BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002506
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272136.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   140   1e-31
sp|Q6R567.1|RMA1_CAPAN RecName: Full=E3 ubiquitin-protein ligase...   137   7e-31
ref|XP_002330679.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_004136822.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   126   2e-27
ref|XP_002329420.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27

>ref|XP_002272136.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 2 [Vitis
           vinifera] gi|225446339|ref|XP_002272107.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1-like isoform 1 [Vitis
           vinifera]
          Length = 260

 Score =  140 bits (352), Expect = 1e-31
 Identities = 61/107 (57%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
 Frame = -1

Query: 320 MGQYFQETTMLSE-TQSDGTSVQKCNSSSVTKDQIEQGTTGCFDCNICLDFVHDPVVTFC 144
           M QYFQE    ++  + DG+S++     S   +  ++ + G FDCNICLDFV DPVVT C
Sbjct: 1   MEQYFQEAMPQNDLNKEDGSSMENWKPVSAADNGSDKNSYGGFDCNICLDFVQDPVVTLC 60

Query: 143 GHLYCWPCIYKWIHYQSVSAEKLDHQQPQCPVCKAEVSKETLVPLYG 3
           GHL+CWPCIYKW+H+QS+S E  D + PQCPVCKAEVS  TL+PLYG
Sbjct: 61  GHLFCWPCIYKWLHFQSISTENPDQKHPQCPVCKAEVSDTTLIPLYG 107


>sp|Q6R567.1|RMA1_CAPAN RecName: Full=E3 ubiquitin-protein ligase RMA1H1; AltName:
           Full=Protein RING membrane-anchor 1 homolog 1
           gi|41059804|gb|AAR99376.1| ring domain containing
           protein [Capsicum annuum]
          Length = 252

 Score =  137 bits (346), Expect = 7e-31
 Identities = 55/75 (73%), Positives = 67/75 (89%)
 Frame = -1

Query: 227 DQIEQGTTGCFDCNICLDFVHDPVVTFCGHLYCWPCIYKWIHYQSVSAEKLDHQQPQCPV 48
           D++E+  +G FDCNICLD VH+PV+T CGHLYCWPCIYKWI++QSVS+E  D QQPQCPV
Sbjct: 29  DEVEENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQQQPQCPV 88

Query: 47  CKAEVSKETLVPLYG 3
           CKAEVS++TL+PLYG
Sbjct: 89  CKAEVSEKTLIPLYG 103


>ref|XP_002330679.1| predicted protein [Populus trichocarpa] gi|222872283|gb|EEF09414.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/110 (57%), Positives = 77/110 (70%), Gaps = 2/110 (1%)
 Frame = -1

Query: 326 MAMGQYFQETTMLSE-TQSDGTSVQKCNSSSVTKDQIEQGTTGCFDCNICLDFVHDPVVT 150
           MA+ QY +ET   ++  + D  S+    S S T    +   +  FDCNICLD VHDPVVT
Sbjct: 1   MALDQYMEETMAQNDYNREDKPSLPNWKSVSETVIDSDDSRSSGFDCNICLDSVHDPVVT 60

Query: 149 FCGHLYCWPCIYKWIHYQSVSAEKLD-HQQPQCPVCKAEVSKETLVPLYG 3
            CGHLYCWPCIYKW+H+QS+SAE  D H Q QCPVCKAEVS+ T+VPL+G
Sbjct: 61  LCGHLYCWPCIYKWLHFQSISAENQDQHPQQQCPVCKAEVSQSTIVPLFG 110


>ref|XP_004136822.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis
           sativus] gi|449479008|ref|XP_004155479.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1-like [Cucumis sativus]
          Length = 239

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
 Frame = -1

Query: 326 MAMGQYFQETTM-LSETQSDGTSVQKCNSSSVTKDQIEQGTTGCFDCNICLDFVHDPVVT 150
           M M QYF+E ++ ++    + +S++   S      +     +G FDCNICL+ V DPVVT
Sbjct: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60

Query: 149 FCGHLYCWPCIYKWIHYQSVSAEKLDHQQPQCPVCKAEVSKETLVPLYG 3
            CGHL+CWPCIYKWIHYQ  S EK   + PQCPVCKAEVS  TLVPLYG
Sbjct: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYG 109


>ref|XP_002329420.1| predicted protein [Populus trichocarpa] gi|222870470|gb|EEF07601.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/110 (54%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
 Frame = -1

Query: 326 MAMGQYFQETTMLSETQSD-GTSVQKCNSSSVTKDQIEQGTTGCFDCNICLDFVHDPVVT 150
           MA  QY +ET   ++   +   S+ K      T    ++  +  FDCNICLD V DPVVT
Sbjct: 1   MATEQYLEETVAQNDYNREYKPSLLKWKPIPKTAIDSDESPSNGFDCNICLDSVQDPVVT 60

Query: 149 FCGHLYCWPCIYKWIHYQSVSAEKLDHQ-QPQCPVCKAEVSKETLVPLYG 3
            CGHLYCWPCIYKW+H QS+SAE  D Q Q QCPVCKAEVS+ T+VPL+G
Sbjct: 61  LCGHLYCWPCIYKWLHSQSISAENQDQQPQQQCPVCKAEVSQSTIVPLFG 110