb|CAN73020.1|
           hypothetical protein VITISV_004046 [Vitis vinifera]
          Length = 254

 Score =  136 bits (342), Expect = 3e-30
 Identities = 66/74 (89%), Positives = 70/74 (94%)
 Frame = -1

Query: 609 YSLADFKNLSQASPISTFAGGAYTLNFTDNSGSVLVGTGWTNTKVSSSVHSTDPVAVYQV 430
           YSLADFKNLSQ SP+STFAGG YTLNFTD SG+V +G+GWTNTKVSSSVHSTDPVAVYQV
Sbjct: 120 YSLADFKNLSQLSPVSTFAGGQYTLNFTDVSGTVHIGSGWTNTKVSSSVHSTDPVAVYQV 179

Query: 429 DKVLLPEAIFGTDI 388
           DKVLLPEAIFGTDI
Sbjct: 180 DKVLLPEAIFGTDI 193


>ref|XP_004144534.1| PREDICTED: fasciclin-like arabinogalactan protein 7-like [Cucumis
           sativus] gi|449515965|ref|XP_004165018.1| PREDICTED:
           fasciclin-like arabinogalactan protein 7-like [Cucumis
           sativus]
          Length = 255

 Score =  123 bits (309), Expect = 2e-26
 Identities = 58/74 (78%), Positives = 68/74 (91%)
 Frame = -1

Query: 609 YSLADFKNLSQASPISTFAGGAYTLNFTDNSGSVLVGTGWTNTKVSSSVHSTDPVAVYQV 430
           YSLA+F+NLS  +PI TFAGG Y+LNFTD SG++ +G+GWTNTKVSSSVHS+DPVAVYQV
Sbjct: 122 YSLAEFRNLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQV 181

Query: 429 DKVLLPEAIFGTDI 388
           DK+LLPEAIFGTDI
Sbjct: 182 DKLLLPEAIFGTDI 195


>gb|AAT37955.1| fasciclin-like AGP 12 [Populus tremula x Populus alba]
          Length = 262

 Score =  123 bits (308), Expect = 3e-26
 Identities = 61/75 (81%), Positives = 67/75 (89%), Gaps = 1/75 (1%)
 Frame = -1

Query: 609 YSLADFKNLSQASPISTFAG-GAYTLNFTDNSGSVLVGTGWTNTKVSSSVHSTDPVAVYQ 433
           YSL+DFKNLSQ SP+STFAG G Y LNFTD SG+V + +GW+ TKVSSSVHSTDPVAVYQ
Sbjct: 125 YSLSDFKNLSQVSPVSTFAGAGRYALNFTDTSGTVQLDSGWSKTKVSSSVHSTDPVAVYQ 184

Query: 432 VDKVLLPEAIFGTDI 388
           VDKVLLPEAIFGTDI
Sbjct: 185 VDKVLLPEAIFGTDI 199


>ref|XP_002532284.1| conserved hypothetical protein [Ricinus communis]
           gi|223528018|gb|EEF30099.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score =  122 bits (305), Expect = 7e-26
 Identities = 61/75 (81%), Positives = 67/75 (89%), Gaps = 1/75 (1%)
 Frame = -1

Query: 609 YSLADFKNLSQASPISTFAG-GAYTLNFTDNSGSVLVGTGWTNTKVSSSVHSTDPVAVYQ 433
           YSLA+FKNLSQ SP+STFAG G Y LNFTD SG+V + +GWT TKVSSSVHSTDPVA+YQ
Sbjct: 126 YSLAEFKNLSQLSPVSTFAGAGEYALNFTDVSGTVHLDSGWTKTKVSSSVHSTDPVAIYQ 185

Query: 432 VDKVLLPEAIFGTDI 388
           VDKVLLPEAIFGTDI
Sbjct: 186 VDKVLLPEAIFGTDI 200


>ref|XP_003618017.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|355519352|gb|AET00976.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
           gi|388498250|gb|AFK37191.1| unknown [Medicago
           truncatula]
          Length = 262

 Score =  121 bits (303), Expect = 1e-25
 Identities = 57/74 (77%), Positives = 66/74 (89%)
 Frame = -1

Query: 609 YSLADFKNLSQASPISTFAGGAYTLNFTDNSGSVLVGTGWTNTKVSSSVHSTDPVAVYQV 430
           YSLADFKNLSQ +   TFAGG YTLNFTDNSG+V + +GW+ TKV+S+VH+TDPVA+YQV
Sbjct: 125 YSLADFKNLSQTASTPTFAGGDYTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQV 184

Query: 429 DKVLLPEAIFGTDI 388
           DKVLLPEAIFGTDI
Sbjct: 185 DKVLLPEAIFGTDI 198


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